RNA–Protein interactions for RNA: ENST00000540057.1

C2CD3-214, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 4

Gene C2CD3, Length 556 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-214ENST00000540057 IGFBP6P24592 240 aaPredicted RBP4.52□□□□□ -1.69
C2CD3-214ENST00000540057 ARL4AP40617 200 aa4.52□□□□□ -1.69
C2CD3-214ENST00000540057 NOVP48745 357 aa4.52□□□□□ -1.69
C2CD3-214ENST00000540057 TDO2P48775 406 aa4.52□□□□□ -1.69
C2CD3-214ENST00000540057 SARSP49591 514 aaKnown RBP4.52□□□□□ -1.69
C2CD3-214ENST00000540057 CYP4F8P98187 520 aa4.52□□□□□ -1.69
C2CD3-214ENST00000540057 CSTF1Q05048 431 aaKnown RBP4.52□□□□□ -1.69
C2CD3-214ENST00000540057 USH1GQ495M9 461 aa4.52□□□□□ -1.69
C2CD3-214ENST00000540057 ANKRD39Q53RE8 183 aa4.52□□□□□ -1.69
C2CD3-214ENST00000540057 FAM102BQ5T8I3 360 aa4.52□□□□□ -1.69
C2CD3-214ENST00000540057 ARHGEF16Q5VV41 709 aa4.52□□□□□ -1.69
C2CD3-214ENST00000540057 TAF2Q6P1X5 1199 aa4.52□□□□□ -1.69
C2CD3-214ENST00000540057 UNQ6494/PRO21346Q6UXR6 183 aa4.52□□□□□ -1.69
C2CD3-214ENST00000540057 TMC5Q6UXY8 1006 aa4.52□□□□□ -1.69
C2CD3-214ENST00000540057 UNC5AQ6ZN44 842 aa4.52□□□□□ -1.69
C2CD3-214ENST00000540057 CCDC149Q6ZUS6 474 aa4.52□□□□□ -1.69
C2CD3-214ENST00000540057 OTOP3Q7RTS5 596 aa4.52□□□□□ -1.69
C2CD3-214ENST00000540057 LSRQ86X29 649 aaPredicted RBP4.52□□□□□ -1.69
C2CD3-214ENST00000540057 SLC44A3Q8N4M1 653 aa4.52□□□□□ -1.69
C2CD3-214ENST00000540057 MRPL43Q8N983 215 aaKnown RBP4.52□□□□□ -1.69
C2CD3-214ENST00000540057 DNAJB3Q8WWF6 145 aa4.52□□□□□ -1.69
C2CD3-214ENST00000540057 ATRIPQ8WXE1 791 aa4.52□□□□□ -1.69
C2CD3-214ENST00000540057 NELL1Q92832 810 aa4.52□□□□□ -1.69
C2CD3-214ENST00000540057 DHRS1Q96LJ7 313 aa4.52□□□□□ -1.69
C2CD3-214ENST00000540057 RMDN3Q96TC7 470 aa4.52□□□□□ -1.69
C2CD3-214ENST00000540057 GPR20Q99678 358 aa4.52□□□□□ -1.69
C2CD3-214ENST00000540057 TM9SF2Q99805 663 aa4.52□□□□□ -1.69
C2CD3-214ENST00000540057 DSCC1Q9BVC3 393 aa4.52□□□□□ -1.69
C2CD3-214ENST00000540057 FTHL17Q9BXU8 183 aa4.52□□□□□ -1.69
C2CD3-214ENST00000540057 TMX1Q9H3N1 280 aa4.52□□□□□ -1.69
C2CD3-214ENST00000540057 BCAS3Q9H6U6 928 aa4.52□□□□□ -1.69
C2CD3-214ENST00000540057 MLXIPQ9HAP2 919 aa4.52□□□□□ -1.69
C2CD3-214ENST00000540057 PXMP2Q9NR77 195 aa4.52□□□□□ -1.69
C2CD3-214ENST00000540057 METTL5Q9NRN9 209 aaKnown RBP4.52□□□□□ -1.69
C2CD3-214ENST00000540057 ZSCAN32Q9NX65 697 aa4.52□□□□□ -1.69
C2CD3-214ENST00000540057 PUF60Q9UHX1 559 aaKnown RBP4.52□□□□□ -1.69
C2CD3-214ENST00000540057 GMEB2Q9UKD1 530 aa4.52□□□□□ -1.69
C2CD3-214ENST00000540057 FBXO4Q9UKT5 387 aa4.52□□□□□ -1.69
C2CD3-214ENST00000540057 PPT2Q9UMR5 302 aa4.52□□□□□ -1.69
C2CD3-214ENST00000540057 PLA2G2DQ9UNK4 145 aa4.52□□□□□ -1.69
C2CD3-214ENST00000540057 FHOD1Q9Y613 1164 aa4.52□□□□□ -1.69
C2CD3-214ENST00000540057 COL4A3Q01955 1670 aa4.51□□□□□ -1.69
C2CD3-214ENST00000540057 SETXQ7Z333 2677 aaKnown RBP4.51□□□□□ -1.69
C2CD3-214ENST00000540057 CCDC171Q6TFL3 1326 aa4.51□□□□□ -1.69
C2CD3-214ENST00000540057 NRCAMQ92823 1304 aa4.51□□□□□ -1.69
C2CD3-214ENST00000540057 DOCK8Q8NF50 2099 aa4.51□□□□□ -1.69
C2CD3-214ENST00000540057 TSPY2A6NKD2 308 aa4.51□□□□□ -1.69
C2CD3-214ENST00000540057 SRRM3A6NNA2 597 aaPredicted RBP4.51□□□□□ -1.69
C2CD3-214ENST00000540057 TAF4O00268 1085 aa4.51□□□□□ -1.69
C2CD3-214ENST00000540057 MGEA5O60502 916 aa4.51□□□□□ -1.69
C2CD3-214ENST00000540057 N4BP1O75113 896 aaKnown RBP4.51□□□□□ -1.69
C2CD3-214ENST00000540057 GSTM1P09488 218 aa4.51□□□□□ -1.69
C2CD3-214ENST00000540057 CT47B1P0C2W7 299 aaPredicted RBP4.51□□□□□ -1.69
C2CD3-214ENST00000540057 PDHBP11177 359 aa4.51□□□□□ -1.69
C2CD3-214ENST00000540057 EPCAMP16422 314 aa4.51□□□□□ -1.69
C2CD3-214ENST00000540057 LAG3P18627 525 aa4.51□□□□□ -1.69
C2CD3-214ENST00000540057 ATP5JP18859 108 aa4.51□□□□□ -1.69
C2CD3-214ENST00000540057 IBSPP21815 317 aaPredicted RBP4.51□□□□□ -1.69
C2CD3-214ENST00000540057 PBX3P40426 434 aa4.51□□□□□ -1.69
C2CD3-214ENST00000540057 NCKAP1LP55160 1127 aa4.51□□□□□ -1.69
C2CD3-214ENST00000540057 STARD6P59095 220 aa4.51□□□□□ -1.69
C2CD3-214ENST00000540057 RACK1P63244 317 aaKnown RBP4.51□□□□□ -1.69
C2CD3-214ENST00000540057 SMC1AQ14683 1233 aaKnown RBP4.51□□□□□ -1.69
C2CD3-214ENST00000540057 VMACQ2NL98 169 aa4.51□□□□□ -1.69
C2CD3-214ENST00000540057 KCNV1Q6PIU1 500 aa4.51□□□□□ -1.69
C2CD3-214ENST00000540057 DCLRE1AQ6PJP8 1040 aa4.51□□□□□ -1.69
C2CD3-214ENST00000540057 LRRC55Q6ZSA7 311 aa4.51□□□□□ -1.69
C2CD3-214ENST00000540057 GPR149Q86SP6 731 aa4.51□□□□□ -1.69
C2CD3-214ENST00000540057 ERC1Q8IUD2 1116 aa4.51□□□□□ -1.69
C2CD3-214ENST00000540057 TRMT2AQ8IZ69 625 aaKnown RBP4.51□□□□□ -1.69
C2CD3-214ENST00000540057 IFNL3Q8IZI9 196 aa4.51□□□□□ -1.69
C2CD3-214ENST00000540057 FAM9BQ8IZU0 186 aa4.51□□□□□ -1.69
C2CD3-214ENST00000540057 CLASRPQ8N2M8 674 aaKnown RBP4.51□□□□□ -1.69
C2CD3-214ENST00000540057 TMEM57Q8N5G2 664 aa4.51□□□□□ -1.69
C2CD3-214ENST00000540057 TP53I13Q8NBR0 393 aaPredicted RBP4.51□□□□□ -1.69
C2CD3-214ENST00000540057 SLC22A17Q8WUG5 538 aa4.51□□□□□ -1.69
C2CD3-214ENST00000540057 DDX1Q92499 740 aaKnown RBP4.51□□□□□ -1.69
C2CD3-214ENST00000540057 BRF1Q92994 677 aa4.51□□□□□ -1.69
C2CD3-214ENST00000540057 OSBP2Q969R2 916 aa4.51□□□□□ -1.69
C2CD3-214ENST00000540057 RELTQ969Z4 430 aa4.51□□□□□ -1.69
C2CD3-214ENST00000540057 FERD3LQ96RJ6 166 aa4.51□□□□□ -1.69
C2CD3-214ENST00000540057 MAF1Q9H063 256 aa4.51□□□□□ -1.69
C2CD3-214ENST00000540057 ARHGEF3Q9NR81 526 aa4.51□□□□□ -1.69
C2CD3-214ENST00000540057 SEMA4GQ9NTN9 838 aa4.51□□□□□ -1.69
C2CD3-214ENST00000540057 SPATA6Q9NWH7 488 aaPredicted RBP4.51□□□□□ -1.69
C2CD3-214ENST00000540057 PADI3Q9ULW8 664 aa4.51□□□□□ -1.69
C2CD3-214ENST00000540057 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.51□□□□□ -1.69
C2CD3-214ENST00000540057 ZNF451Q9Y4E5 1061 aa4.51□□□□□ -1.69
C2CD3-214ENST00000540057 TELO2Q9Y4R8 837 aa4.51□□□□□ -1.69
C2CD3-214ENST00000540057 PCDHB7Q9Y5E2 793 aa4.51□□□□□ -1.69
C2CD3-214ENST00000540057 SQORQ9Y6N5 450 aa4.51□□□□□ -1.69
C2CD3-214ENST00000540057 ANKRD11Q6UB99 2663 aaPredicted RBP4.51□□□□□ -1.69
C2CD3-214ENST00000540057 ZFYVE26Q68DK2 2539 aa4.5□□□□□ -1.69
C2CD3-214ENST00000540057 MYH6P13533 1939 aa4.5□□□□□ -1.69
C2CD3-214ENST00000540057 ABCB11O95342 1321 aa4.5□□□□□ -1.69
C2CD3-214ENST00000540057 MBLAC1A4D2B0 266 aaPredicted RBP4.5□□□□□ -1.69
C2CD3-214ENST00000540057 OTOL1A6NHN0 477 aaPredicted RBP4.5□□□□□ -1.69
C2CD3-214ENST00000540057 NOP56O00567 594 aaKnown RBP4.5□□□□□ -1.69
C2CD3-214ENST00000540057 GPAA1O43292 621 aa4.5□□□□□ -1.69
C2CD3-214ENST00000540057 FOXD2O60548 495 aaPredicted RBP4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms