RNA–Protein interactions for RNA: ENST00000538570.5

COL4A6-208, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-208ENST00000538570 PECAM1P16284 738 aaPredicted RBP10.37□□□□□ -0.75
COL4A6-208ENST00000538570 RBP5P82980 135 aa10.37□□□□□ -0.75
COL4A6-208ENST00000538570 HLFQ16534 295 aa10.37□□□□□ -0.75
COL4A6-208ENST00000538570 KYNUQ16719 465 aa10.37□□□□□ -0.75
COL4A6-208ENST00000538570 EFL1Q7Z2Z2 1120 aaKnown RBP10.37□□□□□ -0.75
COL4A6-208ENST00000538570 TMEM110Q86TL2 294 aa10.37□□□□□ -0.75
COL4A6-208ENST00000538570 METTL16Q86W50 562 aaKnown RBP10.37□□□□□ -0.75
COL4A6-208ENST00000538570 NSL1Q96IY1 281 aa10.37□□□□□ -0.75
COL4A6-208ENST00000538570 LATS2Q9NRM7 1088 aa10.37□□□□□ -0.75
COL4A6-208ENST00000538570 POLBP06746 335 aa10.37□□□□□ -0.75
COL4A6-208ENST00000538570 CAPZA2P47755 286 aa10.37□□□□□ -0.75
COL4A6-208ENST00000538570 DPF2Q92785 391 aa10.37□□□□□ -0.75
COL4A6-208ENST00000538570 SRPK1Q96SB4 655 aaKnown RBP10.37□□□□□ -0.75
COL4A6-208ENST00000538570 RBBP8Q99708 897 aa10.37□□□□□ -0.75
COL4A6-208ENST00000538570 YIPF2Q9BWQ6 316 aa10.37□□□□□ -0.75
COL4A6-208ENST00000538570 MANSC1Q9H8J5 431 aa10.37□□□□□ -0.75
COL4A6-208ENST00000538570 JPH1Q9HDC5 661 aaPredicted RBP10.37□□□□□ -0.75
COL4A6-208ENST00000538570 AGAP1Q9UPQ3 857 aa10.37□□□□□ -0.75
COL4A6-208ENST00000538570 TMEM120BA0PK00 339 aa10.37□□□□□ -0.75
COL4A6-208ENST00000538570 CCDC189A1A4V9 331 aa10.37□□□□□ -0.75
COL4A6-208ENST00000538570 ALDH1A1P00352 501 aa10.37□□□□□ -0.75
COL4A6-208ENST00000538570 ZCCHC18P0CG32 403 aa10.37□□□□□ -0.75
COL4A6-208ENST00000538570 MAGEA4P43358 317 aa10.37□□□□□ -0.75
COL4A6-208ENST00000538570 FMO5P49326 533 aa10.37□□□□□ -0.75
COL4A6-208ENST00000538570 MTFR1Q15390 333 aa10.37□□□□□ -0.75
COL4A6-208ENST00000538570 C3orf62Q6ZUJ4 267 aa10.37□□□□□ -0.75
COL4A6-208ENST00000538570 NMD3Q96D46 503 aaKnown RBP10.37□□□□□ -0.75
COL4A6-208ENST00000538570 HES6Q96HZ4 224 aa10.37□□□□□ -0.75
COL4A6-208ENST00000538570 RABL2AQ9UBK7 228 aaPredicted RBP10.37□□□□□ -0.75
COL4A6-208ENST00000538570 CPDO75976 1380 aa10.37□□□□□ -0.75
COL4A6-208ENST00000538570 PLEKHG2Q9H7P9 1386 aa10.37□□□□□ -0.75
COL4A6-208ENST00000538570 TNPO2O14787 897 aaKnown RBP10.37□□□□□ -0.75
COL4A6-208ENST00000538570 STRNO43815 780 aa10.37□□□□□ -0.75
COL4A6-208ENST00000538570 PYGMP11217 842 aa10.37□□□□□ -0.75
COL4A6-208ENST00000538570 RGS4P49798 205 aa10.37□□□□□ -0.75
COL4A6-208ENST00000538570 RGS7P49802 495 aa10.37□□□□□ -0.75
COL4A6-208ENST00000538570 APOBEC3FQ8IUX4 373 aaKnown RBP10.37□□□□□ -0.75
COL4A6-208ENST00000538570 VPS50Q96JG6 964 aa10.37□□□□□ -0.75
COL4A6-208ENST00000538570 OSBPL10Q9BXB5 764 aa10.37□□□□□ -0.75
COL4A6-208ENST00000538570 EURLQ9NYK6 297 aa10.37□□□□□ -0.75
COL4A6-208ENST00000538570 LSM7Q9UK45 103 aaKnown RBP10.37□□□□□ -0.75
COL4A6-208ENST00000538570 ASB14A6NK59 587 aa10.36□□□□□ -0.75
COL4A6-208ENST00000538570 DNALI1O14645 258 aaPredicted RBP10.36□□□□□ -0.75
COL4A6-208ENST00000538570 TRAPPC3O43617 180 aa10.36□□□□□ -0.75
COL4A6-208ENST00000538570 PEX14O75381 377 aa10.36□□□□□ -0.75
COL4A6-208ENST00000538570 RPS6P62753 249 aaKnown RBP10.36□□□□□ -0.75
COL4A6-208ENST00000538570 NCAPD2Q15021 1401 aa10.36□□□□□ -0.75
COL4A6-208ENST00000538570 NAB2Q15742 525 aa10.36□□□□□ -0.75
COL4A6-208ENST00000538570 MFSD14CQ5VZR4 134 aa10.36□□□□□ -0.75
COL4A6-208ENST00000538570 SGMS1Q86VZ5 419 aa10.36□□□□□ -0.75
COL4A6-208ENST00000538570 DDI1Q8WTU0 396 aa10.36□□□□□ -0.75
COL4A6-208ENST00000538570 ARAP3Q8WWN8 1544 aa10.36□□□□□ -0.75
COL4A6-208ENST00000538570 MCRS1Q96EZ8 462 aa10.36□□□□□ -0.75
COL4A6-208ENST00000538570 CNDP1Q96KN2 507 aa10.36□□□□□ -0.75
COL4A6-208ENST00000538570 TRPC7Q9HCX4 862 aa10.36□□□□□ -0.75
COL4A6-208ENST00000538570 ALBP02768 609 aa10.36□□□□□ -0.75
COL4A6-208ENST00000538570 PDHBP11177 359 aa10.36□□□□□ -0.75
COL4A6-208ENST00000538570 ST8SIA6P61647 398 aa10.36□□□□□ -0.75
COL4A6-208ENST00000538570 HPCAP84074 193 aa10.36□□□□□ -0.75
COL4A6-208ENST00000538570 CCDC149Q6ZUS6 474 aa10.36□□□□□ -0.75
COL4A6-208ENST00000538570 JAMLQ86YT9 394 aa10.36□□□□□ -0.75
COL4A6-208ENST00000538570 MICU2Q8IYU8 434 aa10.36□□□□□ -0.75
COL4A6-208ENST00000538570 SCFD2Q8WU76 684 aa10.36□□□□□ -0.75
COL4A6-208ENST00000538570 APPL1Q9UKG1 709 aa10.36□□□□□ -0.75
COL4A6-208ENST00000538570 PIN4Q9Y237 131 aaKnown RBP10.36□□□□□ -0.75
COL4A6-208ENST00000538570 SHROOM2Q13796 1616 aa10.36□□□□□ -0.75
COL4A6-208ENST00000538570 EVPLLA8MZ36 301 aa10.36□□□□□ -0.75
COL4A6-208ENST00000538570 SLC26A4O43511 780 aa10.36□□□□□ -0.75
COL4A6-208ENST00000538570 NQO1P15559 274 aaKnown RBP10.36□□□□□ -0.75
COL4A6-208ENST00000538570 SOAT1P35610 550 aa10.36□□□□□ -0.75
COL4A6-208ENST00000538570 SOX11P35716 441 aa10.36□□□□□ -0.75
COL4A6-208ENST00000538570 SGSM1Q2NKQ1 1148 aa10.36□□□□□ -0.75
COL4A6-208ENST00000538570 C4orf22Q6V702 233 aa10.36□□□□□ -0.75
COL4A6-208ENST00000538570 EGFL6Q8IUX8 553 aa10.36□□□□□ -0.75
COL4A6-208ENST00000538570 RBBP8NLQ8NC74 664 aaPredicted RBP10.36□□□□□ -0.75
COL4A6-208ENST00000538570 OR2W6PQ8NHA6 318 aa10.36□□□□□ -0.75
COL4A6-208ENST00000538570 E2F7Q96AV8 911 aa10.36□□□□□ -0.75
COL4A6-208ENST00000538570 WNK4Q96J92 1243 aa10.36□□□□□ -0.75
COL4A6-208ENST00000538570 C7orf25Q9BPX7 421 aa10.36□□□□□ -0.75
COL4A6-208ENST00000538570 TRIM9Q9C026 710 aa10.36□□□□□ -0.75
COL4A6-208ENST00000538570 CCSER1Q9C0I3 900 aa10.36□□□□□ -0.75
COL4A6-208ENST00000538570 RBM12Q9NTZ6 932 aaKnown RBP10.36□□□□□ -0.75
COL4A6-208ENST00000538570 DTNAQ9Y4J8 743 aa10.36□□□□□ -0.75
COL4A6-208ENST00000538570 RAD51CO43502 376 aa10.36□□□□□ -0.75
COL4A6-208ENST00000538570 DGKIO75912 1065 aa10.36□□□□□ -0.75
COL4A6-208ENST00000538570 UCHL3P15374 230 aa10.36□□□□□ -0.75
COL4A6-208ENST00000538570 NCALDP61601 193 aa10.36□□□□□ -0.75
COL4A6-208ENST00000538570 CENPCQ03188 943 aa10.36□□□□□ -0.75
COL4A6-208ENST00000538570 SPP2Q13103 211 aa10.36□□□□□ -0.75
COL4A6-208ENST00000538570 NCOA4Q13772 614 aa10.36□□□□□ -0.75
COL4A6-208ENST00000538570 TMEM132DQ14C87 1099 aa10.36□□□□□ -0.75
COL4A6-208ENST00000538570 TRIP4Q15650 581 aaPredicted RBP10.36□□□□□ -0.75
COL4A6-208ENST00000538570 EPHA10Q5JZY3 1008 aa10.36□□□□□ -0.75
COL4A6-208ENST00000538570 E4F1Q66K89 784 aaPredicted RBP10.36□□□□□ -0.75
COL4A6-208ENST00000538570 PTRHD1Q6GMV3 140 aaKnown RBP10.36□□□□□ -0.75
COL4A6-208ENST00000538570 SPATA16Q9BXB7 569 aa10.36□□□□□ -0.75
COL4A6-208ENST00000538570 BBS2Q9BXC9 721 aa10.36□□□□□ -0.75
COL4A6-208ENST00000538570 IL1RL2Q9HB29 575 aa10.36□□□□□ -0.75
COL4A6-208ENST00000538570 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.36□□□□□ -0.75
COL4A6-208ENST00000538570 RABL2BQ9UNT1 228 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms