RNA–Protein interactions for RNA: ENST00000539176.1

KLHL42-202, Transcript of kelch like family member 42, humanhuman

TSL 3

Gene KLHL42, Length 1,894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL42-202ENST00000539176 RBP5P82980 135 aa27.04■■□□□ 1.92
KLHL42-202ENST00000539176 SOX4Q06945 474 aaPredicted RBP27.04■■□□□ 1.92
KLHL42-202ENST00000539176 PTPROQ16827 1216 aa27.04■■□□□ 1.92
KLHL42-202ENST00000539176 ZNF667Q5HYK9 610 aa27.04■■□□□ 1.92
KLHL42-202ENST00000539176 UBR7Q8N806 425 aa27.04■■□□□ 1.92
KLHL42-202ENST00000539176 SDCBP2Q9H190 292 aa27.04■■□□□ 1.92
KLHL42-202ENST00000539176 KCNE1P15382 129 aa27.03■■□□□ 1.92
KLHL42-202ENST00000539176 RNASE9P60153 205 aaKnown RBP27.03■■□□□ 1.92
KLHL42-202ENST00000539176 TRIM60Q495X7 471 aa27.03■■□□□ 1.92
KLHL42-202ENST00000539176 AGMOQ6ZNB7 445 aa27.03■■□□□ 1.92
KLHL42-202ENST00000539176 RNPC3Q96LT9 517 aaKnown RBP27.03■■□□□ 1.92
KLHL42-202ENST00000539176 GAD1Q99259 594 aa27.03■■□□□ 1.92
KLHL42-202ENST00000539176 ZSWIM1Q9BR11 485 aa27.03■■□□□ 1.92
KLHL42-202ENST00000539176 SEZ6LQ9BYH1 1024 aa27.03■■□□□ 1.92
KLHL42-202ENST00000539176 SMYD3Q9H7B4 428 aa27.03■■□□□ 1.92
KLHL42-202ENST00000539176 SQORQ9Y6N5 450 aa27.03■■□□□ 1.92
KLHL42-202ENST00000539176 GOLGA6L10A0A0M3HER8 536 aa27.02■■□□□ 1.92
KLHL42-202ENST00000539176 GLI1P08151 1106 aa27.02■■□□□ 1.92
KLHL42-202ENST00000539176 ATF7P17544 494 aaPredicted RBP27.02■■□□□ 1.92
KLHL42-202ENST00000539176 CDH8P55286 799 aa27.02■■□□□ 1.92
KLHL42-202ENST00000539176 CENPCQ03188 943 aa27.02■■□□□ 1.92
KLHL42-202ENST00000539176 RTN4RL1Q86UN2 441 aaPredicted RBP27.02■■□□□ 1.92
KLHL42-202ENST00000539176 RBBP8NLQ8NC74 664 aaPredicted RBP27.02■■□□□ 1.92
KLHL42-202ENST00000539176 FAM71BQ8TC56 605 aa27.02■■□□□ 1.92
KLHL42-202ENST00000539176 ST7Q9NRC1 585 aa27.02■■□□□ 1.92
KLHL42-202ENST00000539176 UBQLN1Q9UMX0 589 aaKnown RBP27.02■■□□□ 1.92
KLHL42-202ENST00000539176 RAD51CO43502 376 aa27.02■■□□□ 1.92
KLHL42-202ENST00000539176 CYP1A1P04798 512 aaPredicted RBP27.02■■□□□ 1.92
KLHL42-202ENST00000539176 GUCY2DQ02846 1103 aa27.02■■□□□ 1.92
KLHL42-202ENST00000539176 BFSP2Q13515 415 aa27.02■■□□□ 1.92
KLHL42-202ENST00000539176 GPNMBQ14956 572 aa27.02■■□□□ 1.92
KLHL42-202ENST00000539176 MAATS1Q7Z4T9 603 aa27.02■■□□□ 1.92
KLHL42-202ENST00000539176 GSPT2Q8IYD1 628 aaKnown RBP27.02■■□□□ 1.92
KLHL42-202ENST00000539176 CISHQ9NSE2 258 aa27.02■■□□□ 1.92
KLHL42-202ENST00000539176 MIOSQ9NXC5 875 aa27.02■■□□□ 1.92
KLHL42-202ENST00000539176 CACNG4Q9UBN1 327 aa27.02■■□□□ 1.92
KLHL42-202ENST00000539176 CCDC66A2RUB6 948 aa27.01■■□□□ 1.91
KLHL42-202ENST00000539176 NBNO60934 754 aa27.01■■□□□ 1.91
KLHL42-202ENST00000539176 FGGP02679 453 aa27.01■■□□□ 1.91
KLHL42-202ENST00000539176 CUL1Q13616 776 aa27.01■■□□□ 1.91
KLHL42-202ENST00000539176 TERF2Q15554 542 aa27.01■■□□□ 1.91
KLHL42-202ENST00000539176 ZNF394Q53GI3 561 aa27.01■■□□□ 1.91
KLHL42-202ENST00000539176 DCAF12L1Q5VU92 463 aa27.01■■□□□ 1.91
KLHL42-202ENST00000539176 MRPL10Q7Z7H8 261 aaKnown RBP27.01■■□□□ 1.91
KLHL42-202ENST00000539176 KLHL7Q8IXQ5 586 aa27.01■■□□□ 1.91
KLHL42-202ENST00000539176 CCDC26Q8TAB7 109 aa27.01■■□□□ 1.91
KLHL42-202ENST00000539176 LINC01599Q8WXQ3 324 aa27.01■■□□□ 1.91
KLHL42-202ENST00000539176 EPB41L5Q9HCM4 733 aa27.01■■□□□ 1.91
KLHL42-202ENST00000539176 CNOT8Q9UFF9 292 aaKnown RBP27.01■■□□□ 1.91
KLHL42-202ENST00000539176 SCN5AQ14524 2016 aa27.01■■□□□ 1.91
KLHL42-202ENST00000539176 H3BQF6 201 aa27■■□□□ 1.91
KLHL42-202ENST00000539176 CTNNA2P26232 953 aa27■■□□□ 1.91
KLHL42-202ENST00000539176 ATICP31939 592 aa27■■□□□ 1.91
KLHL42-202ENST00000539176 SSTR3P32745 418 aaPredicted RBP27■■□□□ 1.91
KLHL42-202ENST00000539176 NSFP46459 744 aaKnown RBP27■■□□□ 1.91
KLHL42-202ENST00000539176 TLE2Q04725 743 aa27■■□□□ 1.91
KLHL42-202ENST00000539176 PKN2Q16513 984 aaKnown RBP27■■□□□ 1.91
KLHL42-202ENST00000539176 C9orf57Q5W0N0 161 aa27■■□□□ 1.91
KLHL42-202ENST00000539176 MCOLN2Q8IZK6 566 aa27■■□□□ 1.91
KLHL42-202ENST00000539176 GSTCDQ8NEC7 633 aa27■■□□□ 1.91
KLHL42-202ENST00000539176 VCPIP1Q96JH7 1222 aa27■■□□□ 1.91
KLHL42-202ENST00000539176 A0A0U1RQF3 1178 aa27■■□□□ 1.91
KLHL42-202ENST00000539176 TLR3O15455 904 aaKnown RBP27■■□□□ 1.91
KLHL42-202ENST00000539176 SART1O43290 800 aaKnown RBP27■■□□□ 1.91
KLHL42-202ENST00000539176 GNA15P30679 374 aa27■■□□□ 1.91
KLHL42-202ENST00000539176 GJA8P48165 433 aa27■■□□□ 1.91
KLHL42-202ENST00000539176 ZNF132P52740 706 aa27■■□□□ 1.91
KLHL42-202ENST00000539176 MESDQ14696 234 aa27■■□□□ 1.91
KLHL42-202ENST00000539176 SND1Q7KZF4 910 aaKnown RBP eCLIP27■■□□□ 1.91
KLHL42-202ENST00000539176 HACE1Q8IYU2 909 aa27■■□□□ 1.91
KLHL42-202ENST00000539176 CD101Q93033 1021 aa27■■□□□ 1.91
KLHL42-202ENST00000539176 PPP1R10Q96QC0 940 aaKnown RBP27■■□□□ 1.91
KLHL42-202ENST00000539176 BCO2Q9BYV7 579 aa27■■□□□ 1.91
KLHL42-202ENST00000539176 ATMINO43313 823 aaPredicted RBP26.99■■□□□ 1.91
KLHL42-202ENST00000539176 COL6A1P12109 1028 aa26.99■■□□□ 1.91
KLHL42-202ENST00000539176 COMTP21964 271 aa26.99■■□□□ 1.91
KLHL42-202ENST00000539176 CTNNA1P35221 906 aaKnown RBP26.99■■□□□ 1.91
KLHL42-202ENST00000539176 FAAP100Q0VG06 881 aa26.99■■□□□ 1.91
KLHL42-202ENST00000539176 WHAMMQ8TF30 809 aa26.99■■□□□ 1.91
KLHL42-202ENST00000539176 ALG3Q92685 438 aa26.99■■□□□ 1.91
KLHL42-202ENST00000539176 SCLYQ96I15 445 aa26.99■■□□□ 1.91
KLHL42-202ENST00000539176 FAXDC2Q96IV6 333 aa26.99■■□□□ 1.91
KLHL42-202ENST00000539176 TRAIPQ9BWF2 469 aa26.99■■□□□ 1.91
KLHL42-202ENST00000539176 AP1M1Q9BXS5 423 aa26.99■■□□□ 1.91
KLHL42-202ENST00000539176 PPP1R12CQ9BZL4 782 aa26.99■■□□□ 1.91
KLHL42-202ENST00000539176 VRTNQ9H8Y1 702 aa26.99■■□□□ 1.91
KLHL42-202ENST00000539176 TET1Q8NFU7 2136 aa26.99■■□□□ 1.91
KLHL42-202ENST00000539176 ARL5CA6NH57 179 aa26.98■■□□□ 1.91
KLHL42-202ENST00000539176 ZNF623O75123 536 aa26.98■■□□□ 1.91
KLHL42-202ENST00000539176 RAB27AP51159 221 aa26.98■■□□□ 1.91
KLHL42-202ENST00000539176 ORC1Q13415 861 aa26.98■■□□□ 1.91
KLHL42-202ENST00000539176 ANKRD33Q7Z3H0 272 aa26.98■■□□□ 1.91
KLHL42-202ENST00000539176 ECHDC2Q86YB7 292 aa26.98■■□□□ 1.91
KLHL42-202ENST00000539176 KIAA0100Q14667 2235 aaKnown RBP26.98■■□□□ 1.91
KLHL42-202ENST00000539176 BHMG1C9JSJ3 638 aaPredicted RBP26.98■■□□□ 1.91
KLHL42-202ENST00000539176 SPOPO43791 374 aa26.98■■□□□ 1.91
KLHL42-202ENST00000539176 SCNN1GP51170 649 aa26.98■■□□□ 1.91
KLHL42-202ENST00000539176 CCL23P55773 120 aa26.98■■□□□ 1.91
KLHL42-202ENST00000539176 MRPS25P82663 173 aaKnown RBP26.98■■□□□ 1.91
KLHL42-202ENST00000539176 ATP11BQ9Y2G3 1177 aa26.98■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms