RNA–Protein interactions for RNA: ENST00000537641.5

CPSF7-218, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-218ENST00000537641 KRT76Q01546 638 aa12.8□□□□□ -0.36
CPSF7-218ENST00000537641 GPS1Q13098 491 aa12.8□□□□□ -0.36
CPSF7-218ENST00000537641 PSMD6Q15008 389 aa12.8□□□□□ -0.36
CPSF7-218ENST00000537641 UGCGQ16739 394 aa12.8□□□□□ -0.36
CPSF7-218ENST00000537641 KLHL38Q2WGJ6 581 aa12.8□□□□□ -0.36
CPSF7-218ENST00000537641 IRGCQ6NXR0 463 aa12.8□□□□□ -0.36
CPSF7-218ENST00000537641 CEP120Q8N960 986 aa12.8□□□□□ -0.36
CPSF7-218ENST00000537641 IL31RAQ8NI17 732 aa12.8□□□□□ -0.36
CPSF7-218ENST00000537641 SENP7Q9BQF6 1050 aa12.8□□□□□ -0.36
CPSF7-218ENST00000537641 FHDC1Q9C0D6 1143 aaPredicted RBP12.8□□□□□ -0.36
CPSF7-218ENST00000537641 DENND2DQ9H6A0 471 aaPredicted RBP12.8□□□□□ -0.36
CPSF7-218ENST00000537641 PARVAQ9NVD7 372 aa12.8□□□□□ -0.36
CPSF7-218ENST00000537641 TCEAL9Q9UHQ7 104 aa12.8□□□□□ -0.36
CPSF7-218ENST00000537641 DNPEPQ9ULA0 475 aa12.8□□□□□ -0.36
CPSF7-218ENST00000537641 USTQ9Y2C2 406 aa12.8□□□□□ -0.36
CPSF7-218ENST00000537641 COL11A1P12107 1806 aaPredicted RBP12.8□□□□□ -0.36
CPSF7-218ENST00000537641 CCDC22O60826 627 aa12.79□□□□□ -0.36
CPSF7-218ENST00000537641 DNAJC6O75061 913 aa12.79□□□□□ -0.36
CPSF7-218ENST00000537641 CBX6O95503 412 aa12.79□□□□□ -0.36
CPSF7-218ENST00000537641 NEFHP12036 1026 aa12.79□□□□□ -0.36
CPSF7-218ENST00000537641 ACO1P21399 889 aaKnown RBP12.79□□□□□ -0.36
CPSF7-218ENST00000537641 CDC25CP30307 473 aa12.79□□□□□ -0.36
CPSF7-218ENST00000537641 DSG3P32926 999 aa12.79□□□□□ -0.36
CPSF7-218ENST00000537641 VHLP40337 213 aa12.79□□□□□ -0.36
CPSF7-218ENST00000537641 PTDSS1P48651 473 aaKnown RBP12.79□□□□□ -0.36
CPSF7-218ENST00000537641 RTP1P59025 263 aa12.79□□□□□ -0.36
CPSF7-218ENST00000537641 KLC1Q07866 573 aa12.79□□□□□ -0.36
CPSF7-218ENST00000537641 MTMR1Q13613 665 aa12.79□□□□□ -0.36
CPSF7-218ENST00000537641 OASLQ15646 514 aaKnown RBP12.79□□□□□ -0.36
CPSF7-218ENST00000537641 CTC1Q2NKJ3 1217 aa12.79□□□□□ -0.36
CPSF7-218ENST00000537641 ZACNQ401N2 412 aa12.79□□□□□ -0.36
CPSF7-218ENST00000537641 LLGL2Q6P1M3 1020 aa12.79□□□□□ -0.36
CPSF7-218ENST00000537641 SPOCD1Q6ZMY3 1216 aa12.79□□□□□ -0.36
CPSF7-218ENST00000537641 C4orf50Q6ZRC1 276 aa12.79□□□□□ -0.36
CPSF7-218ENST00000537641 CLNKQ7Z7G1 428 aa12.79□□□□□ -0.36
CPSF7-218ENST00000537641 ZBED8Q8IZ13 594 aa12.79□□□□□ -0.36
CPSF7-218ENST00000537641 ATP11CQ8NB49 1132 aa12.79□□□□□ -0.36
CPSF7-218ENST00000537641 SYTL5Q8TDW5 730 aaPredicted RBP12.79□□□□□ -0.36
CPSF7-218ENST00000537641 SH3GL3Q99963 347 aa12.79□□□□□ -0.36
CPSF7-218ENST00000537641 FAM118BQ9BPY3 351 aa12.79□□□□□ -0.36
CPSF7-218ENST00000537641 PI4K2AQ9BTU6 479 aa12.79□□□□□ -0.36
CPSF7-218ENST00000537641 DHRS4Q9BTZ2 278 aa12.79□□□□□ -0.36
CPSF7-218ENST00000537641 MAK16Q9BXY0 300 aaKnown RBP12.79□□□□□ -0.36
CPSF7-218ENST00000537641 FRMD8P1Q9BZ68 369 aaPredicted RBP12.79□□□□□ -0.36
CPSF7-218ENST00000537641 DDX56Q9NY93 547 aaKnown RBP12.79□□□□□ -0.36
CPSF7-218ENST00000537641 SMAPO00193 183 aa12.79□□□□□ -0.36
CPSF7-218ENST00000537641 NVLO15381 856 aaKnown RBP12.79□□□□□ -0.36
CPSF7-218ENST00000537641 EXTL3O43909 919 aa12.79□□□□□ -0.36
CPSF7-218ENST00000537641 HAUS5O94927 633 aa12.79□□□□□ -0.36
CPSF7-218ENST00000537641 CALCAP01258 141 aa12.79□□□□□ -0.36
CPSF7-218ENST00000537641 IL1BP01584 269 aa12.79□□□□□ -0.36
CPSF7-218ENST00000537641 HLA-DRAP01903 254 aa12.79□□□□□ -0.36
CPSF7-218ENST00000537641 GNA15P30679 374 aa12.79□□□□□ -0.36
CPSF7-218ENST00000537641 GJC1P36383 396 aa12.79□□□□□ -0.36
CPSF7-218ENST00000537641 PIK3CAP42336 1068 aa12.79□□□□□ -0.36
CPSF7-218ENST00000537641 SSR1P43307 286 aaKnown RBP12.79□□□□□ -0.36
CPSF7-218ENST00000537641 CTCFP49711 727 aaPredicted RBP12.79□□□□□ -0.36
CPSF7-218ENST00000537641 PDIA2Q13087 525 aaKnown RBP12.79□□□□□ -0.36
CPSF7-218ENST00000537641 CUL2Q13617 745 aa12.79□□□□□ -0.36
CPSF7-218ENST00000537641 FASTKD3Q14CZ7 662 aaKnown RBP12.79□□□□□ -0.36
CPSF7-218ENST00000537641 SEPT7Q16181 437 aaKnown RBP12.79□□□□□ -0.36
CPSF7-218ENST00000537641 BRDTQ58F21 947 aaPredicted RBP12.79□□□□□ -0.36
CPSF7-218ENST00000537641 DAB2IPQ5VWQ8 1189 aa12.79□□□□□ -0.36
CPSF7-218ENST00000537641 FAM91A1Q658Y4 838 aa12.79□□□□□ -0.36
CPSF7-218ENST00000537641 PLA2G4FQ68DD2 849 aa12.79□□□□□ -0.36
CPSF7-218ENST00000537641 TRIM68Q6AZZ1 485 aa12.79□□□□□ -0.36
CPSF7-218ENST00000537641 ADGRD1Q6QNK2 874 aa12.79□□□□□ -0.36
CPSF7-218ENST00000537641 EP400NLQ6ZTU2 488 aa12.79□□□□□ -0.36
CPSF7-218ENST00000537641 DEFB132Q7Z7B7 95 aa12.79□□□□□ -0.36
CPSF7-218ENST00000537641 PHLDB2Q86SQ0 1253 aa12.79□□□□□ -0.36
CPSF7-218ENST00000537641 CPXCR1Q8N123 301 aa12.79□□□□□ -0.36
CPSF7-218ENST00000537641 GLIS1Q8NBF1 620 aa12.79□□□□□ -0.36
CPSF7-218ENST00000537641 TTC8Q8TAM2 541 aa12.79□□□□□ -0.36
CPSF7-218ENST00000537641 ZNF333Q96JL9 665 aa12.79□□□□□ -0.36
CPSF7-218ENST00000537641 VPS11Q9H270 941 aa12.79□□□□□ -0.36
CPSF7-218ENST00000537641 MMADHCQ9H3L0 296 aaPredicted RBP12.79□□□□□ -0.36
CPSF7-218ENST00000537641 RAVER2Q9HCJ3 691 aaKnown RBP12.79□□□□□ -0.36
CPSF7-218ENST00000537641 ZMYND8Q9ULU4 1186 aaPredicted RBP12.79□□□□□ -0.36
CPSF7-218ENST00000537641 CNTN6Q9UQ52 1028 aa12.79□□□□□ -0.36
CPSF7-218ENST00000537641 FARP1Q9Y4F1 1045 aaPredicted RBP12.79□□□□□ -0.36
CPSF7-218ENST00000537641 RLFQ13129 1914 aa12.78□□□□□ -0.36
CPSF7-218ENST00000537641 GOLGB1Q14789 3259 aaKnown RBP12.78□□□□□ -0.36
CPSF7-218ENST00000537641 PHIPQ8WWQ0 1821 aa12.78□□□□□ -0.36
CPSF7-218ENST00000537641 hCG_1818297A0A087WSY0 165 aa12.78□□□□□ -0.36
CPSF7-218ENST00000537641 A0A1W2PPM1 405 aa12.78□□□□□ -0.36
CPSF7-218ENST00000537641 DKC1O60832 514 aaKnown RBP eCLIP12.78□□□□□ -0.36
CPSF7-218ENST00000537641 TGDSO95455 350 aa12.78□□□□□ -0.36
CPSF7-218ENST00000537641 C4BPAP04003 597 aaKnown RBP12.78□□□□□ -0.36
CPSF7-218ENST00000537641 CALB1P05937 261 aa12.78□□□□□ -0.36
CPSF7-218ENST00000537641 TBXAS1P24557 533 aaPredicted RBP12.78□□□□□ -0.36
CPSF7-218ENST00000537641 ARL4CP56559 192 aa12.78□□□□□ -0.36
CPSF7-218ENST00000537641 MRPS9P82933 396 aaKnown RBP12.78□□□□□ -0.36
CPSF7-218ENST00000537641 TAP1Q03518 808 aa12.78□□□□□ -0.36
CPSF7-218ENST00000537641 KRT72Q14CN4 511 aa12.78□□□□□ -0.36
CPSF7-218ENST00000537641 MAPK6Q16659 721 aa12.78□□□□□ -0.36
CPSF7-218ENST00000537641 MUM1Q2TAK8 710 aa12.78□□□□□ -0.36
CPSF7-218ENST00000537641 SMYD5Q6GMV2 418 aa12.78□□□□□ -0.36
CPSF7-218ENST00000537641 MFSD7Q6UXD7 560 aa12.78□□□□□ -0.36
CPSF7-218ENST00000537641 NLRX1Q86UT6 975 aa12.78□□□□□ -0.36
CPSF7-218ENST00000537641 CHSY1Q86X52 802 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms