RNA–Protein interactions for RNA: ENST00000539847.1

CCDC60-204, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CCDC60, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-204ENST00000539847 SARNPP82979 210 aaKnown RBP8.14□□□□□ -1.11
CCDC60-204ENST00000539847 ATP11AP98196 1134 aa8.14□□□□□ -1.11
CCDC60-204ENST00000539847 CAV1Q03135 178 aa8.14□□□□□ -1.11
CCDC60-204ENST00000539847 MAPK7Q13164 816 aa8.14□□□□□ -1.11
CCDC60-204ENST00000539847 E2F5Q15329 346 aa8.14□□□□□ -1.11
CCDC60-204ENST00000539847 EPHA7Q15375 998 aa8.14□□□□□ -1.11
CCDC60-204ENST00000539847 SGSM1Q2NKQ1 1148 aa8.14□□□□□ -1.11
CCDC60-204ENST00000539847 COX20Q5RI15 118 aa8.14□□□□□ -1.11
CCDC60-204ENST00000539847 WASHC2DQ5SRD0 308 aa8.14□□□□□ -1.11
CCDC60-204ENST00000539847 C11orf63Q6NUN7 778 aa8.14□□□□□ -1.11
CCDC60-204ENST00000539847 MIS18BP1Q6P0N0 1132 aa8.14□□□□□ -1.11
CCDC60-204ENST00000539847 ZDHHC24Q6UX98 284 aa8.14□□□□□ -1.11
CCDC60-204ENST00000539847 CEP128Q6ZU80 1094 aa8.14□□□□□ -1.11
CCDC60-204ENST00000539847 DDX42Q86XP3 938 aaKnown RBP eCLIP8.14□□□□□ -1.11
CCDC60-204ENST00000539847 RHOT2Q8IXI1 618 aa8.14□□□□□ -1.11
CCDC60-204ENST00000539847 AGGF1Q8N302 714 aaeCLIP8.14□□□□□ -1.11
CCDC60-204ENST00000539847 FAM133AQ8N9E0 248 aa8.14□□□□□ -1.11
CCDC60-204ENST00000539847 AGAP11Q8TF27 550 aa8.14□□□□□ -1.11
CCDC60-204ENST00000539847 ZNF483Q8TF39 744 aaPredicted RBP8.14□□□□□ -1.11
CCDC60-204ENST00000539847 CKAP2Q8WWK9 683 aa8.14□□□□□ -1.11
CCDC60-204ENST00000539847 LENG1Q96BZ8 264 aaPredicted RBP8.14□□□□□ -1.11
CCDC60-204ENST00000539847 STAMBPL1Q96FJ0 436 aa8.14□□□□□ -1.11
CCDC60-204ENST00000539847 FGD4Q96M96 766 aa8.14□□□□□ -1.11
CCDC60-204ENST00000539847 TMEM47Q9BQJ4 181 aa8.14□□□□□ -1.11
CCDC60-204ENST00000539847 PACSIN1Q9BY11 444 aa8.14□□□□□ -1.11
CCDC60-204ENST00000539847 STK33Q9BYT3 514 aa8.14□□□□□ -1.11
CCDC60-204ENST00000539847 FOXP3Q9BZS1 431 aa8.14□□□□□ -1.11
CCDC60-204ENST00000539847 HIPK3Q9H422 1215 aa8.14□□□□□ -1.11
CCDC60-204ENST00000539847 PRDM12Q9H4Q4 367 aa8.14□□□□□ -1.11
CCDC60-204ENST00000539847 ACAD9Q9H845 621 aa8.14□□□□□ -1.11
CCDC60-204ENST00000539847 PNMA2Q9UL42 364 aa8.14□□□□□ -1.11
CCDC60-204ENST00000539847 RIPK3Q9Y572 518 aa8.14□□□□□ -1.11
CCDC60-204ENST00000539847 CTDP1Q9Y5B0 961 aaPredicted RBP8.14□□□□□ -1.11
CCDC60-204ENST00000539847 PCDHA11Q9Y5I1 949 aa8.14□□□□□ -1.11
CCDC60-204ENST00000539847 GREB1LQ9C091 1923 aaPredicted RBP8.13□□□□□ -1.11
CCDC60-204ENST00000539847 PLXNA1Q9UIW2 1896 aa8.13□□□□□ -1.11
CCDC60-204ENST00000539847 ZNF536O15090 1300 aa8.13□□□□□ -1.11
CCDC60-204ENST00000539847 CYP3A7-CYP3A51PA0A087WV96 503 aa8.13□□□□□ -1.11
CCDC60-204ENST00000539847 ANKRD62A6NC57 917 aa8.13□□□□□ -1.11
CCDC60-204ENST00000539847 DDX3XO00571 662 aaKnown RBP eCLIP8.13□□□□□ -1.11
CCDC60-204ENST00000539847 RASGRF2O14827 1237 aa8.13□□□□□ -1.11
CCDC60-204ENST00000539847 ADCY6O43306 1168 aa8.13□□□□□ -1.11
CCDC60-204ENST00000539847 MTA2O94776 668 aa8.13□□□□□ -1.11
CCDC60-204ENST00000539847 NPTXRO95502 500 aa8.13□□□□□ -1.11
CCDC60-204ENST00000539847 TTLL1O95922 423 aa8.13□□□□□ -1.11
CCDC60-204ENST00000539847 CLTAP09496 248 aa8.13□□□□□ -1.11
CCDC60-204ENST00000539847 SUPT20HL2P0C7V6 817 aa8.13□□□□□ -1.11
CCDC60-204ENST00000539847 TSPY3P0CV98 308 aa8.13□□□□□ -1.11
CCDC60-204ENST00000539847 TSPY8P0CW00 308 aa8.13□□□□□ -1.11
CCDC60-204ENST00000539847 ITGA4P13612 1032 aa8.13□□□□□ -1.11
CCDC60-204ENST00000539847 CYP3A7P24462 503 aa8.13□□□□□ -1.11
CCDC60-204ENST00000539847 MSH2P43246 934 aa8.13□□□□□ -1.11
CCDC60-204ENST00000539847 MRPS35P82673 323 aaKnown RBP8.13□□□□□ -1.11
CCDC60-204ENST00000539847 TNFAIP2Q03169 654 aa8.13□□□□□ -1.11
CCDC60-204ENST00000539847 MYO1EQ12965 1108 aa8.13□□□□□ -1.11
CCDC60-204ENST00000539847 CBLBQ13191 982 aa8.13□□□□□ -1.11
CCDC60-204ENST00000539847 AUHQ13825 339 aaKnown RBP8.13□□□□□ -1.11
CCDC60-204ENST00000539847 ADGRE1Q14246 886 aa8.13□□□□□ -1.11
CCDC60-204ENST00000539847 MYBPC2Q14324 1141 aa8.13□□□□□ -1.11
CCDC60-204ENST00000539847 PPP2R5AQ15172 486 aa8.13□□□□□ -1.11
CCDC60-204ENST00000539847 RBBP5Q15291 538 aaKnown RBP8.13□□□□□ -1.11
CCDC60-204ENST00000539847 ENOX2Q16206 610 aaKnown RBP8.13□□□□□ -1.11
CCDC60-204ENST00000539847 FSCN1Q16658 493 aaKnown RBP8.13□□□□□ -1.11
CCDC60-204ENST00000539847 KNOP1Q1ED39 458 aaKnown RBP8.13□□□□□ -1.11
CCDC60-204ENST00000539847 ACCSLQ4AC99 568 aa8.13□□□□□ -1.11
CCDC60-204ENST00000539847 IQSEC1Q6DN90 963 aa8.13□□□□□ -1.11
CCDC60-204ENST00000539847 RGS9BPQ6ZS82 235 aa8.13□□□□□ -1.11
CCDC60-204ENST00000539847 EPM2AIP1Q7L775 607 aaPredicted RBP8.13□□□□□ -1.11
CCDC60-204ENST00000539847 DAAM2Q86T65 1068 aa8.13□□□□□ -1.11
CCDC60-204ENST00000539847 TBC1D1Q86TI0 1168 aaPredicted RBP8.13□□□□□ -1.11
CCDC60-204ENST00000539847 FAM160B2Q86V87 743 aa8.13□□□□□ -1.11
CCDC60-204ENST00000539847 JAMLQ86YT9 394 aa8.13□□□□□ -1.11
CCDC60-204ENST00000539847 UBL4BQ8N7F7 174 aa8.13□□□□□ -1.11
CCDC60-204ENST00000539847 C12orf50Q8NA57 414 aaPredicted RBP8.13□□□□□ -1.11
CCDC60-204ENST00000539847 KDF1Q8NAX2 398 aaPredicted RBP8.13□□□□□ -1.11
CCDC60-204ENST00000539847 MDM1Q8TC05 714 aa8.13□□□□□ -1.11
CCDC60-204ENST00000539847 SNX29Q8TEQ0 813 aa8.13□□□□□ -1.11
CCDC60-204ENST00000539847 CHURC1Q8WUH1 139 aa8.13□□□□□ -1.11
CCDC60-204ENST00000539847 TMEM174Q8WUU8 243 aa8.13□□□□□ -1.11
CCDC60-204ENST00000539847 SCFD1Q8WVM8 642 aa8.13□□□□□ -1.11
CCDC60-204ENST00000539847 INPP5DQ92835 1189 aa8.13□□□□□ -1.11
CCDC60-204ENST00000539847 ART4Q93070 314 aa8.13□□□□□ -1.11
CCDC60-204ENST00000539847 KLHL29Q96CT2 875 aa8.13□□□□□ -1.11
CCDC60-204ENST00000539847 TBC1D31Q96DN5 1066 aa8.13□□□□□ -1.11
CCDC60-204ENST00000539847 GMCL1Q96IK5 515 aa8.13□□□□□ -1.11
CCDC60-204ENST00000539847 MBOAT7Q96N66 472 aa8.13□□□□□ -1.11
CCDC60-204ENST00000539847 ELAC2Q9BQ52 826 aaKnown RBP8.13□□□□□ -1.11
CCDC60-204ENST00000539847 SYT11Q9BT88 431 aa8.13□□□□□ -1.11
CCDC60-204ENST00000539847 TUBB6Q9BUF5 446 aa8.13□□□□□ -1.11
CCDC60-204ENST00000539847 C2orf49Q9BVC5 232 aaPredicted RBP8.13□□□□□ -1.11
CCDC60-204ENST00000539847 AP1M1Q9BXS5 423 aa8.13□□□□□ -1.11
CCDC60-204ENST00000539847 ECT2Q9H8V3 914 aa8.13□□□□□ -1.11
CCDC60-204ENST00000539847 CAPN10Q9HC96 672 aa8.13□□□□□ -1.11
CCDC60-204ENST00000539847 TXLNGQ9NUQ3 528 aa8.13□□□□□ -1.11
CCDC60-204ENST00000539847 CUEDC1Q9NWM3 386 aaPredicted RBP8.13□□□□□ -1.11
CCDC60-204ENST00000539847 PGPEP1Q9NXJ5 209 aa8.13□□□□□ -1.11
CCDC60-204ENST00000539847 MTMR4Q9NYA4 1195 aa8.13□□□□□ -1.11
CCDC60-204ENST00000539847 WHRNQ9P202 907 aa8.13□□□□□ -1.11
CCDC60-204ENST00000539847 ATP8A1Q9Y2Q0 1164 aa8.13□□□□□ -1.11
CCDC60-204ENST00000539847 PCDHA3Q9Y5H8 950 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms