RNA–Protein interactions for RNA: ENST00000537981.5

RTN3-208, Transcript of reticulon 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN3, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-208ENST00000537981 CCT7Q99832 543 aa11.23□□□□□ -0.61
RTN3-208ENST00000537981 GBA3Q9H227 469 aa11.23□□□□□ -0.61
RTN3-208ENST00000537981 S100A14Q9HCY8 104 aa11.23□□□□□ -0.61
RTN3-208ENST00000537981 ANKFY1Q9P2R3 1169 aa11.23□□□□□ -0.61
RTN3-208ENST00000537981 VPS51Q9UID3 782 aa11.23□□□□□ -0.61
RTN3-208ENST00000537981 DMTF1Q9Y222 760 aa11.23□□□□□ -0.61
RTN3-208ENST00000537981 AFG3L2Q9Y4W6 797 aa11.23□□□□□ -0.61
RTN3-208ENST00000537981 FADS3Q9Y5Q0 445 aa11.23□□□□□ -0.61
RTN3-208ENST00000537981 NCANO14594 1321 aa11.22□□□□□ -0.61
RTN3-208ENST00000537981 COL22A1Q8NFW1 1626 aaPredicted RBP11.22□□□□□ -0.61
RTN3-208ENST00000537981 CASZ1Q86V15 1759 aa11.22□□□□□ -0.61
RTN3-208ENST00000537981 TYROBPO43914 113 aa11.22□□□□□ -0.61
RTN3-208ENST00000537981 MYL2P10916 166 aa11.22□□□□□ -0.61
RTN3-208ENST00000537981 COMTP21964 271 aa11.22□□□□□ -0.61
RTN3-208ENST00000537981 EIF2B2P49770 351 aaKnown RBP11.22□□□□□ -0.61
RTN3-208ENST00000537981 NCKAP1LP55160 1127 aa11.22□□□□□ -0.61
RTN3-208ENST00000537981 MESDQ14696 234 aa11.22□□□□□ -0.61
RTN3-208ENST00000537981 RASA2Q15283 850 aa11.22□□□□□ -0.61
RTN3-208ENST00000537981 GRAMD1BQ3KR37 738 aa11.22□□□□□ -0.61
RTN3-208ENST00000537981 RALGPS1Q5JS13 557 aa11.22□□□□□ -0.61
RTN3-208ENST00000537981 ZNF772Q68DY9 489 aaPredicted RBP11.22□□□□□ -0.61
RTN3-208ENST00000537981 ITPRIPL1Q6GPH6 555 aa11.22□□□□□ -0.61
RTN3-208ENST00000537981 LDHAL6AQ6ZMR3 332 aa11.22□□□□□ -0.61
RTN3-208ENST00000537981 RNF207Q6ZRF8 634 aa11.22□□□□□ -0.61
RTN3-208ENST00000537981 VASH1Q7L8A9 365 aaPredicted RBP11.22□□□□□ -0.61
RTN3-208ENST00000537981 NET1Q7Z628 596 aaPredicted RBP11.22□□□□□ -0.61
RTN3-208ENST00000537981 OGFOD1Q8N543 542 aa11.22□□□□□ -0.61
RTN3-208ENST00000537981 NDEL1Q9GZM8 345 aa11.22□□□□□ -0.61
RTN3-208ENST00000537981 GREM2Q9H772 168 aa11.22□□□□□ -0.61
RTN3-208ENST00000537981 SIAEQ9HAT2 523 aa11.22□□□□□ -0.61
RTN3-208ENST00000537981 SACM1LQ9NTJ5 587 aa11.22□□□□□ -0.61
RTN3-208ENST00000537981 UTP6Q9NYH9 597 aaKnown RBP11.22□□□□□ -0.61
RTN3-208ENST00000537981 PACSIN3Q9UKS6 424 aa11.22□□□□□ -0.61
RTN3-208ENST00000537981 MAD1L1Q9Y6D9 718 aa11.22□□□□□ -0.61
RTN3-208ENST00000537981 DUOX1Q9NRD9 1551 aa11.22□□□□□ -0.61
RTN3-208ENST00000537981 LAMB2P55268 1798 aa11.22□□□□□ -0.61
RTN3-208ENST00000537981 EXOC1LA0A1B0GW35 172 aa11.22□□□□□ -0.61
RTN3-208ENST00000537981 SNRPA1P09661 255 aaKnown RBP11.22□□□□□ -0.61
RTN3-208ENST00000537981 CD53P19397 219 aa11.22□□□□□ -0.61
RTN3-208ENST00000537981 CASP4P49662 377 aa11.22□□□□□ -0.61
RTN3-208ENST00000537981 RCAN1P53805 252 aa11.22□□□□□ -0.61
RTN3-208ENST00000537981 NPEPPSP55786 919 aa11.22□□□□□ -0.61
RTN3-208ENST00000537981 SH3BGRP55822 239 aaPredicted RBP11.22□□□□□ -0.61
RTN3-208ENST00000537981 SLC25A3Q00325 362 aa11.22□□□□□ -0.61
RTN3-208ENST00000537981 CDK16Q00536 496 aa11.22□□□□□ -0.61
RTN3-208ENST00000537981 PEX6Q13608 980 aa11.22□□□□□ -0.61
RTN3-208ENST00000537981 CCNIQ14094 377 aa11.22□□□□□ -0.61
RTN3-208ENST00000537981 PSMD6Q15008 389 aa11.22□□□□□ -0.61
RTN3-208ENST00000537981 FYB2Q5VWT5 728 aa11.22□□□□□ -0.61
RTN3-208ENST00000537981 NEPROQ6NW34 567 aa11.22□□□□□ -0.61
RTN3-208ENST00000537981 CYFIP1Q7L576 1253 aa11.22□□□□□ -0.61
RTN3-208ENST00000537981 HEATR3Q7Z4Q2 680 aa11.22□□□□□ -0.61
RTN3-208ENST00000537981 SFR1Q86XK3 245 aa11.22□□□□□ -0.61
RTN3-208ENST00000537981 KCNH5Q8NCM2 988 aa11.22□□□□□ -0.61
RTN3-208ENST00000537981 LSM14AQ8ND56 463 aaKnown RBP11.22□□□□□ -0.61
RTN3-208ENST00000537981 PLEKHO2Q8TD55 490 aa11.22□□□□□ -0.61
RTN3-208ENST00000537981 SLC20A1Q8WUM9 679 aa11.22□□□□□ -0.61
RTN3-208ENST00000537981 DNAJC19Q96DA6 116 aa11.22□□□□□ -0.61
RTN3-208ENST00000537981 ZSWIM1Q9BR11 485 aa11.22□□□□□ -0.61
RTN3-208ENST00000537981 DCUN1D5Q9BTE7 237 aa11.22□□□□□ -0.61
RTN3-208ENST00000537981 OSBPL10Q9BXB5 764 aa11.22□□□□□ -0.61
RTN3-208ENST00000537981 OSBPL8Q9BZF1 889 aa11.22□□□□□ -0.61
RTN3-208ENST00000537981 SHCBP1LQ9BZQ2 653 aa11.22□□□□□ -0.61
RTN3-208ENST00000537981 CHST12Q9NRB3 414 aa11.22□□□□□ -0.61
RTN3-208ENST00000537981 TMOD2Q9NZR1 351 aa11.22□□□□□ -0.61
RTN3-208ENST00000537981 F8W8V4 182 aa11.21□□□□□ -0.61
RTN3-208ENST00000537981 WDR46O15213 610 aaKnown RBP11.21□□□□□ -0.61
RTN3-208ENST00000537981 TM7SF2O76062 418 aa11.21□□□□□ -0.61
RTN3-208ENST00000537981 DLDP09622 509 aaKnown RBP11.21□□□□□ -0.61
RTN3-208ENST00000537981 KRT4P19013 534 aa11.21□□□□□ -0.61
RTN3-208ENST00000537981 RPL10P27635 214 aaKnown RBP11.21□□□□□ -0.61
RTN3-208ENST00000537981 HOXA10P31260 410 aaPredicted RBP11.21□□□□□ -0.61
RTN3-208ENST00000537981 HOXD13P35453 343 aa11.21□□□□□ -0.61
RTN3-208ENST00000537981 SLC5A3P53794 718 aa11.21□□□□□ -0.61
RTN3-208ENST00000537981 PSMC1P62191 440 aaKnown RBP11.21□□□□□ -0.61
RTN3-208ENST00000537981 ZNF200P98182 395 aaPredicted RBP11.21□□□□□ -0.61
RTN3-208ENST00000537981 CTBSQ01459 385 aa11.21□□□□□ -0.61
RTN3-208ENST00000537981 SNAPC2Q13487 334 aa11.21□□□□□ -0.61
RTN3-208ENST00000537981 FAM209AQ5JX71 171 aa11.21□□□□□ -0.61
RTN3-208ENST00000537981 CCDC62Q6P9F0 684 aa11.21□□□□□ -0.61
RTN3-208ENST00000537981 SLC13A5Q86YT5 568 aaPredicted RBP11.21□□□□□ -0.61
RTN3-208ENST00000537981 GALNT4Q8N4A0 578 aa11.21□□□□□ -0.61
RTN3-208ENST00000537981 LZTR1Q8N653 840 aa11.21□□□□□ -0.61
RTN3-208ENST00000537981 TMCO5AQ8N6Q1 288 aa11.21□□□□□ -0.61
RTN3-208ENST00000537981 VGLL2Q8N8G2 317 aa11.21□□□□□ -0.61
RTN3-208ENST00000537981 SPATA5Q8NB90 893 aa11.21□□□□□ -0.61
RTN3-208ENST00000537981 SCFD1Q8WVM8 642 aa11.21□□□□□ -0.61
RTN3-208ENST00000537981 CEP295NLQ96MC4 621 aa11.21□□□□□ -0.61
RTN3-208ENST00000537981 TCHPQ9BT92 498 aa11.21□□□□□ -0.61
RTN3-208ENST00000537981 BRINP2Q9C0B6 783 aa11.21□□□□□ -0.61
RTN3-208ENST00000537981 TRPV5Q9NQA5 729 aa11.21□□□□□ -0.61
RTN3-208ENST00000537981 INPP5FQ9Y2H2 1132 aa11.21□□□□□ -0.61
RTN3-208ENST00000537981 SYNGAP1Q96PV0 1343 aa11.21□□□□□ -0.61
RTN3-208ENST00000537981 NUP188Q5SRE5 1749 aa11.21□□□□□ -0.62
RTN3-208ENST00000537981 A0A088AWK7 358 aa11.2□□□□□ -0.62
RTN3-208ENST00000537981 PRPF4O43172 522 aaKnown RBP eCLIP11.2□□□□□ -0.623e-8■□□□□ 10.6
RTN3-208ENST00000537981 DNAJA2O60884 412 aa11.2□□□□□ -0.62
RTN3-208ENST00000537981 LRRN2O75325 713 aa11.2□□□□□ -0.62
RTN3-208ENST00000537981 TRPA1O75762 1119 aa11.2□□□□□ -0.62
RTN3-208ENST00000537981 CD48P09326 243 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms