RNA–Protein interactions for RNA: ENST00000538827.5

CD4-208, Transcript of CD4 molecule, humanhuman

TSL 1 (best)

Gene CD4, Length 985 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-208ENST00000538827 ACRBPQ8NEB7 543 aa15.07■□□□□ 0
CD4-208ENST00000538827 KBTBD7Q8WVZ9 684 aa15.07■□□□□ 0
CD4-208ENST00000538827 HERVK_113Q902F9 699 aa15.07■□□□□ 0
CD4-208ENST00000538827 TIFAQ96CG3 184 aa15.07■□□□□ 0
CD4-208ENST00000538827 TWNKQ96RR1 684 aa15.07■□□□□ 0
CD4-208ENST00000538827 SLC9A7Q96T83 725 aa15.07■□□□□ 0
CD4-208ENST00000538827 AGPAT1Q99943 283 aa15.07■□□□□ 0
CD4-208ENST00000538827 COLEC11Q9BWP8 271 aa15.07■□□□□ 0
CD4-208ENST00000538827 NOCTQ9UK39 431 aaKnown RBP15.07■□□□□ 0
CD4-208ENST00000538827 BARX2Q9UMQ3 279 aaPredicted RBP15.07■□□□□ 0
CD4-208ENST00000538827 TIMM13Q9Y5L4 95 aaPredicted RBP15.07■□□□□ 0
CD4-208ENST00000538827 SLC4A7Q9Y6M7 1214 aa15.07■□□□□ 0
CD4-208ENST00000538827 NLRC5Q86WI3 1866 aa15.07■□□□□ 0
CD4-208ENST00000538827 GBF1Q92538 1859 aa15.07■□□□□ 0
CD4-208ENST00000538827 VWA8A3KMH1 1905 aa15.07■□□□□ 0
CD4-208ENST00000538827 A8MXQ7 604 aa15.06■□□□□ 0
CD4-208ENST00000538827 TMEM189-UBE2V1I3L0A0 370 aa15.06■□□□□ 0
CD4-208ENST00000538827 HCRTO43612 131 aa15.06■□□□□ 0
CD4-208ENST00000538827 TACC1O75410 805 aa15.06■□□□□ 0
CD4-208ENST00000538827 NDUFA10O95299 355 aa15.06■□□□□ 0
CD4-208ENST00000538827 MMEP08473 750 aa15.06■□□□□ 0
CD4-208ENST00000538827 WARSP23381 471 aaKnown RBP15.06■□□□□ 0
CD4-208ENST00000538827 PAX3P23760 479 aa15.06■□□□□ 0
CD4-208ENST00000538827 AARSP49588 968 aaKnown RBP eCLIP15.06■□□□□ 0
CD4-208ENST00000538827 RAD23BP54727 409 aa15.06■□□□□ 0
CD4-208ENST00000538827 GFPT1Q06210 699 aaPredicted RBP15.06■□□□□ 0
CD4-208ENST00000538827 GLYCTKQ8IVS8 523 aa15.06■□□□□ 0
CD4-208ENST00000538827 CCDC170Q8IYT3 715 aa15.06■□□□□ 0
CD4-208ENST00000538827 LNX1Q8TBB1 728 aaPredicted RBP15.06■□□□□ 0
CD4-208ENST00000538827 ZNF689Q96CS4 500 aaPredicted RBP15.06■□□□□ 0
CD4-208ENST00000538827 SUSD3Q96L08 255 aa15.06■□□□□ 0
CD4-208ENST00000538827 LRFN3Q9BTN0 628 aa15.06■□□□□ 0
CD4-208ENST00000538827 NT5C1AQ9BXI3 368 aa15.06■□□□□ 0
CD4-208ENST00000538827 DNAI2Q9GZS0 605 aa15.06■□□□□ 0
CD4-208ENST00000538827 CWH43Q9H720 699 aa15.06■□□□□ 0
CD4-208ENST00000538827 RC3H2Q9HBD1 1191 aaKnown RBP15.06■□□□□ 0
CD4-208ENST00000538827 MARCH5Q9NX47 278 aa15.06■□□□□ 0
CD4-208ENST00000538827 PCDHB8Q9UN66 801 aa15.06■□□□□ 0
CD4-208ENST00000538827 CNTN6Q9UQ52 1028 aa15.06■□□□□ 0
CD4-208ENST00000538827 MRPL42Q9Y6G3 142 aaKnown RBP15.06■□□□□ 0
CD4-208ENST00000538827 ALDH2P05091 517 aa15.05■□□□□ -0
CD4-208ENST00000538827 PDGFRBP09619 1106 aa15.05■□□□□ -0
CD4-208ENST00000538827 ATP2A2P16615 1042 aaKnown RBP15.05■□□□□ -0
CD4-208ENST00000538827 LAG3P18627 525 aa15.05■□□□□ -0
CD4-208ENST00000538827 ACAT1P24752 427 aaKnown RBP15.05■□□□□ -0
CD4-208ENST00000538827 MSNP26038 577 aaKnown RBP15.05■□□□□ -0
CD4-208ENST00000538827 PSMC1P62191 440 aaKnown RBP15.05■□□□□ -0
CD4-208ENST00000538827 SPA17Q15506 151 aa15.05■□□□□ -0
CD4-208ENST00000538827 CD300LGQ6UXG3 332 aa15.05■□□□□ -0
CD4-208ENST00000538827 KIAA1328Q86T90 577 aa15.05■□□□□ -0
CD4-208ENST00000538827 ACOT1Q86TX2 421 aa15.05■□□□□ -0
CD4-208ENST00000538827 PASD1Q8IV76 773 aa15.05■□□□□ -0
CD4-208ENST00000538827 TMEM86AQ8N2M4 240 aa15.05■□□□□ -0
CD4-208ENST00000538827 SLC4A11Q8NBS3 891 aa15.05■□□□□ -0
CD4-208ENST00000538827 WHAMMQ8TF30 809 aa15.05■□□□□ -0
CD4-208ENST00000538827 TMEM176AQ96HP8 235 aa15.05■□□□□ -0
CD4-208ENST00000538827 HEXIM2Q96MH2 286 aaKnown RBP15.05■□□□□ -0
CD4-208ENST00000538827 ZNF558Q96NG5 402 aa15.05■□□□□ -0
CD4-208ENST00000538827 DPEP3Q9H4B8 488 aa15.05■□□□□ -0
CD4-208ENST00000538827 FAM49BQ9NUQ9 324 aa15.05■□□□□ -0
CD4-208ENST00000538827 DDX43Q9NXZ2 648 aaKnown RBP15.05■□□□□ -0
CD4-208ENST00000538827 ADAM28Q9UKQ2 775 aa15.05■□□□□ -0
CD4-208ENST00000538827 EPN1Q9Y6I3 576 aaPredicted RBP15.05■□□□□ -0
CD4-208ENST00000538827 SF3B1O75533 1304 aaKnown RBP eCLIP15.05■□□□□ -0
CD4-208ENST00000538827 MYH10P35580 1976 aa15.05■□□□□ -0
CD4-208ENST00000538827 EIF3CLB5ME19 914 aaKnown RBP15.04■□□□□ -0
CD4-208ENST00000538827 M0QZQ0 153 aa15.04■□□□□ -0
CD4-208ENST00000538827 DDX3XO00571 662 aaKnown RBP eCLIP15.04■□□□□ -0
CD4-208ENST00000538827 MED7O43513 233 aa15.04■□□□□ -0
CD4-208ENST00000538827 TRAPPC3O43617 180 aa15.04■□□□□ -0
CD4-208ENST00000538827 GJB5O95377 273 aa15.04■□□□□ -0
CD4-208ENST00000538827 GALTP07902 379 aa15.04■□□□□ -0
CD4-208ENST00000538827 PAEPP09466 180 aa15.04■□□□□ -0
CD4-208ENST00000538827 ANXA13P27216 316 aa15.04■□□□□ -0
CD4-208ENST00000538827 TKTP29401 623 aaKnown RBP15.04■□□□□ -0
CD4-208ENST00000538827 GNL1P36915 607 aaPredicted RBP15.04■□□□□ -0
CD4-208ENST00000538827 ALDH7A1P49419 539 aaKnown RBP15.04■□□□□ -0
CD4-208ENST00000538827 FMO1Q01740 532 aa15.04■□□□□ -0
CD4-208ENST00000538827 CDR2Q01850 454 aa15.04■□□□□ -0
CD4-208ENST00000538827 BMS1Q14692 1282 aaKnown RBP15.04■□□□□ -0
CD4-208ENST00000538827 AAK1Q2M2I8 961 aa15.04■□□□□ -0
CD4-208ENST00000538827 SGO2Q562F6 1265 aa15.04■□□□□ -0
CD4-208ENST00000538827 FUT10Q6P4F1 479 aa15.04■□□□□ -0
CD4-208ENST00000538827 ZSCAN30Q86W11 494 aa15.04■□□□□ -0
CD4-208ENST00000538827 UNC93AQ86WB7 457 aa15.04■□□□□ -0
CD4-208ENST00000538827 CEP57Q86XR8 500 aa15.04■□□□□ -0
CD4-208ENST00000538827 ZNF677Q86XU0 584 aa15.04■□□□□ -0
CD4-208ENST00000538827 HERC6Q8IVU3 1022 aa15.04■□□□□ -0
CD4-208ENST00000538827 C17orf53Q8N3J3 647 aaPredicted RBP15.04■□□□□ -0
CD4-208ENST00000538827 COLGALT1Q8NBJ5 622 aa15.04■□□□□ -0
CD4-208ENST00000538827 BCL7CQ8WUZ0 217 aaPredicted RBP15.04■□□□□ -0
CD4-208ENST00000538827 EIF3CQ99613 913 aaKnown RBP15.04■□□□□ -0
CD4-208ENST00000538827 FAM124BQ9H5Z6 455 aaPredicted RBP15.04■□□□□ -0
CD4-208ENST00000538827 ADAMTS1Q9UHI8 967 aa15.04■□□□□ -0
CD4-208ENST00000538827 DSEQ9UL01 958 aa15.04■□□□□ -0
CD4-208ENST00000538827 NME7Q9Y5B8 376 aa15.04■□□□□ -0
CD4-208ENST00000538827 MYO9BQ13459 2157 aa15.04■□□□□ -0
CD4-208ENST00000538827 A0A087X0T9 212 aa15.03■□□□□ -0
CD4-208ENST00000538827 TMCO5BA8MYB1 307 aa15.03■□□□□ -0
CD4-208ENST00000538827 M0QYV0 167 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms