RNA–Protein interactions for RNA: ENST00000539320.2

SCARB1-206, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 720 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-206ENST00000539320 LRRTM3Q86VH5 581 aa23.9■■□□□ 1.42
SCARB1-206ENST00000539320 C1orf210Q8IVY1 113 aa23.9■■□□□ 1.42
SCARB1-206ENST00000539320 CSGALNACT2Q8N6G5 542 aa23.9■■□□□ 1.42
SCARB1-206ENST00000539320 CXorf38Q8TB03 319 aa23.9■■□□□ 1.42
SCARB1-206ENST00000539320 E2F7Q96AV8 911 aa23.9■■□□□ 1.42
SCARB1-206ENST00000539320 ANKRD36BP1Q96IX9 119 aa23.9■■□□□ 1.42
SCARB1-206ENST00000539320 HSPBP1Q9NZL4 362 aa23.9■■□□□ 1.42
SCARB1-206ENST00000539320 SIX4Q9UIU6 781 aa23.9■■□□□ 1.42
SCARB1-206ENST00000539320 PCDHA7Q9UN72 937 aa23.9■■□□□ 1.42
SCARB1-206ENST00000539320 MRPS17Q9Y2R5 130 aaKnown RBP23.9■■□□□ 1.42
SCARB1-206ENST00000539320 MTF2Q9Y483 593 aaPredicted RBP23.9■■□□□ 1.42
SCARB1-206ENST00000539320 COL4A2P08572 1712 aa23.9■■□□□ 1.42
SCARB1-206ENST00000539320 ZNF233A6NK53 670 aa23.89■■□□□ 1.41
SCARB1-206ENST00000539320 HEPACAM2A8MVW5 462 aa23.89■■□□□ 1.41
SCARB1-206ENST00000539320 HUS1O60921 280 aa23.89■■□□□ 1.41
SCARB1-206ENST00000539320 HAPLN1P10915 354 aaPredicted RBP23.89■■□□□ 1.41
SCARB1-206ENST00000539320 GABRR2P28476 465 aa23.89■■□□□ 1.41
SCARB1-206ENST00000539320 HOXD13P35453 343 aa23.89■■□□□ 1.41
SCARB1-206ENST00000539320 CDR1P51861 262 aa23.89■■□□□ 1.41
SCARB1-206ENST00000539320 RBP5P82980 135 aa23.89■■□□□ 1.41
SCARB1-206ENST00000539320 SURF1Q15526 300 aa23.89■■□□□ 1.41
SCARB1-206ENST00000539320 ARHGAP15Q53QZ3 475 aa23.89■■□□□ 1.41
SCARB1-206ENST00000539320 STXBP5Q5T5C0 1151 aa23.89■■□□□ 1.41
SCARB1-206ENST00000539320 RESP18Q5W5W9 173 aa23.89■■□□□ 1.41
SCARB1-206ENST00000539320 LMBRD2Q68DH5 695 aaPredicted RBP23.89■■□□□ 1.41
SCARB1-206ENST00000539320 ZNF852Q6ZMS4 543 aa23.89■■□□□ 1.41
SCARB1-206ENST00000539320 CBWD2Q8IUF1 395 aa23.89■■□□□ 1.41
SCARB1-206ENST00000539320 TMEM86AQ8N2M4 240 aa23.89■■□□□ 1.41
SCARB1-206ENST00000539320 SPRYD3Q8NCJ5 442 aa23.89■■□□□ 1.41
SCARB1-206ENST00000539320 GCNAQ96QF7 691 aa23.89■■□□□ 1.41
SCARB1-206ENST00000539320 ATXN3LQ9H3M9 355 aa23.89■■□□□ 1.41
SCARB1-206ENST00000539320 INTS13Q9NVM9 706 aa23.89■■□□□ 1.41
SCARB1-206ENST00000539320 PCDHB5Q9Y5E4 795 aa23.89■■□□□ 1.41
SCARB1-206ENST00000539320 MFSD6LQ8IWD5 586 aa23.88■■□□□ 1.41
SCARB1-206ENST00000539320 SPATA18Q8TC71 538 aa23.88■■□□□ 1.41
SCARB1-206ENST00000539320 ZNF507Q8TCN5 953 aa23.88■■□□□ 1.41
SCARB1-206ENST00000539320 RSPRY1Q96DX4 576 aa23.88■■□□□ 1.41
SCARB1-206ENST00000539320 NELL2Q99435 816 aa23.88■■□□□ 1.41
SCARB1-206ENST00000539320 MKNK1Q9BUB5 465 aa23.88■■□□□ 1.41
SCARB1-206ENST00000539320 KIAA1586Q9HCI6 787 aa23.88■■□□□ 1.41
SCARB1-206ENST00000539320 TRPV5Q9NQA5 729 aa23.88■■□□□ 1.41
SCARB1-206ENST00000539320 GDAP2Q9NXN4 497 aa23.88■■□□□ 1.41
SCARB1-206ENST00000539320 CFAP45Q9UL16 551 aa23.88■■□□□ 1.41
SCARB1-206ENST00000539320 NUP210Q8TEM1 1887 aaPredicted RBP23.87■■□□□ 1.41
SCARB1-206ENST00000539320 PTPRJQ12913 1337 aa23.87■■□□□ 1.41
SCARB1-206ENST00000539320 TICRRQ7Z2Z1 1910 aa23.87■■□□□ 1.41
SCARB1-206ENST00000539320 ZNF263O14978 683 aa23.87■■□□□ 1.41
SCARB1-206ENST00000539320 TNNC2P02585 160 aa23.87■■□□□ 1.41
SCARB1-206ENST00000539320 CDC25CP30307 473 aa23.87■■□□□ 1.41
SCARB1-206ENST00000539320 MYL7Q01449 175 aa23.87■■□□□ 1.41
SCARB1-206ENST00000539320 DNM1Q05193 864 aaKnown RBP23.87■■□□□ 1.41
SCARB1-206ENST00000539320 EHHADHQ08426 723 aa23.87■■□□□ 1.41
SCARB1-206ENST00000539320 TAF12Q16514 161 aa23.87■■□□□ 1.41
SCARB1-206ENST00000539320 NFE2Q16621 373 aaPredicted RBP23.87■■□□□ 1.41
SCARB1-206ENST00000539320 GPR158Q5T848 1215 aa23.87■■□□□ 1.41
SCARB1-206ENST00000539320 SCARA3Q6AZY7 606 aa23.87■■□□□ 1.41
SCARB1-206ENST00000539320 TOP6BLQ8N6T0 577 aa23.87■■□□□ 1.41
SCARB1-206ENST00000539320 OR5B17Q8NGF7 314 aa23.87■■□□□ 1.41
SCARB1-206ENST00000539320 LEO1Q8WVC0 666 aaPredicted RBP23.87■■□□□ 1.41
SCARB1-206ENST00000539320 BLZF1Q9H2G9 400 aa23.87■■□□□ 1.41
SCARB1-206ENST00000539320 AGPAT3Q9NRZ7 376 aa23.87■■□□□ 1.41
SCARB1-206ENST00000539320 TMLHEQ9NVH6 421 aa23.87■■□□□ 1.41
SCARB1-206ENST00000539320 SPATA6Q9NWH7 488 aaPredicted RBP23.87■■□□□ 1.41
SCARB1-206ENST00000539320 DDX43Q9NXZ2 648 aaKnown RBP23.87■■□□□ 1.41
SCARB1-206ENST00000539320 R3HCC1Q9Y3T6 440 aaKnown RBP23.87■■□□□ 1.41
SCARB1-206ENST00000539320 SNX9Q9Y5X1 595 aa23.87■■□□□ 1.41
SCARB1-206ENST00000539320 DMDP11532 3685 aa23.87■■□□□ 1.41
SCARB1-206ENST00000539320 PATJQ8NI35 1801 aa23.87■■□□□ 1.41
SCARB1-206ENST00000539320 SHISA7A6NL88 538 aa23.86■■□□□ 1.41
SCARB1-206ENST00000539320 MAN2B1O00754 1011 aa23.86■■□□□ 1.41
SCARB1-206ENST00000539320 NCAM2O15394 837 aa23.86■■□□□ 1.41
SCARB1-206ENST00000539320 SP9P0CG40 484 aa23.86■■□□□ 1.41
SCARB1-206ENST00000539320 CASP1P29466 404 aa23.86■■□□□ 1.41
SCARB1-206ENST00000539320 CYP4F8P98187 520 aa23.86■■□□□ 1.41
SCARB1-206ENST00000539320 INTS6LQ5JSJ4 861 aaKnown RBP23.86■■□□□ 1.41
SCARB1-206ENST00000539320 WDR49Q8IV35 697 aa23.86■■□□□ 1.41
SCARB1-206ENST00000539320 ARID3BQ8IVW6 561 aaPredicted RBP23.86■■□□□ 1.41
SCARB1-206ENST00000539320 NELFCDQ8IXH7 590 aa23.86■■□□□ 1.41
SCARB1-206ENST00000539320 YAF2Q8IY57 180 aa23.86■■□□□ 1.41
SCARB1-206ENST00000539320 ADGRF2Q8IZF7 708 aa23.86■■□□□ 1.41
SCARB1-206ENST00000539320 GIPC2Q8TF65 315 aa23.86■■□□□ 1.41
SCARB1-206ENST00000539320 SCFD1Q8WVM8 642 aa23.86■■□□□ 1.41
SCARB1-206ENST00000539320 CLDN23Q96B33 292 aa23.86■■□□□ 1.41
SCARB1-206ENST00000539320 ACBD6Q9BR61 282 aa23.86■■□□□ 1.41
SCARB1-206ENST00000539320 IL21Q9HBE4 155 aa23.86■■□□□ 1.41
SCARB1-206ENST00000539320 PIAS3Q9Y6X2 628 aa23.86■■□□□ 1.41
SCARB1-206ENST00000539320 EP300Q09472 2414 aaPredicted RBP23.86■■□□□ 1.41
SCARB1-206ENST00000539320 VPS13AQ96RL7 3174 aa23.86■■□□□ 1.41
SCARB1-206ENST00000539320 ACAT1P24752 427 aaKnown RBP23.85■■□□□ 1.41
SCARB1-206ENST00000539320 MYO1EQ12965 1108 aa23.85■■□□□ 1.41
SCARB1-206ENST00000539320 ZC3H14Q6PJT7 736 aaKnown RBP23.85■■□□□ 1.41
SCARB1-206ENST00000539320 HS2ST1Q7LGA3 356 aa23.85■■□□□ 1.41
SCARB1-206ENST00000539320 OSTM1Q86WC4 334 aa23.85■■□□□ 1.41
SCARB1-206ENST00000539320 TASP1Q9H6P5 420 aa23.85■■□□□ 1.41
SCARB1-206ENST00000539320 R4GN57 208 aa23.85■■□□□ 1.41
SCARB1-206ENST00000539320 FANCMQ8IYD8 2048 aa23.84■■□□□ 1.41
SCARB1-206ENST00000539320 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP23.84■■□□□ 1.41
SCARB1-206ENST00000539320 ARNTLO00327 626 aa23.84■■□□□ 1.41
SCARB1-206ENST00000539320 DPYSL4O14531 572 aa23.84■■□□□ 1.41
SCARB1-206ENST00000539320 CHADO15335 359 aa23.84■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms