RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 KPNA6O60684 536 aa6.76□□□□□ -1.33
LSAMP-207ENST00000539563 STK4Q13043 487 aa6.76□□□□□ -1.33
LSAMP-207ENST00000539563 TTLL9Q3SXZ7 439 aa6.76□□□□□ -1.33
LSAMP-207ENST00000539563 ZC2HC1CQ53FD0 456 aaPredicted RBP6.76□□□□□ -1.33
LSAMP-207ENST00000539563 TPCN2Q8NHX9 752 aa6.76□□□□□ -1.33
LSAMP-207ENST00000539563 NDEL1Q9GZM8 345 aa6.76□□□□□ -1.33
LSAMP-207ENST00000539563 RIC8BQ9NVN3 520 aa6.76□□□□□ -1.33
LSAMP-207ENST00000539563 DBR1Q9UK59 544 aaKnown RBP6.76□□□□□ -1.33
LSAMP-207ENST00000539563 SUPT3HB4E1H0 165 aa6.76□□□□□ -1.33
LSAMP-207ENST00000539563 EIF3HO15372 352 aaKnown RBP eCLIP6.76□□□□□ -1.33
LSAMP-207ENST00000539563 WEE2P0C1S8 567 aa6.76□□□□□ -1.33
LSAMP-207ENST00000539563 CYP2C9P11712 490 aa6.76□□□□□ -1.33
LSAMP-207ENST00000539563 GARTP22102 1010 aa6.76□□□□□ -1.33
LSAMP-207ENST00000539563 STIP1P31948 543 aaKnown RBP6.76□□□□□ -1.33
LSAMP-207ENST00000539563 AARS2Q5JTZ9 985 aaKnown RBP6.76□□□□□ -1.33
LSAMP-207ENST00000539563 E4F1Q66K89 784 aaPredicted RBP6.76□□□□□ -1.33
LSAMP-207ENST00000539563 AGPAT3Q9NRZ7 376 aa6.76□□□□□ -1.33
LSAMP-207ENST00000539563 KCNH7Q9NS40 1196 aa6.76□□□□□ -1.33
LSAMP-207ENST00000539563 NMRK1Q9NWW6 199 aa6.76□□□□□ -1.33
LSAMP-207ENST00000539563 BLOC1S6Q9UL45 172 aa6.76□□□□□ -1.33
LSAMP-207ENST00000539563 AAR2Q9Y312 384 aaKnown RBP6.76□□□□□ -1.33
LSAMP-207ENST00000539563 CCL15-CCL14A0A0B4J2E2 113 aa6.76□□□□□ -1.33
LSAMP-207ENST00000539563 STAG3L1P0CL83 205 aa6.76□□□□□ -1.33
LSAMP-207ENST00000539563 NCAM1P13591 858 aa6.76□□□□□ -1.33
LSAMP-207ENST00000539563 FCGRTP55899 365 aa6.76□□□□□ -1.33
LSAMP-207ENST00000539563 CUL2Q13617 745 aa6.76□□□□□ -1.33
LSAMP-207ENST00000539563 CCL15Q16663 113 aa6.76□□□□□ -1.33
LSAMP-207ENST00000539563 ABHD8Q96I13 439 aa6.76□□□□□ -1.33
LSAMP-207ENST00000539563 PAWRQ96IZ0 340 aaKnown RBP6.76□□□□□ -1.33
LSAMP-207ENST00000539563 SEPT5Q99719 369 aaPredicted RBP6.76□□□□□ -1.33
LSAMP-207ENST00000539563 DOLKQ9UPQ8 538 aa6.76□□□□□ -1.33
LSAMP-207ENST00000539563 ALG6Q9Y672 507 aa6.76□□□□□ -1.33
LSAMP-207ENST00000539563 IQSEC2Q5JU85 1478 aa6.76□□□□□ -1.33
LSAMP-207ENST00000539563 NWD1Q149M9 1564 aa6.76□□□□□ -1.33
LSAMP-207ENST00000539563 CLASP2O75122 1294 aaKnown RBP6.76□□□□□ -1.33
LSAMP-207ENST00000539563 NPTXRO95502 500 aa6.76□□□□□ -1.33
LSAMP-207ENST00000539563 GYPCP04921 128 aa6.76□□□□□ -1.33
LSAMP-207ENST00000539563 SLC9A1P19634 815 aa6.76□□□□□ -1.33
LSAMP-207ENST00000539563 COILP38432 576 aaPredicted RBP6.76□□□□□ -1.33
LSAMP-207ENST00000539563 PCSK7Q16549 785 aa6.76□□□□□ -1.33
LSAMP-207ENST00000539563 FAM83EQ2M2I3 478 aa6.76□□□□□ -1.33
LSAMP-207ENST00000539563 ZNF467Q7Z7K2 595 aaPredicted RBP6.76□□□□□ -1.33
LSAMP-207ENST00000539563 SLC16A10Q8TF71 515 aa6.76□□□□□ -1.33
LSAMP-207ENST00000539563 DEFB129Q9H1M3 183 aa6.76□□□□□ -1.33
LSAMP-207ENST00000539563 EPB41L4AQ9HCS5 686 aaPredicted RBP6.76□□□□□ -1.33
LSAMP-207ENST00000539563 DSEQ9UL01 958 aa6.76□□□□□ -1.33
LSAMP-207ENST00000539563 NRXN1Q9ULB1 1477 aa6.76□□□□□ -1.33
LSAMP-207ENST00000539563 KRT87PA6NCN2 255 aa6.76□□□□□ -1.33
LSAMP-207ENST00000539563 ZNF263O14978 683 aa6.76□□□□□ -1.33
LSAMP-207ENST00000539563 ITGB3P05106 788 aa6.76□□□□□ -1.33
LSAMP-207ENST00000539563 SLC11A2P49281 568 aa6.76□□□□□ -1.33
LSAMP-207ENST00000539563 FNTAP49354 379 aa6.76□□□□□ -1.33
LSAMP-207ENST00000539563 SLC26A2P50443 739 aa6.76□□□□□ -1.33
LSAMP-207ENST00000539563 LONRF1Q17RB8 773 aa6.76□□□□□ -1.33
LSAMP-207ENST00000539563 TFDP3Q5H9I0 405 aa6.76□□□□□ -1.33
LSAMP-207ENST00000539563 AGAP9Q5VTM2 703 aa6.76□□□□□ -1.33
LSAMP-207ENST00000539563 COL23A1Q86Y22 540 aaPredicted RBP6.76□□□□□ -1.33
LSAMP-207ENST00000539563 SNX31Q8N9S9 440 aa6.76□□□□□ -1.33
LSAMP-207ENST00000539563 TC2NQ8N9U0 490 aa6.76□□□□□ -1.33
LSAMP-207ENST00000539563 AGR3Q8TD06 166 aa6.76□□□□□ -1.33
LSAMP-207ENST00000539563 PABPC5Q96DU9 382 aaKnown RBP6.76□□□□□ -1.33
LSAMP-207ENST00000539563 GGA3Q9NZ52 723 aa6.76□□□□□ -1.33
LSAMP-207ENST00000539563 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.76□□□□□ -1.33
LSAMP-207ENST00000539563 ENO3P13929 434 aaPredicted RBP6.76□□□□□ -1.33
LSAMP-207ENST00000539563 CYP11B2P19099 503 aa6.76□□□□□ -1.33
LSAMP-207ENST00000539563 GTF2A2P52657 109 aa6.76□□□□□ -1.33
LSAMP-207ENST00000539563 EIF2B5Q13144 721 aaKnown RBP6.76□□□□□ -1.33
LSAMP-207ENST00000539563 BOLA3Q53S33 107 aa6.76□□□□□ -1.33
LSAMP-207ENST00000539563 CCNJLQ8IV13 435 aa6.76□□□□□ -1.33
LSAMP-207ENST00000539563 CLEC4FQ8N1N0 589 aa6.76□□□□□ -1.33
LSAMP-207ENST00000539563 UBA3Q8TBC4 463 aa6.76□□□□□ -1.33
LSAMP-207ENST00000539563 KCNV2Q8TDN2 545 aa6.76□□□□□ -1.33
LSAMP-207ENST00000539563 TMA16Q96EY4 203 aaKnown RBP6.76□□□□□ -1.33
LSAMP-207ENST00000539563 SEC16BQ96JE7 1060 aa6.76□□□□□ -1.33
LSAMP-207ENST00000539563 ZDHHC15Q96MV8 337 aa6.76□□□□□ -1.33
LSAMP-207ENST00000539563 MROH8Q9H579 483 aa6.76□□□□□ -1.33
LSAMP-207ENST00000539563 PPP1R3GB7ZBB8 358 aa6.76□□□□□ -1.33
LSAMP-207ENST00000539563 RAD51CO43502 376 aa6.76□□□□□ -1.33
LSAMP-207ENST00000539563 HMBSP08397 361 aa6.76□□□□□ -1.33
LSAMP-207ENST00000539563 GEMIN4P57678 1058 aaKnown RBP6.76□□□□□ -1.33
LSAMP-207ENST00000539563 TWF1Q12792 350 aa6.76□□□□□ -1.33
LSAMP-207ENST00000539563 MTA1Q13330 715 aa6.76□□□□□ -1.33
LSAMP-207ENST00000539563 KDELC2Q7Z4H8 507 aa6.76□□□□□ -1.33
LSAMP-207ENST00000539563 PPP1R36Q96LQ0 422 aa6.76□□□□□ -1.33
LSAMP-207ENST00000539563 CCT8L2Q96SF2 557 aa6.76□□□□□ -1.33
LSAMP-207ENST00000539563 TMEM161AQ9NX61 479 aa6.76□□□□□ -1.33
LSAMP-207ENST00000539563 DCDC2Q9UHG0 476 aa6.76□□□□□ -1.33
LSAMP-207ENST00000539563 SPATA31A5Q5VU36 1347 aa6.76□□□□□ -1.33
LSAMP-207ENST00000539563 SPATA31A7Q8IWB4 1347 aa6.76□□□□□ -1.33
LSAMP-207ENST00000539563 CPS1P31327 1500 aa6.75□□□□□ -1.33
LSAMP-207ENST00000539563 SYNDIG1LA6NDD5 238 aa6.75□□□□□ -1.33
LSAMP-207ENST00000539563 CST8O60676 142 aa6.75□□□□□ -1.33
LSAMP-207ENST00000539563 IRF1P10914 325 aa6.75□□□□□ -1.33
LSAMP-207ENST00000539563 HLA-DPA1P20036 260 aa6.75□□□□□ -1.33
LSAMP-207ENST00000539563 GUCY1A3Q02108 690 aa6.75□□□□□ -1.33
LSAMP-207ENST00000539563 PDK2Q15119 407 aa6.75□□□□□ -1.33
LSAMP-207ENST00000539563 CENPPQ6IPU0 288 aa6.75□□□□□ -1.33
LSAMP-207ENST00000539563 JAMLQ86YT9 394 aa6.75□□□□□ -1.33
LSAMP-207ENST00000539563 MMGT1Q8N4V1 131 aa6.75□□□□□ -1.33
LSAMP-207ENST00000539563 USP38Q8NB14 1042 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms