RNA–Protein interactions for RNA: ENST00000539413.1

CIT-210, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-210ENST00000539413 ATF6P18850 670 aa16.81■□□□□ 0.28
CIT-210ENST00000539413 TUFMP49411 452 aaKnown RBP16.81■□□□□ 0.28
CIT-210ENST00000539413 DLG4P78352 724 aa16.81■□□□□ 0.28
CIT-210ENST00000539413 MYL7Q01449 175 aa16.81■□□□□ 0.28
CIT-210ENST00000539413 TSPY1Q01534 308 aa16.81■□□□□ 0.28
CIT-210ENST00000539413 CCDC142Q17RM4 750 aa16.81■□□□□ 0.28
CIT-210ENST00000539413 INTS6LQ5JSJ4 861 aaKnown RBP16.81■□□□□ 0.28
CIT-210ENST00000539413 CEP135Q66GS9 1140 aa16.81■□□□□ 0.28
CIT-210ENST00000539413 MTSS1LQ765P7 747 aa16.81■□□□□ 0.28
CIT-210ENST00000539413 DPH6Q7L8W6 267 aa16.81■□□□□ 0.28
CIT-210ENST00000539413 LIMS2Q7Z4I7 341 aa16.81■□□□□ 0.28
CIT-210ENST00000539413 TMC8Q8IU68 726 aa16.81■□□□□ 0.28
CIT-210ENST00000539413 SUGP1Q8IWZ8 645 aaKnown RBP16.81■□□□□ 0.28
CIT-210ENST00000539413 LEMD2Q8NC56 503 aa16.81■□□□□ 0.28
CIT-210ENST00000539413 SPATA18Q8TC71 538 aa16.81■□□□□ 0.28
CIT-210ENST00000539413 SPPL2BQ8TCT7 592 aa16.81■□□□□ 0.28
CIT-210ENST00000539413 C2orf15Q8WU43 125 aaKnown RBP16.81■□□□□ 0.28
CIT-210ENST00000539413 KBTBD7Q8WVZ9 684 aa16.81■□□□□ 0.28
CIT-210ENST00000539413 ERCC4Q92889 916 aaPredicted RBP16.81■□□□□ 0.28
CIT-210ENST00000539413 KXD1Q9BQD3 176 aa16.81■□□□□ 0.28
CIT-210ENST00000539413 LPIN3Q9BQK8 851 aa16.81■□□□□ 0.28
CIT-210ENST00000539413 GDE1Q9NZC3 331 aa16.81■□□□□ 0.28
CIT-210ENST00000539413 GADD45BO75293 160 aaPredicted RBP16.8■□□□□ 0.28
CIT-210ENST00000539413 MICAL2O94851 1124 aa16.8■□□□□ 0.28
CIT-210ENST00000539413 HAPLN1P10915 354 aaPredicted RBP16.8■□□□□ 0.28
CIT-210ENST00000539413 NR2F2P24468 414 aa16.8■□□□□ 0.28
CIT-210ENST00000539413 LHX1P48742 406 aa16.8■□□□□ 0.28
CIT-210ENST00000539413 VCPP55072 806 aaKnown RBP16.8■□□□□ 0.28
CIT-210ENST00000539413 MYL6P60660 151 aa16.8■□□□□ 0.28
CIT-210ENST00000539413 CLDN10P78369 228 aa16.8■□□□□ 0.28
CIT-210ENST00000539413 SMARCB1Q12824 385 aa16.8■□□□□ 0.28
CIT-210ENST00000539413 TRPC3Q13507 836 aa16.8■□□□□ 0.28
CIT-210ENST00000539413 TDRD10Q5VZ19 366 aaKnown RBP16.8■□□□□ 0.28
CIT-210ENST00000539413 DNAJB7Q7Z6W7 309 aaPredicted RBP16.8■□□□□ 0.28
CIT-210ENST00000539413 SHKBP1Q8TBC3 707 aa16.8■□□□□ 0.28
CIT-210ENST00000539413 FAM200AQ8TCP9 573 aa16.8■□□□□ 0.28
CIT-210ENST00000539413 PSMG2Q969U7 264 aa16.8■□□□□ 0.28
CIT-210ENST00000539413 TIGD1Q96MW7 591 aa16.8■□□□□ 0.28
CIT-210ENST00000539413 MMS19Q96T76 1030 aa16.8■□□□□ 0.28
CIT-210ENST00000539413 PKMYT1Q99640 499 aa16.8■□□□□ 0.28
CIT-210ENST00000539413 PI4K2AQ9BTU6 479 aa16.8■□□□□ 0.28
CIT-210ENST00000539413 ZNF334Q9HCZ1 680 aaPredicted RBP16.8■□□□□ 0.28
CIT-210ENST00000539413 GTF3C4Q9UKN8 822 aa16.8■□□□□ 0.28
CIT-210ENST00000539413 FBXL21Q9UKT6 434 aa16.8■□□□□ 0.28
CIT-210ENST00000539413 ASB3Q9Y575 518 aa16.8■□□□□ 0.28
CIT-210ENST00000539413 PCDHB5Q9Y5E4 795 aa16.8■□□□□ 0.28
CIT-210ENST00000539413 A0A1W2PRU2 124 aa16.79■□□□□ 0.28
CIT-210ENST00000539413 PHACTR2O75167 634 aa16.79■□□□□ 0.28
CIT-210ENST00000539413 C4BPAP04003 597 aaKnown RBP16.79■□□□□ 0.28
CIT-210ENST00000539413 LMO2P25791 158 aa16.79■□□□□ 0.28
CIT-210ENST00000539413 AP3M2P53677 418 aa16.79■□□□□ 0.28
CIT-210ENST00000539413 BIRC3Q13489 604 aa16.79■□□□□ 0.28
CIT-210ENST00000539413 TEAD2Q15562 447 aa16.79■□□□□ 0.28
CIT-210ENST00000539413 NFE2Q16621 373 aaPredicted RBP16.79■□□□□ 0.28
CIT-210ENST00000539413 NFIL3Q16649 462 aa16.79■□□□□ 0.28
CIT-210ENST00000539413 WDR72Q3MJ13 1102 aa16.79■□□□□ 0.28
CIT-210ENST00000539413 ZCWPW2Q504Y3 356 aa16.79■□□□□ 0.28
CIT-210ENST00000539413 GPR152Q8TDT2 470 aa16.79■□□□□ 0.28
CIT-210ENST00000539413 GIPC2Q8TF65 315 aa16.79■□□□□ 0.28
CIT-210ENST00000539413 ZSWIM3Q96MP5 696 aa16.79■□□□□ 0.28
CIT-210ENST00000539413 MRPL45Q9BRJ2 306 aaKnown RBP16.79■□□□□ 0.28
CIT-210ENST00000539413 PLA2G2FQ9BZM2 168 aa16.79■□□□□ 0.28
CIT-210ENST00000539413 XYLT2Q9H1B5 865 aa16.79■□□□□ 0.28
CIT-210ENST00000539413 RMND1Q9NWS8 449 aa16.79■□□□□ 0.28
CIT-210ENST00000539413 FRMD4BQ9Y2L6 1034 aa16.79■□□□□ 0.28
CIT-210ENST00000539413 PCDHA5Q9Y5H7 936 aa16.79■□□□□ 0.28
CIT-210ENST00000539413 MYO10Q9HD67 2058 aa16.79■□□□□ 0.28
CIT-210ENST00000539413 MYBPHLA2RUH7 354 aa16.78■□□□□ 0.28
CIT-210ENST00000539413 ATP2C2O75185 946 aa16.78■□□□□ 0.28
CIT-210ENST00000539413 AKAP3O75969 853 aa16.78■□□□□ 0.28
CIT-210ENST00000539413 STAU1O95793 577 aaKnown RBP16.78■□□□□ 0.28
CIT-210ENST00000539413 WARSP23381 471 aaKnown RBP16.78■□□□□ 0.28
CIT-210ENST00000539413 FCARP24071 287 aa16.78■□□□□ 0.28
CIT-210ENST00000539413 PCSK1P29120 753 aa16.78■□□□□ 0.28
CIT-210ENST00000539413 GPR15P49685 360 aa16.78■□□□□ 0.28
CIT-210ENST00000539413 PSMC1P62191 440 aaKnown RBP16.78■□□□□ 0.28
CIT-210ENST00000539413 TNNC1P63316 161 aa16.78■□□□□ 0.28
CIT-210ENST00000539413 GPC5P78333 572 aa16.78■□□□□ 0.28
CIT-210ENST00000539413 VEPH1Q14D04 833 aa16.78■□□□□ 0.28
CIT-210ENST00000539413 FAM78AQ5JUQ0 283 aa16.78■□□□□ 0.28
CIT-210ENST00000539413 C1orf220Q5T0J3 134 aa16.78■□□□□ 0.28
CIT-210ENST00000539413 ZNF658Q5TYW1 1059 aaPredicted RBP16.78■□□□□ 0.28
CIT-210ENST00000539413 TANGO2Q6ICL3 276 aa16.78■□□□□ 0.28
CIT-210ENST00000539413 ITIH5Q86UX2 942 aa16.78■□□□□ 0.28
CIT-210ENST00000539413 SIX5Q8N196 739 aa16.78■□□□□ 0.28
CIT-210ENST00000539413 SPATA20Q8TB22 786 aa16.78■□□□□ 0.28
CIT-210ENST00000539413 TMC2Q8TDI7 906 aa16.78■□□□□ 0.28
CIT-210ENST00000539413 SMARCE1Q969G3 411 aa16.78■□□□□ 0.28
CIT-210ENST00000539413 ELMO3Q96BJ8 720 aa16.78■□□□□ 0.28
CIT-210ENST00000539413 GSDMAQ96QA5 445 aa16.78■□□□□ 0.28
CIT-210ENST00000539413 MFSD1Q9H3U5 465 aa16.78■□□□□ 0.28
CIT-210ENST00000539413 SLC2A4RGQ9NR83 387 aa16.78■□□□□ 0.28
CIT-210ENST00000539413 NXF1Q9UBU9 619 aaKnown RBP16.78■□□□□ 0.28
CIT-210ENST00000539413 WNT16Q9UBV4 365 aa16.78■□□□□ 0.28
CIT-210ENST00000539413 CA14Q9ULX7 337 aa16.78■□□□□ 0.28
CIT-210ENST00000539413 NME7Q9Y5B8 376 aa16.78■□□□□ 0.28
CIT-210ENST00000539413 KRBA1A5PL33 1030 aa16.77■□□□□ 0.28
CIT-210ENST00000539413 ECI2O75521 394 aa16.77■□□□□ 0.28
CIT-210ENST00000539413 SMC2O95347 1197 aa16.77■□□□□ 0.28
CIT-210ENST00000539413 VNN1O95497 513 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms