RNA–Protein interactions for RNA: ENST00000539737.6

USB1-203, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-203ENST00000539737 LACTBL1A8MY62 500 aa16.18■□□□□ 0.18
USB1-203ENST00000539737 CHADO15335 359 aa16.18■□□□□ 0.18
USB1-203ENST00000539737 TBCAO75347 108 aaKnown RBP16.18■□□□□ 0.18
USB1-203ENST00000539737 PLS3P13797 630 aa16.18■□□□□ 0.18
USB1-203ENST00000539737 NMT1P30419 496 aaKnown RBP16.18■□□□□ 0.18
USB1-203ENST00000539737 MATR3P43243 847 aaKnown RBP eCLIP16.18■□□□□ 0.181e-12■■□□□ 13.8
USB1-203ENST00000539737 FCHO2Q0JRZ9 810 aa16.18■□□□□ 0.18
USB1-203ENST00000539737 PLD1Q13393 1074 aa16.18■□□□□ 0.18
USB1-203ENST00000539737 DHX8Q14562 1220 aaKnown RBP16.18■□□□□ 0.18
USB1-203ENST00000539737 NOLC1Q14978 699 aaKnown RBP eCLIP16.18■□□□□ 0.18
USB1-203ENST00000539737 AASDHQ4L235 1098 aaPredicted RBP16.18■□□□□ 0.18
USB1-203ENST00000539737 SHC4Q6S5L8 630 aa16.18■□□□□ 0.18
USB1-203ENST00000539737 DSTYKQ6XUX3 929 aa16.18■□□□□ 0.18
USB1-203ENST00000539737 DNAJB7Q7Z6W7 309 aaPredicted RBP16.18■□□□□ 0.18
USB1-203ENST00000539737 APPL2Q8NEU8 664 aa16.18■□□□□ 0.18
USB1-203ENST00000539737 GIPC2Q8TF65 315 aa16.18■□□□□ 0.18
USB1-203ENST00000539737 REEP2Q9BRK0 252 aa16.18■□□□□ 0.18
USB1-203ENST00000539737 PYM1Q9BRP8 204 aaKnown RBP16.18■□□□□ 0.18
USB1-203ENST00000539737 CUEDC2Q9H467 287 aa16.18■□□□□ 0.18
USB1-203ENST00000539737 LARSQ9P2J5 1176 aaKnown RBP16.18■□□□□ 0.18
USB1-203ENST00000539737 M0QZQ0 153 aa16.17■□□□□ 0.18
USB1-203ENST00000539737 FAM13AO94988 1023 aa16.17■□□□□ 0.18
USB1-203ENST00000539737 ATF6P18850 670 aa16.17■□□□□ 0.18
USB1-203ENST00000539737 SCP2P22307 547 aa16.17■□□□□ 0.18
USB1-203ENST00000539737 CCINQ13939 588 aa16.17■□□□□ 0.18
USB1-203ENST00000539737 LRRC32Q14392 662 aa16.17■□□□□ 0.18
USB1-203ENST00000539737 PPP2R5DQ14738 602 aa16.17■□□□□ 0.18
USB1-203ENST00000539737 ARSHQ5FYA8 562 aa16.17■□□□□ 0.18
USB1-203ENST00000539737 RESP18Q5W5W9 173 aa16.17■□□□□ 0.18
USB1-203ENST00000539737 CENPPQ6IPU0 288 aa16.17■□□□□ 0.18
USB1-203ENST00000539737 MAMSTRQ6ZN01 415 aa16.17■□□□□ 0.18
USB1-203ENST00000539737 SV2BQ7L1I2 683 aa16.17■□□□□ 0.18
USB1-203ENST00000539737 PDILTQ8N807 584 aa16.17■□□□□ 0.18
USB1-203ENST00000539737 TMEM161BQ8NDZ6 487 aa16.17■□□□□ 0.18
USB1-203ENST00000539737 SPIRE2Q8WWL2 714 aa16.17■□□□□ 0.18
USB1-203ENST00000539737 FAM212AQ96EL1 285 aa16.17■□□□□ 0.18
USB1-203ENST00000539737 FAM84AQ96KN4 292 aa16.17■□□□□ 0.18
USB1-203ENST00000539737 SEPT5Q99719 369 aaPredicted RBP16.17■□□□□ 0.18
USB1-203ENST00000539737 IKZF4Q9H2S9 585 aa16.17■□□□□ 0.18
USB1-203ENST00000539737 MAGEF1Q9HAY2 307 aa16.17■□□□□ 0.18
USB1-203ENST00000539737 FBRSL1Q9HCM7 1045 aaKnown RBP16.17■□□□□ 0.18
USB1-203ENST00000539737 CCL26Q9Y258 94 aa16.17■□□□□ 0.18
USB1-203ENST00000539737 SCN1AP35498 2009 aa16.16■□□□□ 0.18
USB1-203ENST00000539737 A0A087X0B3 334 aa16.16■□□□□ 0.18
USB1-203ENST00000539737 TISP43B9A030 160 aa16.16■□□□□ 0.18
USB1-203ENST00000539737 DCLK1O15075 740 aa16.16■□□□□ 0.18
USB1-203ENST00000539737 OAZ2O95190 189 aa16.16■□□□□ 0.18
USB1-203ENST00000539737 MAPTP10636 758 aaKnown RBP16.16■□□□□ 0.18
USB1-203ENST00000539737 GPR15P49685 360 aa16.16■□□□□ 0.18
USB1-203ENST00000539737 EPHB3P54753 998 aa16.16■□□□□ 0.18
USB1-203ENST00000539737 OVOS1Q6IE37 1185 aa16.16■□□□□ 0.18
USB1-203ENST00000539737 FSTL4Q6MZW2 842 aa16.16■□□□□ 0.18
USB1-203ENST00000539737 IQUBQ8NA54 791 aa16.16■□□□□ 0.18
USB1-203ENST00000539737 FAM200AQ8TCP9 573 aa16.16■□□□□ 0.18
USB1-203ENST00000539737 BICD1Q96G01 975 aa16.16■□□□□ 0.18
USB1-203ENST00000539737 BORCS6Q96GS4 357 aa16.16■□□□□ 0.18
USB1-203ENST00000539737 HHIPQ96QV1 700 aa16.16■□□□□ 0.18
USB1-203ENST00000539737 LRRC27Q9C0I9 530 aa16.16■□□□□ 0.18
USB1-203ENST00000539737 TNMDQ9H2S6 317 aa16.16■□□□□ 0.18
USB1-203ENST00000539737 IL21Q9HBE4 155 aa16.16■□□□□ 0.18
USB1-203ENST00000539737 PARVGQ9HBI0 331 aa16.16■□□□□ 0.18
USB1-203ENST00000539737 TTC26A0AVF1 554 aa16.15■□□□□ 0.18
USB1-203ENST00000539737 DPYSL4O14531 572 aa16.15■□□□□ 0.18
USB1-203ENST00000539737 TOM1L1O75674 476 aa16.15■□□□□ 0.18
USB1-203ENST00000539737 EGFP01133 1207 aa16.15■□□□□ 0.18
USB1-203ENST00000539737 NFICP08651 508 aa16.15■□□□□ 0.18
USB1-203ENST00000539737 ARSAP15289 507 aa16.15■□□□□ 0.18
USB1-203ENST00000539737 SPINK2P20155 84 aa16.15■□□□□ 0.18
USB1-203ENST00000539737 ABCD1P33897 745 aa16.15■□□□□ 0.18
USB1-203ENST00000539737 AARSP49588 968 aaKnown RBP eCLIP16.15■□□□□ 0.18
USB1-203ENST00000539737 ZNF131P52739 623 aa16.15■□□□□ 0.18
USB1-203ENST00000539737 ZBTB6Q15916 424 aa16.15■□□□□ 0.18
USB1-203ENST00000539737 ENOX2Q16206 610 aaKnown RBP16.15■□□□□ 0.18
USB1-203ENST00000539737 SLC39A12Q504Y0 691 aa16.15■□□□□ 0.18
USB1-203ENST00000539737 SDHAF4Q5VUM1 108 aa16.15■□□□□ 0.18
USB1-203ENST00000539737 SCARA3Q6AZY7 606 aa16.15■□□□□ 0.18
USB1-203ENST00000539737 ADALQ6DHV7 355 aa16.15■□□□□ 0.18
USB1-203ENST00000539737 IL31Q6EBC2 164 aa16.15■□□□□ 0.18
USB1-203ENST00000539737 USP37Q86T82 979 aa16.15■□□□□ 0.18
USB1-203ENST00000539737 WDR5BQ86VZ2 330 aa16.15■□□□□ 0.18
USB1-203ENST00000539737 TTC16Q8NEE8 873 aa16.15■□□□□ 0.18
USB1-203ENST00000539737 NTPCRQ9BSD7 190 aaKnown RBP16.15■□□□□ 0.18
USB1-203ENST00000539737 SLC46A2Q9BY10 475 aa16.15■□□□□ 0.18
USB1-203ENST00000539737 C8orf33Q9H7E9 229 aaPredicted RBP16.15■□□□□ 0.18
USB1-203ENST00000539737 HPS4Q9NQG7 708 aa16.15■□□□□ 0.18
USB1-203ENST00000539737 INVSQ9Y283 1065 aa16.15■□□□□ 0.18
USB1-203ENST00000539737 ZZEF1O43149 2961 aa16.15■□□□□ 0.18
USB1-203ENST00000539737 SPEGQ15772 3267 aa16.14■□□□□ 0.18
USB1-203ENST00000539737 WDFY3Q8IZQ1 3526 aa16.14■□□□□ 0.17
USB1-203ENST00000539737 GIPC1O14908 333 aa16.14■□□□□ 0.17
USB1-203ENST00000539737 TOP3BO95985 862 aaKnown RBP16.14■□□□□ 0.17
USB1-203ENST00000539737 PMLP29590 882 aa16.14■□□□□ 0.17
USB1-203ENST00000539737 LRPAP1P30533 357 aa16.14■□□□□ 0.17
USB1-203ENST00000539737 ALDH1A3P47895 512 aa16.14■□□□□ 0.17
USB1-203ENST00000539737 MCL1Q07820 350 aa16.14■□□□□ 0.17
USB1-203ENST00000539737 GPR17Q13304 367 aa16.14■□□□□ 0.17
USB1-203ENST00000539737 E2F4Q16254 413 aa16.14■□□□□ 0.17
USB1-203ENST00000539737 CCDC142Q17RM4 750 aa16.14■□□□□ 0.17
USB1-203ENST00000539737 JADE1Q6IE81 842 aa16.14■□□□□ 0.17
USB1-203ENST00000539737 MYCT1Q8N699 235 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms