RNA–Protein interactions for RNA: ENST00000539687.5

SPARC-209, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 511 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-209ENST00000539687 ECEL1O95672 775 aa10.77□□□□□ -0.69
SPARC-209ENST00000539687 PYGMP11217 842 aa10.77□□□□□ -0.69
SPARC-209ENST00000539687 CYP3A5P20815 502 aa10.77□□□□□ -0.69
SPARC-209ENST00000539687 BRD2P25440 801 aaKnown RBP10.77□□□□□ -0.69
SPARC-209ENST00000539687 HOXC8P31273 242 aa10.77□□□□□ -0.69
SPARC-209ENST00000539687 PTPN7P35236 360 aa10.77□□□□□ -0.69
SPARC-209ENST00000539687 CARSP49589 748 aaKnown RBP10.77□□□□□ -0.69
SPARC-209ENST00000539687 CAV1Q03135 178 aa10.77□□□□□ -0.69
SPARC-209ENST00000539687 ZNF211Q13398 564 aaPredicted RBP10.77□□□□□ -0.69
SPARC-209ENST00000539687 ZNF268Q14587 947 aaPredicted RBP10.77□□□□□ -0.69
SPARC-209ENST00000539687 TERF2Q15554 542 aa10.77□□□□□ -0.69
SPARC-209ENST00000539687 CNGA2Q16280 664 aa10.77□□□□□ -0.69
SPARC-209ENST00000539687 PTPROQ16827 1216 aa10.77□□□□□ -0.69
SPARC-209ENST00000539687 HADHQ16836 314 aaKnown RBP10.77□□□□□ -0.69
SPARC-209ENST00000539687 KIZQ2M2Z5 673 aa10.77□□□□□ -0.69
SPARC-209ENST00000539687 CCDC137Q6PK04 289 aaKnown RBP10.77□□□□□ -0.69
SPARC-209ENST00000539687 SCARA5Q6ZMJ2 495 aa10.77□□□□□ -0.69
SPARC-209ENST00000539687 POLNQ7Z5Q5 900 aa10.77□□□□□ -0.69
SPARC-209ENST00000539687 C18orf8Q96DM3 657 aa10.77□□□□□ -0.69
SPARC-209ENST00000539687 ZNF668Q96K58 619 aaPredicted RBP10.77□□□□□ -0.69
SPARC-209ENST00000539687 NT5C1AQ9BXI3 368 aa10.77□□□□□ -0.69
SPARC-209ENST00000539687 FAM49AQ9H0Q0 323 aaPredicted RBP10.77□□□□□ -0.69
SPARC-209ENST00000539687 CNTN3Q9P232 1028 aa10.77□□□□□ -0.69
SPARC-209ENST00000539687 GJD2Q9UKL4 321 aa10.77□□□□□ -0.69
SPARC-209ENST00000539687 SIGLEC16A6NMB1 481 aa10.76□□□□□ -0.69
SPARC-209ENST00000539687 TTI1O43156 1089 aa10.76□□□□□ -0.69
SPARC-209ENST00000539687 TJP3O95049 919 aa10.76□□□□□ -0.69
SPARC-209ENST00000539687 KRT7P08729 469 aa10.76□□□□□ -0.69
SPARC-209ENST00000539687 MYBL2P10244 700 aa10.76□□□□□ -0.69
SPARC-209ENST00000539687 ITGA4P13612 1032 aa10.76□□□□□ -0.69
SPARC-209ENST00000539687 KCNE1P15382 129 aa10.76□□□□□ -0.69
SPARC-209ENST00000539687 PAX3P23760 479 aa10.76□□□□□ -0.69
SPARC-209ENST00000539687 CYP2C19P33261 490 aa10.76□□□□□ -0.69
SPARC-209ENST00000539687 RDXP35241 583 aaKnown RBP10.76□□□□□ -0.69
SPARC-209ENST00000539687 COILP38432 576 aaPredicted RBP10.76□□□□□ -0.69
SPARC-209ENST00000539687 RAD23BP54727 409 aa10.76□□□□□ -0.69
SPARC-209ENST00000539687 EIF3BP55884 814 aaKnown RBP10.76□□□□□ -0.69
SPARC-209ENST00000539687 GJA9P57773 515 aa10.76□□□□□ -0.69
SPARC-209ENST00000539687 PURAQ00577 322 aaKnown RBP10.76□□□□□ -0.69
SPARC-209ENST00000539687 SNX17Q15036 470 aa10.76□□□□□ -0.69
SPARC-209ENST00000539687 RUFY4Q6ZNE9 571 aa10.76□□□□□ -0.69
SPARC-209ENST00000539687 CDR2LQ86X02 465 aaPredicted RBP10.76□□□□□ -0.69
SPARC-209ENST00000539687 JAMLQ86YT9 394 aa10.76□□□□□ -0.69
SPARC-209ENST00000539687 ZDHHC17Q8IUH5 632 aa10.76□□□□□ -0.69
SPARC-209ENST00000539687 GSPT2Q8IYD1 628 aaKnown RBP10.76□□□□□ -0.69
SPARC-209ENST00000539687 CCDC105Q8IYK2 499 aa10.76□□□□□ -0.69
SPARC-209ENST00000539687 PRELID2Q8N945 189 aa10.76□□□□□ -0.69
SPARC-209ENST00000539687 CXorf38Q8TB03 319 aa10.76□□□□□ -0.69
SPARC-209ENST00000539687 ZBTB10Q96DT7 871 aa10.76□□□□□ -0.69
SPARC-209ENST00000539687 MS4A3Q96HJ5 214 aa10.76□□□□□ -0.69
SPARC-209ENST00000539687 FMO2Q99518 471 aa10.76□□□□□ -0.69
SPARC-209ENST00000539687 OSMRQ99650 979 aa10.76□□□□□ -0.69
SPARC-209ENST00000539687 SH3GL2Q99962 352 aa10.76□□□□□ -0.69
SPARC-209ENST00000539687 UPF3AQ9H1J1 476 aaKnown RBP10.76□□□□□ -0.69
SPARC-209ENST00000539687 CHST12Q9NRB3 414 aa10.76□□□□□ -0.69
SPARC-209ENST00000539687 FLRT1Q9NZU1 646 aa10.76□□□□□ -0.69
SPARC-209ENST00000539687 POLIQ9UNA4 740 aa10.76□□□□□ -0.69
SPARC-209ENST00000539687 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.76□□□□□ -0.69
SPARC-209ENST00000539687 EFR3BQ9Y2G0 817 aa10.76□□□□□ -0.69
SPARC-209ENST00000539687 ANK1P16157 1881 aa10.75□□□□□ -0.69
SPARC-209ENST00000539687 TCRBV5S1A1TA0A578 114 aa10.75□□□□□ -0.69
SPARC-209ENST00000539687 POLR3GO15318 223 aaPredicted RBP10.75□□□□□ -0.69
SPARC-209ENST00000539687 ADCY6O43306 1168 aa10.75□□□□□ -0.69
SPARC-209ENST00000539687 ECM2O94769 699 aaPredicted RBP10.75□□□□□ -0.69
SPARC-209ENST00000539687 RARBP10826 455 aa10.75□□□□□ -0.69
SPARC-209ENST00000539687 KRT3P12035 628 aa10.75□□□□□ -0.69
SPARC-209ENST00000539687 HOXA11P31270 313 aaPredicted RBP10.75□□□□□ -0.69
SPARC-209ENST00000539687 GABRB2P47870 512 aa10.75□□□□□ -0.69
SPARC-209ENST00000539687 RGS19P49795 217 aa10.75□□□□□ -0.69
SPARC-209ENST00000539687 CALCOCO2Q13137 446 aa10.75□□□□□ -0.69
SPARC-209ENST00000539687 CRHR2Q13324 411 aa10.75□□□□□ -0.69
SPARC-209ENST00000539687 SLMAPQ14BN4 828 aa10.75□□□□□ -0.69
SPARC-209ENST00000539687 PPP1R7Q15435 360 aa10.75□□□□□ -0.69
SPARC-209ENST00000539687 ZBTB6Q15916 424 aa10.75□□□□□ -0.69
SPARC-209ENST00000539687 CCNG2Q16589 344 aa10.75□□□□□ -0.69
SPARC-209ENST00000539687 SV2CQ496J9 727 aa10.75□□□□□ -0.69
SPARC-209ENST00000539687 ZNF394Q53GI3 561 aa10.75□□□□□ -0.69
SPARC-209ENST00000539687 XKR4Q5GH76 650 aa10.75□□□□□ -0.69
SPARC-209ENST00000539687 PPP1R15BQ5SWA1 713 aa10.75□□□□□ -0.69
SPARC-209ENST00000539687 PRAMEF19Q5SWL8 479 aa10.75□□□□□ -0.69
SPARC-209ENST00000539687 DUPD1Q68J44 220 aa10.75□□□□□ -0.69
SPARC-209ENST00000539687 LCLAT1Q6UWP7 414 aa10.75□□□□□ -0.69
SPARC-209ENST00000539687 RPAINQ86UA6 219 aa10.75□□□□□ -0.69
SPARC-209ENST00000539687 SESTD1Q86VW0 696 aa10.75□□□□□ -0.69
SPARC-209ENST00000539687 CCDC50Q8IVM0 306 aa10.75□□□□□ -0.69
SPARC-209ENST00000539687 TMEM192Q8IY95 271 aa10.75□□□□□ -0.69
SPARC-209ENST00000539687 SLC4A11Q8NBS3 891 aa10.75□□□□□ -0.69
SPARC-209ENST00000539687 STK32AQ8WU08 396 aa10.75□□□□□ -0.69
SPARC-209ENST00000539687 DNAJB3Q8WWF6 145 aa10.75□□□□□ -0.69
SPARC-209ENST00000539687 DDX27Q96GQ7 796 aaKnown RBP10.75□□□□□ -0.69
SPARC-209ENST00000539687 BTBD6Q96KE9 485 aa10.75□□□□□ -0.69
SPARC-209ENST00000539687 FAM84AQ96KN4 292 aa10.75□□□□□ -0.69
SPARC-209ENST00000539687 PPP1R16BQ96T49 567 aa10.75□□□□□ -0.69
SPARC-209ENST00000539687 CYLDQ9NQC7 956 aa10.75□□□□□ -0.69
SPARC-209ENST00000539687 SLC38A7Q9NVC3 462 aa10.75□□□□□ -0.69
SPARC-209ENST00000539687 SNTG2Q9NY99 539 aa10.75□□□□□ -0.69
SPARC-209ENST00000539687 VPS18Q9P253 973 aa10.75□□□□□ -0.69
SPARC-209ENST00000539687 HESX1Q9UBX0 185 aa10.75□□□□□ -0.69
SPARC-209ENST00000539687 PIN4Q9Y237 131 aaKnown RBP10.75□□□□□ -0.69
SPARC-209ENST00000539687 TRPV2Q9Y5S1 764 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms