RNA–Protein interactions for RNA: ENST00000539194.5

PROM1-219, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-219ENST00000539194 ECT2Q9H8V3 914 aa7.33□□□□□ -1.24
PROM1-219ENST00000539194 PPCSQ9HAB8 311 aa7.33□□□□□ -1.24
PROM1-219ENST00000539194 KIF9Q9HAQ2 790 aa7.33□□□□□ -1.24
PROM1-219ENST00000539194 SLC5A4Q9NY91 659 aa7.33□□□□□ -1.24
PROM1-219ENST00000539194 ZNF219Q9P2Y4 722 aaPredicted RBP7.33□□□□□ -1.24
PROM1-219ENST00000539194 SLC24A2Q9UI40 661 aa7.33□□□□□ -1.24
PROM1-219ENST00000539194 LNPEPQ9UIQ6 1025 aa7.33□□□□□ -1.24
PROM1-219ENST00000539194 SCAF8Q9UPN6 1271 aaKnown RBP7.33□□□□□ -1.24
PROM1-219ENST00000539194 AFG3L2Q9Y4W6 797 aa7.33□□□□□ -1.24
PROM1-219ENST00000539194 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.32□□□□□ -1.24
PROM1-219ENST00000539194 FAM47DPA6NHR8 397 aa7.32□□□□□ -1.24
PROM1-219ENST00000539194 SIGLEC16A6NMB1 481 aa7.32□□□□□ -1.24
PROM1-219ENST00000539194 NFKBIEO00221 500 aa7.32□□□□□ -1.24
PROM1-219ENST00000539194 ADCY3O60266 1144 aa7.32□□□□□ -1.24
PROM1-219ENST00000539194 GAS8O95995 478 aa7.32□□□□□ -1.24
PROM1-219ENST00000539194 WEE2P0C1S8 567 aa7.32□□□□□ -1.24
PROM1-219ENST00000539194 KRT10P13645 584 aa7.32□□□□□ -1.24
PROM1-219ENST00000539194 CD58P19256 250 aa7.32□□□□□ -1.24
PROM1-219ENST00000539194 MAGEA6P43360 314 aa7.32□□□□□ -1.24
PROM1-219ENST00000539194 IFNAR2P48551 515 aa7.32□□□□□ -1.24
PROM1-219ENST00000539194 TRIP13Q15645 432 aaPredicted RBP7.32□□□□□ -1.24
PROM1-219ENST00000539194 TFDP3Q5H9I0 405 aa7.32□□□□□ -1.24
PROM1-219ENST00000539194 FNBP1LQ5T0N5 605 aa7.32□□□□□ -1.24
PROM1-219ENST00000539194 USP37Q86T82 979 aa7.32□□□□□ -1.24
PROM1-219ENST00000539194 CPXCR1Q8N123 301 aa7.32□□□□□ -1.24
PROM1-219ENST00000539194 BANPQ8N9N5 519 aa7.32□□□□□ -1.24
PROM1-219ENST00000539194 DNERQ8NFT8 737 aa7.32□□□□□ -1.24
PROM1-219ENST00000539194 CMASQ8NFW8 434 aaPredicted RBP7.32□□□□□ -1.24
PROM1-219ENST00000539194 CCHCR1Q8TD31 782 aa7.32□□□□□ -1.24
PROM1-219ENST00000539194 TGS1Q96RS0 853 aaKnown RBP7.32□□□□□ -1.24
PROM1-219ENST00000539194 C11orf70Q9BRQ4 267 aa7.32□□□□□ -1.24
PROM1-219ENST00000539194 HEMGNQ9BXL5 484 aa7.32□□□□□ -1.24
PROM1-219ENST00000539194 SAMD15Q9P1V8 674 aa7.32□□□□□ -1.24
PROM1-219ENST00000539194 FBXO40Q9UH90 709 aa7.32□□□□□ -1.24
PROM1-219ENST00000539194 TRIM33Q9UPN9 1127 aa7.32□□□□□ -1.24
PROM1-219ENST00000539194 TESPA1A2RU30 521 aaPredicted RBP7.32□□□□□ -1.24
PROM1-219ENST00000539194 SPDYE16A6NNV3 312 aaPredicted RBP7.32□□□□□ -1.24
PROM1-219ENST00000539194 IGF2BP3O00425 579 aaKnown RBP eCLIP7.32□□□□□ -1.24
PROM1-219ENST00000539194 TLR3O15455 904 aaKnown RBP7.32□□□□□ -1.24
PROM1-219ENST00000539194 LRCH4O75427 683 aa7.32□□□□□ -1.24
PROM1-219ENST00000539194 LGR5O75473 907 aa7.32□□□□□ -1.24
PROM1-219ENST00000539194 DPEP1P16444 411 aa7.32□□□□□ -1.24
PROM1-219ENST00000539194 TSHRP16473 764 aa7.32□□□□□ -1.24
PROM1-219ENST00000539194 SLC8A1P32418 973 aa7.32□□□□□ -1.24
PROM1-219ENST00000539194 RPA3P35244 121 aaPredicted RBP7.32□□□□□ -1.24
PROM1-219ENST00000539194 GCKP35557 465 aa7.32□□□□□ -1.24
PROM1-219ENST00000539194 MAGEA3P43357 314 aa7.32□□□□□ -1.24
PROM1-219ENST00000539194 NR1H3Q13133 447 aa7.32□□□□□ -1.24
PROM1-219ENST00000539194 PKN2Q16513 984 aaKnown RBP7.32□□□□□ -1.24
PROM1-219ENST00000539194 ANKRD22Q5VYY1 191 aa7.32□□□□□ -1.24
PROM1-219ENST00000539194 CES4AQ5XG92 561 aa7.32□□□□□ -1.24
PROM1-219ENST00000539194 LINC01465Q8N7H1 131 aa7.32□□□□□ -1.24
PROM1-219ENST00000539194 SH3TC2Q8TF17 1288 aa7.32□□□□□ -1.24
PROM1-219ENST00000539194 C9orf72Q96LT7 481 aa7.32□□□□□ -1.24
PROM1-219ENST00000539194 ACO2Q99798 780 aaKnown RBP7.32□□□□□ -1.24
PROM1-219ENST00000539194 CXorf56Q9H5V9 222 aa7.32□□□□□ -1.24
PROM1-219ENST00000539194 VRTNQ9H8Y1 702 aa7.32□□□□□ -1.24
PROM1-219ENST00000539194 HOMER2Q9NSB8 354 aa7.32□□□□□ -1.24
PROM1-219ENST00000539194 RBAKQ9NYW8 714 aaPredicted RBP7.32□□□□□ -1.24
PROM1-219ENST00000539194 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.32□□□□□ -1.24
PROM1-219ENST00000539194 PPME1Q9Y570 386 aa7.32□□□□□ -1.24
PROM1-219ENST00000539194 LTBP3Q9NS15 1303 aa7.32□□□□□ -1.24
PROM1-219ENST00000539194 A0A1W2PPM1 405 aa7.32□□□□□ -1.24
PROM1-219ENST00000539194 SMIM23A6NLE4 172 aa7.32□□□□□ -1.24
PROM1-219ENST00000539194 DKC1O60832 514 aaKnown RBP eCLIP7.32□□□□□ -1.24
PROM1-219ENST00000539194 LDHAP00338 332 aaKnown RBP7.32□□□□□ -1.24
PROM1-219ENST00000539194 MYCLP12524 364 aaPredicted RBP7.32□□□□□ -1.24
PROM1-219ENST00000539194 NEK3P51956 506 aa7.32□□□□□ -1.24
PROM1-219ENST00000539194 POLGP54098 1239 aaPredicted RBP7.32□□□□□ -1.24
PROM1-219ENST00000539194 LLGL1Q15334 1064 aa7.32□□□□□ -1.24
PROM1-219ENST00000539194 SLFN12LQ6IEE8 588 aa7.32□□□□□ -1.24
PROM1-219ENST00000539194 ARHGEF18Q6ZSZ5 1173 aa7.32□□□□□ -1.24
PROM1-219ENST00000539194 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.32□□□□□ -1.24
PROM1-219ENST00000539194 PTCD3Q96EY7 689 aaKnown RBP7.32□□□□□ -1.24
PROM1-219ENST00000539194 RBM41Q96IZ5 413 aaKnown RBP7.32□□□□□ -1.24
PROM1-219ENST00000539194 TTC25Q96NG3 672 aa7.32□□□□□ -1.24
PROM1-219ENST00000539194 MYCBPQ99417 103 aaPredicted RBP7.32□□□□□ -1.24
PROM1-219ENST00000539194 PLCD4Q9BRC7 762 aa7.32□□□□□ -1.24
PROM1-219ENST00000539194 FRMD8P1Q9BZ68 369 aaPredicted RBP7.32□□□□□ -1.24
PROM1-219ENST00000539194 MYLK2Q9H1R3 596 aa7.32□□□□□ -1.24
PROM1-219ENST00000539194 VEZTQ9HBM0 779 aa7.32□□□□□ -1.24
PROM1-219ENST00000539194 PNPLA8Q9NP80 782 aa7.32□□□□□ -1.24
PROM1-219ENST00000539194 TJP2Q9UDY2 1190 aa7.32□□□□□ -1.24
PROM1-219ENST00000539194 ASIC3Q9UHC3 531 aa7.32□□□□□ -1.24
PROM1-219ENST00000539194 SIX4Q9UIU6 781 aa7.32□□□□□ -1.24
PROM1-219ENST00000539194 TCRBV7S3A2A0A539 114 aa7.31□□□□□ -1.24
PROM1-219ENST00000539194 FZD9O00144 591 aa7.31□□□□□ -1.24
PROM1-219ENST00000539194 THAP12O43422 761 aa7.31□□□□□ -1.24
PROM1-219ENST00000539194 SUN1O94901 812 aa7.31□□□□□ -1.24
PROM1-219ENST00000539194 ADCY8P40145 1251 aa7.31□□□□□ -1.24
PROM1-219ENST00000539194 CNTN2Q02246 1040 aa7.31□□□□□ -1.24
PROM1-219ENST00000539194 SLC18A2Q05940 514 aa7.31□□□□□ -1.24
PROM1-219ENST00000539194 NEDD9Q14511 834 aa7.31□□□□□ -1.24
PROM1-219ENST00000539194 PTPN20Q4JDL3 420 aa7.31□□□□□ -1.24
PROM1-219ENST00000539194 NBPF12Q5TAG4 269 aaPredicted RBP7.31□□□□□ -1.24
PROM1-219ENST00000539194 NUGGCQ68CJ6 796 aa7.31□□□□□ -1.24
PROM1-219ENST00000539194 TMEM270Q6UE05 265 aa7.31□□□□□ -1.24
PROM1-219ENST00000539194 PPP1R21Q6ZMI0 780 aa7.31□□□□□ -1.24
PROM1-219ENST00000539194 BBS12Q6ZW61 710 aa7.31□□□□□ -1.24
PROM1-219ENST00000539194 CCDC63Q8NA47 563 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 191.8 ms