RNA–Protein interactions for RNA: ENST00000538235.2

CHFR-216, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 687 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-216ENST00000538235 KREMEN2Q8NCW0 462 aa14.02□□□□□ -0.17
CHFR-216ENST00000538235 FBXL13Q8NEE6 735 aa14.02□□□□□ -0.17
CHFR-216ENST00000538235 SYAP1Q96A49 352 aaPredicted RBP14.02□□□□□ -0.17
CHFR-216ENST00000538235 CBX8Q9HC52 389 aa14.02□□□□□ -0.17
CHFR-216ENST00000538235 RAB20Q9NX57 234 aa14.02□□□□□ -0.17
CHFR-216ENST00000538235 STK39Q9UEW8 545 aa14.02□□□□□ -0.17
CHFR-216ENST00000538235 HELZP42694 1942 aaKnown RBP14.02□□□□□ -0.17
CHFR-216ENST00000538235 PMM2O15305 246 aa14.01□□□□□ -0.17
CHFR-216ENST00000538235 MBTPS2O43462 519 aa14.01□□□□□ -0.17
CHFR-216ENST00000538235 HUS1O60921 280 aa14.01□□□□□ -0.17
CHFR-216ENST00000538235 TACC1O75410 805 aa14.01□□□□□ -0.17
CHFR-216ENST00000538235 AFPP02771 609 aaKnown RBP14.01□□□□□ -0.17
CHFR-216ENST00000538235 CPB1P15086 417 aa14.01□□□□□ -0.17
CHFR-216ENST00000538235 KLK7P49862 253 aa14.01□□□□□ -0.17
CHFR-216ENST00000538235 KCNMA1Q12791 1236 aa14.01□□□□□ -0.17
CHFR-216ENST00000538235 MYO1EQ12965 1108 aa14.01□□□□□ -0.17
CHFR-216ENST00000538235 SLC39A12Q504Y0 691 aa14.01□□□□□ -0.17
CHFR-216ENST00000538235 TCP11X2Q5H9J9 407 aa14.01□□□□□ -0.17
CHFR-216ENST00000538235 TMC5Q6UXY8 1006 aa14.01□□□□□ -0.17
CHFR-216ENST00000538235 SLC7A14Q8TBB6 771 aa14.01□□□□□ -0.17
CHFR-216ENST00000538235 SUSD6Q92537 303 aa14.01□□□□□ -0.17
CHFR-216ENST00000538235 HLA-CQ95604 372 aa14.01□□□□□ -0.17
CHFR-216ENST00000538235 KREMEN1Q96MU8 473 aa14.01□□□□□ -0.17
CHFR-216ENST00000538235 MMS19Q96T76 1030 aa14.01□□□□□ -0.17
CHFR-216ENST00000538235 SYT15Q9BQS2 421 aa14.01□□□□□ -0.17
CHFR-216ENST00000538235 CRACR2AQ9BSW2 395 aa14.01□□□□□ -0.17
CHFR-216ENST00000538235 ELOVL4Q9GZR5 314 aa14.01□□□□□ -0.17
CHFR-216ENST00000538235 NIF3L1Q9GZT8 377 aa14.01□□□□□ -0.17
CHFR-216ENST00000538235 HCFC1R1Q9NWW0 138 aa14.01□□□□□ -0.17
CHFR-216ENST00000538235 THEGQ9P2T0 379 aa14.01□□□□□ -0.17
CHFR-216ENST00000538235 DACH1Q9UI36 760 aa14.01□□□□□ -0.17
CHFR-216ENST00000538235 USP15Q9Y4E8 981 aaPredicted RBP14.01□□□□□ -0.17
CHFR-216ENST00000538235 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.01□□□□□ -0.17
CHFR-216ENST00000538235 NUP210Q8TEM1 1887 aaPredicted RBP14.01□□□□□ -0.17
CHFR-216ENST00000538235 KIF26AQ9ULI4 1882 aaPredicted RBP14.01□□□□□ -0.17
CHFR-216ENST00000538235 OR6C75A6NL08 312 aa14□□□□□ -0.17
CHFR-216ENST00000538235 H7C4K7 107 aa14□□□□□ -0.17
CHFR-216ENST00000538235 ZMYND10O75800 440 aa14□□□□□ -0.17
CHFR-216ENST00000538235 GNA14O95837 355 aa14□□□□□ -0.17
CHFR-216ENST00000538235 C8AP07357 584 aa14□□□□□ -0.17
CHFR-216ENST00000538235 PDGFRBP09619 1106 aa14□□□□□ -0.17
CHFR-216ENST00000538235 CCDC192P0DO97 292 aa14□□□□□ -0.17
CHFR-216ENST00000538235 ATF6P18850 670 aa14□□□□□ -0.17
CHFR-216ENST00000538235 SLC9A1P19634 815 aa14□□□□□ -0.17
CHFR-216ENST00000538235 ACO1P21399 889 aaKnown RBP14□□□□□ -0.17
CHFR-216ENST00000538235 TNNC1P63316 161 aa14□□□□□ -0.17
CHFR-216ENST00000538235 NTHL1P78549 312 aa14□□□□□ -0.17
CHFR-216ENST00000538235 ADCY1Q08828 1119 aa14□□□□□ -0.17
CHFR-216ENST00000538235 INCA1Q0VD86 236 aa14□□□□□ -0.17
CHFR-216ENST00000538235 GPR17Q13304 367 aa14□□□□□ -0.17
CHFR-216ENST00000538235 MAN2A1Q16706 1144 aa14□□□□□ -0.17
CHFR-216ENST00000538235 SGSM1Q2NKQ1 1148 aa14□□□□□ -0.17
CHFR-216ENST00000538235 LEXMQ3ZCV2 418 aa14□□□□□ -0.17
CHFR-216ENST00000538235 CT47A1Q5JQC4 288 aaPredicted RBP14□□□□□ -0.17
CHFR-216ENST00000538235 PHLDB3Q6NSJ2 640 aa14□□□□□ -0.17
CHFR-216ENST00000538235 FAM171BQ6P995 826 aa14□□□□□ -0.17
CHFR-216ENST00000538235 PAQR9Q6ZVX9 377 aa14□□□□□ -0.17
CHFR-216ENST00000538235 USP37Q86T82 979 aa14□□□□□ -0.17
CHFR-216ENST00000538235 LUZP1Q86V48 1076 aa14□□□□□ -0.17
CHFR-216ENST00000538235 TMEM86AQ8N2M4 240 aa14□□□□□ -0.17
CHFR-216ENST00000538235 ZNF461Q8TAF7 563 aa14□□□□□ -0.17
CHFR-216ENST00000538235 CASP10Q92851 521 aa14□□□□□ -0.17
CHFR-216ENST00000538235 MYLPFQ96A32 169 aa14□□□□□ -0.17
CHFR-216ENST00000538235 BPIFA3Q9BQP9 254 aa14□□□□□ -0.17
CHFR-216ENST00000538235 TUBGCP2Q9BSJ2 902 aa14□□□□□ -0.17
CHFR-216ENST00000538235 INTS2Q9H0H0 1204 aaKnown RBP14□□□□□ -0.17
CHFR-216ENST00000538235 CD207Q9UJ71 328 aa14□□□□□ -0.17
CHFR-216ENST00000538235 GTF3C4Q9UKN8 822 aa14□□□□□ -0.17
CHFR-216ENST00000538235 SSX2IPQ9Y2D8 614 aa14□□□□□ -0.17
CHFR-216ENST00000538235 SLC27A5Q9Y2P5 690 aa14□□□□□ -0.17
CHFR-216ENST00000538235 YIPF1Q9Y548 306 aa14□□□□□ -0.17
CHFR-216ENST00000538235 INSL5Q9Y5Q6 135 aa14□□□□□ -0.17
CHFR-216ENST00000538235 CLDN5O00501 218 aa13.99□□□□□ -0.17
CHFR-216ENST00000538235 EPHB6O15197 1021 aa13.99□□□□□ -0.17
CHFR-216ENST00000538235 CCL16O15467 120 aa13.99□□□□□ -0.17
CHFR-216ENST00000538235 N4BP1O75113 896 aaKnown RBP13.99□□□□□ -0.17
CHFR-216ENST00000538235 ATF2P15336 505 aa13.99□□□□□ -0.17
CHFR-216ENST00000538235 CD58P19256 250 aa13.99□□□□□ -0.17
CHFR-216ENST00000538235 PTMSP20962 102 aa13.99□□□□□ -0.17
CHFR-216ENST00000538235 PAX3P23760 479 aa13.99□□□□□ -0.17
CHFR-216ENST00000538235 MTIF2P46199 727 aaKnown RBP13.99□□□□□ -0.17
CHFR-216ENST00000538235 NDST1P52848 882 aa13.99□□□□□ -0.17
CHFR-216ENST00000538235 CREMQ03060 361 aa13.99□□□□□ -0.17
CHFR-216ENST00000538235 DUSP4Q13115 394 aa13.99□□□□□ -0.17
CHFR-216ENST00000538235 SDHAF4Q5VUM1 108 aa13.99□□□□□ -0.17
CHFR-216ENST00000538235 PDXDC1Q6P996 788 aa13.99□□□□□ -0.17
CHFR-216ENST00000538235 DPH6Q7L8W6 267 aa13.99□□□□□ -0.17
CHFR-216ENST00000538235 CREBRFQ8IUR6 639 aa13.99□□□□□ -0.17
CHFR-216ENST00000538235 TAF4BQ92750 862 aa13.99□□□□□ -0.17
CHFR-216ENST00000538235 PPP2R3CQ969Q6 453 aa13.99□□□□□ -0.17
CHFR-216ENST00000538235 NECAB3Q96P71 396 aaPredicted RBP13.99□□□□□ -0.17
CHFR-216ENST00000538235 ZSWIM1Q9BR11 485 aa13.99□□□□□ -0.17
CHFR-216ENST00000538235 POMKQ9H5K3 350 aa13.99□□□□□ -0.17
CHFR-216ENST00000538235 GCNT4Q9P109 453 aa13.99□□□□□ -0.17
CHFR-216ENST00000538235 CEP72Q9P209 647 aa13.99□□□□□ -0.17
CHFR-216ENST00000538235 AFF4Q9UHB7 1163 aaKnown RBP13.99□□□□□ -0.17
CHFR-216ENST00000538235 DSEQ9UL01 958 aa13.99□□□□□ -0.17
CHFR-216ENST00000538235 COL4A2P08572 1712 aa13.98□□□□□ -0.17
CHFR-216ENST00000538235 ARHGEF37A1IGU5 675 aa13.98□□□□□ -0.17
CHFR-216ENST00000538235 RNF225M0QZC1 329 aaPredicted RBP13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms