RNA–Protein interactions for RNA: ENST00000538224.1

USP28-206, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-206ENST00000538224 C1orf127Q8N9H9 656 aa7.01□□□□□ -1.29
USP28-206ENST00000538224 AFG1LQ8WV93 481 aa7.01□□□□□ -1.29
USP28-206ENST00000538224 TRAPPC12Q8WVT3 735 aa7.01□□□□□ -1.29
USP28-206ENST00000538224 C1orf54Q8WWF1 131 aa7.01□□□□□ -1.29
USP28-206ENST00000538224 NLRP7Q8WX94 980 aa7.01□□□□□ -1.29
USP28-206ENST00000538224 COPS5Q92905 334 aa7.01□□□□□ -1.29
USP28-206ENST00000538224 CENPTQ96BT3 561 aa7.01□□□□□ -1.29
USP28-206ENST00000538224 TTC25Q96NG3 672 aa7.01□□□□□ -1.29
USP28-206ENST00000538224 ACAP3Q96P50 834 aa7.01□□□□□ -1.29
USP28-206ENST00000538224 MCEEQ96PE7 176 aa7.01□□□□□ -1.29
USP28-206ENST00000538224 CCDC77Q9BR77 488 aa7.01□□□□□ -1.29
USP28-206ENST00000538224 SYT17Q9BSW7 474 aa7.01□□□□□ -1.29
USP28-206ENST00000538224 TUT1Q9H6E5 874 aaKnown RBP7.01□□□□□ -1.29
USP28-206ENST00000538224 SYNCQ9H7C4 482 aa7.01□□□□□ -1.29
USP28-206ENST00000538224 EFCC1Q9HA90 598 aa7.01□□□□□ -1.29
USP28-206ENST00000538224 PPCSQ9HAB8 311 aa7.01□□□□□ -1.29
USP28-206ENST00000538224 IFT122Q9HBG6 1241 aa7.01□□□□□ -1.29
USP28-206ENST00000538224 TMEM51Q9NW97 253 aa7.01□□□□□ -1.29
USP28-206ENST00000538224 CHORDC1Q9UHD1 332 aaPredicted RBP7.01□□□□□ -1.29
USP28-206ENST00000538224 ANAPC5Q9UJX4 755 aa7.01□□□□□ -1.29
USP28-206ENST00000538224 GGA2Q9UJY4 613 aa7.01□□□□□ -1.29
USP28-206ENST00000538224 USTQ9Y2C2 406 aa7.01□□□□□ -1.29
USP28-206ENST00000538224 A0A087WZ62 844 aa7□□□□□ -1.29
USP28-206ENST00000538224 TCRBV7S2A1N4TA0A589 114 aa7□□□□□ -1.29
USP28-206ENST00000538224 SIGLEC16A6NMB1 481 aa7□□□□□ -1.29
USP28-206ENST00000538224 LACTBL1A8MY62 500 aa7□□□□□ -1.29
USP28-206ENST00000538224 BTBD19C9JJ37 291 aa7□□□□□ -1.29
USP28-206ENST00000538224 B4GALT5O43286 388 aa7□□□□□ -1.29
USP28-206ENST00000538224 XPOTO43592 962 aaKnown RBP7□□□□□ -1.29
USP28-206ENST00000538224 LIASO43766 372 aa7□□□□□ -1.29
USP28-206ENST00000538224 CILPO75339 1184 aa7□□□□□ -1.29
USP28-206ENST00000538224 RNF8O76064 485 aa7□□□□□ -1.29
USP28-206ENST00000538224 KIAA0754O94854 1291 aa7□□□□□ -1.29
USP28-206ENST00000538224 ITGB3P05106 788 aa7□□□□□ -1.29
USP28-206ENST00000538224 MMP3P08254 477 aa7□□□□□ -1.29
USP28-206ENST00000538224 NFICP08651 508 aa7□□□□□ -1.29
USP28-206ENST00000538224 ABHD2P08910 425 aa7□□□□□ -1.29
USP28-206ENST00000538224 KRT3P12035 628 aa7□□□□□ -1.29
USP28-206ENST00000538224 YBX3P16989 372 aaKnown RBP eCLIP7□□□□□ -1.29
USP28-206ENST00000538224 ATF7P17544 494 aaPredicted RBP7□□□□□ -1.29
USP28-206ENST00000538224 PSMA2P25787 234 aa7□□□□□ -1.29
USP28-206ENST00000538224 AXLP30530 894 aa7□□□□□ -1.29
USP28-206ENST00000538224 GJA5P36382 358 aa7□□□□□ -1.29
USP28-206ENST00000538224 ADCY8P40145 1251 aa7□□□□□ -1.29
USP28-206ENST00000538224 GABRB2P47870 512 aa7□□□□□ -1.29
USP28-206ENST00000538224 ATP1A2P50993 1020 aa7□□□□□ -1.29
USP28-206ENST00000538224 YARSP54577 528 aaKnown RBP7□□□□□ -1.29
USP28-206ENST00000538224 TAS2R40P59535 323 aa7□□□□□ -1.29
USP28-206ENST00000538224 MAGOHP61326 146 aaKnown RBP7□□□□□ -1.29
USP28-206ENST00000538224 OSTNP61366 133 aa7□□□□□ -1.29
USP28-206ENST00000538224 PSMC1P62191 440 aaKnown RBP7□□□□□ -1.29
USP28-206ENST00000538224 IGBP1P78318 339 aa7□□□□□ -1.29
USP28-206ENST00000538224 SLC20A2Q08357 652 aa7□□□□□ -1.29
USP28-206ENST00000538224 GRIK4Q16099 956 aa7□□□□□ -1.29
USP28-206ENST00000538224 CNGA2Q16280 664 aa7□□□□□ -1.29
USP28-206ENST00000538224 WDR72Q3MJ13 1102 aa7□□□□□ -1.29
USP28-206ENST00000538224 JADE1Q6IE81 842 aa7□□□□□ -1.29
USP28-206ENST00000538224 RHBDF2Q6PJF5 856 aa7□□□□□ -1.29
USP28-206ENST00000538224 DLK2Q6UY11 383 aa7□□□□□ -1.29
USP28-206ENST00000538224 SPOCD1Q6ZMY3 1216 aa7□□□□□ -1.29
USP28-206ENST00000538224 GSTA5Q7RTV2 222 aa7□□□□□ -1.29
USP28-206ENST00000538224 PCGF5Q86SE9 256 aa7□□□□□ -1.29
USP28-206ENST00000538224 ZDHHC14Q8IZN3 488 aa7□□□□□ -1.29
USP28-206ENST00000538224 OR6J1Q8NGC5 347 aa7□□□□□ -1.29
USP28-206ENST00000538224 OR2W6PQ8NHA6 318 aa7□□□□□ -1.29
USP28-206ENST00000538224 NKD2Q969F2 451 aaPredicted RBP7□□□□□ -1.29
USP28-206ENST00000538224 ELMO3Q96BJ8 720 aa7□□□□□ -1.29
USP28-206ENST00000538224 TMEM176AQ96HP8 235 aa7□□□□□ -1.29
USP28-206ENST00000538224 FAM84AQ96KN4 292 aa7□□□□□ -1.29
USP28-206ENST00000538224 SERPINB12Q96P63 405 aa7□□□□□ -1.29
USP28-206ENST00000538224 SLITRK1Q96PX8 696 aa7□□□□□ -1.29
USP28-206ENST00000538224 FDXACB1Q9BRP7 624 aaPredicted RBP7□□□□□ -1.29
USP28-206ENST00000538224 C16orf70Q9BSU1 422 aa7□□□□□ -1.29
USP28-206ENST00000538224 GCOM2Q9BZD3 368 aaPredicted RBP7□□□□□ -1.29
USP28-206ENST00000538224 TRIM7Q9C029 511 aa7□□□□□ -1.29
USP28-206ENST00000538224 KATNBL1Q9H079 304 aa7□□□□□ -1.29
USP28-206ENST00000538224 RNPEPQ9H4A4 650 aa7□□□□□ -1.29
USP28-206ENST00000538224 PDGFCQ9NRA1 345 aa7□□□□□ -1.29
USP28-206ENST00000538224 CHST7Q9NS84 486 aa7□□□□□ -1.29
USP28-206ENST00000538224 NXF1Q9UBU9 619 aaKnown RBP7□□□□□ -1.29
USP28-206ENST00000538224 RSPH14Q9UHP6 348 aa7□□□□□ -1.29
USP28-206ENST00000538224 SLC12A6Q9UHW9 1150 aa7□□□□□ -1.29
USP28-206ENST00000538224 SIX4Q9UIU6 781 aa7□□□□□ -1.29
USP28-206ENST00000538224 BARX2Q9UMQ3 279 aaPredicted RBP7□□□□□ -1.29
USP28-206ENST00000538224 NOVA2Q9UNW9 492 aaKnown RBP7□□□□□ -1.29
USP28-206ENST00000538224 SHOC2Q9UQ13 582 aa7□□□□□ -1.29
USP28-206ENST00000538224 DRG1Q9Y295 367 aaKnown RBP7□□□□□ -1.29
USP28-206ENST00000538224 RRP15Q9Y3B9 282 aaKnown RBP7□□□□□ -1.29
USP28-206ENST00000538224 GTF3C5Q9Y5Q8 519 aaPredicted RBP7□□□□□ -1.29
USP28-206ENST00000538224 TRIP11Q15643 1979 aa7□□□□□ -1.29
USP28-206ENST00000538224 hCG_1818297A0A087WSY0 165 aa6.99□□□□□ -1.29
USP28-206ENST00000538224 A0A1B0GUA9 196 aa6.99□□□□□ -1.29
USP28-206ENST00000538224 FAM170AA1A519 330 aa6.99□□□□□ -1.29
USP28-206ENST00000538224 GPR25O00155 361 aa6.99□□□□□ -1.29
USP28-206ENST00000538224 DNALI1O14645 258 aaPredicted RBP6.99□□□□□ -1.29
USP28-206ENST00000538224 RASGRF2O14827 1237 aa6.99□□□□□ -1.29
USP28-206ENST00000538224 TSPAN1O60635 241 aa6.99□□□□□ -1.29
USP28-206ENST00000538224 TCEA3O75764 348 aa6.99□□□□□ -1.29
USP28-206ENST00000538224 FAM107AO95990 144 aa6.99□□□□□ -1.29
USP28-206ENST00000538224 CALCAP01258 141 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms