RNA–Protein interactions for RNA: ENST00000537063.1

UBE3B-207, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 3 BASIC

Gene UBE3B, Length 3,600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-207ENST00000537063 DDX56Q9NY93 547 aaKnown RBP9.85□□□□□ -0.83
UBE3B-207ENST00000537063 A0A1B0GUA9 196 aa9.84□□□□□ -0.83
UBE3B-207ENST00000537063 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.84□□□□□ -0.83
UBE3B-207ENST00000537063 SIGLEC16A6NMB1 481 aa9.84□□□□□ -0.83
UBE3B-207ENST00000537063 LIASO43766 372 aa9.84□□□□□ -0.83
UBE3B-207ENST00000537063 MMP3P08254 477 aa9.84□□□□□ -0.83
UBE3B-207ENST00000537063 OSTNP61366 133 aa9.84□□□□□ -0.83
UBE3B-207ENST00000537063 FKBP1BP68106 108 aa9.84□□□□□ -0.83
UBE3B-207ENST00000537063 IRF5Q13568 498 aa9.84□□□□□ -0.83
UBE3B-207ENST00000537063 SNX1Q13596 522 aa9.84□□□□□ -0.83
UBE3B-207ENST00000537063 DUSP28Q4G0W2 176 aa9.84□□□□□ -0.83
UBE3B-207ENST00000537063 ILDR2Q71H61 639 aa9.84□□□□□ -0.83
UBE3B-207ENST00000537063 CENPTQ96BT3 561 aa9.84□□□□□ -0.83
UBE3B-207ENST00000537063 TRAIPQ9BWF2 469 aa9.84□□□□□ -0.83
UBE3B-207ENST00000537063 CNOT10Q9H9A5 744 aaKnown RBP9.84□□□□□ -0.83
UBE3B-207ENST00000537063 ITGA11Q9UKX5 1188 aa9.84□□□□□ -0.83
UBE3B-207ENST00000537063 NOVA2Q9UNW9 492 aaKnown RBP9.84□□□□□ -0.83
UBE3B-207ENST00000537063 EFR3BQ9Y2G0 817 aa9.84□□□□□ -0.83
UBE3B-207ENST00000537063 CEP83Q9Y592 693 aa9.84□□□□□ -0.83
UBE3B-207ENST00000537063 F8VP50 259 aa9.84□□□□□ -0.83
UBE3B-207ENST00000537063 RAP1GAPP47736 663 aa9.84□□□□□ -0.83
UBE3B-207ENST00000537063 MAGOHP61326 146 aaKnown RBP9.84□□□□□ -0.83
UBE3B-207ENST00000537063 SLC25A11Q02978 314 aaKnown RBP9.84□□□□□ -0.83
UBE3B-207ENST00000537063 SPOCD1Q6ZMY3 1216 aa9.84□□□□□ -0.83
UBE3B-207ENST00000537063 CCDC50Q8IVM0 306 aa9.84□□□□□ -0.83
UBE3B-207ENST00000537063 MAML3Q96JK9 1138 aa9.84□□□□□ -0.83
UBE3B-207ENST00000537063 TWNKQ96RR1 684 aa9.84□□□□□ -0.83
UBE3B-207ENST00000537063 ROPN1BQ9BZX4 212 aaPredicted RBP9.84□□□□□ -0.83
UBE3B-207ENST00000537063 ELOVL4Q9GZR5 314 aa9.84□□□□□ -0.83
UBE3B-207ENST00000537063 SMYD3Q9H7B4 428 aa9.84□□□□□ -0.83
UBE3B-207ENST00000537063 ROPN1Q9HAT0 212 aaPredicted RBP9.84□□□□□ -0.83
UBE3B-207ENST00000537063 RRP15Q9Y3B9 282 aaKnown RBP9.84□□□□□ -0.83
UBE3B-207ENST00000537063 IVNS1ABPQ9Y6Y0 642 aa9.84□□□□□ -0.83
UBE3B-207ENST00000537063 hCG_1818297A0A087WSY0 165 aa9.84□□□□□ -0.83
UBE3B-207ENST00000537063 CCL15-CCL14A0A0B4J2E2 113 aa9.84□□□□□ -0.83
UBE3B-207ENST00000537063 TCEA3O75764 348 aa9.84□□□□□ -0.83
UBE3B-207ENST00000537063 AGTP01019 485 aa9.84□□□□□ -0.83
UBE3B-207ENST00000537063 ITGB3P05106 788 aa9.84□□□□□ -0.83
UBE3B-207ENST00000537063 SMPD1P17405 629 aa9.84□□□□□ -0.83
UBE3B-207ENST00000537063 FGFR4P22455 802 aa9.84□□□□□ -0.83
UBE3B-207ENST00000537063 CDKN2BP42772 138 aa9.84□□□□□ -0.83
UBE3B-207ENST00000537063 MMP13P45452 471 aa9.84□□□□□ -0.83
UBE3B-207ENST00000537063 IGBP1P78318 339 aa9.84□□□□□ -0.83
UBE3B-207ENST00000537063 LACTBP83111 547 aaPredicted RBP9.84□□□□□ -0.83
UBE3B-207ENST00000537063 IFFO1Q0D2I5 559 aa9.84□□□□□ -0.83
UBE3B-207ENST00000537063 CCL15Q16663 113 aa9.84□□□□□ -0.83
UBE3B-207ENST00000537063 CCDC142Q17RM4 750 aa9.84□□□□□ -0.83
UBE3B-207ENST00000537063 ZNF394Q53GI3 561 aa9.84□□□□□ -0.83
UBE3B-207ENST00000537063 GPR142Q7Z601 462 aa9.84□□□□□ -0.83
UBE3B-207ENST00000537063 XYLT1Q86Y38 959 aa9.84□□□□□ -0.83
UBE3B-207ENST00000537063 BBOF1Q8ND07 529 aa9.84□□□□□ -0.83
UBE3B-207ENST00000537063 HEMGNQ9BXL5 484 aa9.84□□□□□ -0.83
UBE3B-207ENST00000537063 ADAM7Q9H2U9 754 aa9.84□□□□□ -0.83
UBE3B-207ENST00000537063 CDC42EP4Q9H3Q1 356 aaKnown RBP9.84□□□□□ -0.83
UBE3B-207ENST00000537063 WDR35Q9P2L0 1181 aa9.84□□□□□ -0.83
UBE3B-207ENST00000537063 HMGXB4Q9UGU5 601 aa9.84□□□□□ -0.83
UBE3B-207ENST00000537063 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.84□□□□□ -0.83
UBE3B-207ENST00000537063 H3BRB1 525 aa9.83□□□□□ -0.84
UBE3B-207ENST00000537063 VTNP04004 478 aa9.83□□□□□ -0.84
UBE3B-207ENST00000537063 ATF2P15336 505 aa9.83□□□□□ -0.84
UBE3B-207ENST00000537063 TMOD1P28289 359 aa9.83□□□□□ -0.84
UBE3B-207ENST00000537063 HPDP32754 393 aaPredicted RBP9.83□□□□□ -0.84
UBE3B-207ENST00000537063 CHKAP35790 457 aa9.83□□□□□ -0.84
UBE3B-207ENST00000537063 GRM5P41594 1212 aa9.83□□□□□ -0.84
UBE3B-207ENST00000537063 ITGA8P53708 1063 aa9.83□□□□□ -0.84
UBE3B-207ENST00000537063 LMNB2Q03252 620 aa9.83□□□□□ -0.84
UBE3B-207ENST00000537063 PTPN11Q06124 597 aaPredicted RBP9.83□□□□□ -0.84
UBE3B-207ENST00000537063 GRIK4Q16099 956 aa9.83□□□□□ -0.84
UBE3B-207ENST00000537063 C6orf118Q5T5N4 469 aa9.83□□□□□ -0.84
UBE3B-207ENST00000537063 MFSD7Q6UXD7 560 aa9.83□□□□□ -0.84
UBE3B-207ENST00000537063 ARFGAP1Q8N6T3 406 aa9.83□□□□□ -0.84
UBE3B-207ENST00000537063 NKD2Q969F2 451 aaPredicted RBP9.83□□□□□ -0.84
UBE3B-207ENST00000537063 MCRS1Q96EZ8 462 aa9.83□□□□□ -0.84
UBE3B-207ENST00000537063 CPB2Q96IY4 423 aa9.83□□□□□ -0.84
UBE3B-207ENST00000537063 TUT1Q9H6E5 874 aaKnown RBP9.83□□□□□ -0.84
UBE3B-207ENST00000537063 ASIC3Q9UHC3 531 aa9.83□□□□□ -0.84
UBE3B-207ENST00000537063 AKT3Q9Y243 479 aa9.83□□□□□ -0.84
UBE3B-207ENST00000537063 DRG1Q9Y295 367 aaKnown RBP9.83□□□□□ -0.84
UBE3B-207ENST00000537063 USTQ9Y2C2 406 aa9.83□□□□□ -0.84
UBE3B-207ENST00000537063 DERAQ9Y315 318 aa9.83□□□□□ -0.84
UBE3B-207ENST00000537063 TRAPPC3O43617 180 aa9.83□□□□□ -0.84
UBE3B-207ENST00000537063 KRT1P04264 644 aa9.83□□□□□ -0.84
UBE3B-207ENST00000537063 POLR2BP30876 1174 aaKnown RBP9.83□□□□□ -0.84
UBE3B-207ENST00000537063 ZNF268Q14587 947 aaPredicted RBP9.83□□□□□ -0.84
UBE3B-207ENST00000537063 OASLQ15646 514 aaKnown RBP9.83□□□□□ -0.84
UBE3B-207ENST00000537063 FAM110CQ1W6H9 321 aa9.83□□□□□ -0.84
UBE3B-207ENST00000537063 TMEM132AQ24JP5 1023 aa9.83□□□□□ -0.84
UBE3B-207ENST00000537063 WDR72Q3MJ13 1102 aa9.83□□□□□ -0.84
UBE3B-207ENST00000537063 ATP13A4Q4VNC1 1196 aa9.83□□□□□ -0.84
UBE3B-207ENST00000537063 EAPPQ56P03 285 aaPredicted RBP9.83□□□□□ -0.84
UBE3B-207ENST00000537063 CYP4A22Q5TCH4 519 aa9.83□□□□□ -0.84
UBE3B-207ENST00000537063 TXNRD3NBQ6F5E7 133 aa9.83□□□□□ -0.84
UBE3B-207ENST00000537063 HIBCHQ6NVY1 386 aaPredicted RBP9.83□□□□□ -0.84
UBE3B-207ENST00000537063 KIAA0319LQ8IZA0 1049 aa9.83□□□□□ -0.84
UBE3B-207ENST00000537063 TMEM130Q8N3G9 435 aa9.83□□□□□ -0.84
UBE3B-207ENST00000537063 CCDC89Q8N998 374 aa9.83□□□□□ -0.84
UBE3B-207ENST00000537063 CCHCR1Q8TD31 782 aa9.83□□□□□ -0.84
UBE3B-207ENST00000537063 CPXM1Q96SM3 734 aa9.83□□□□□ -0.84
UBE3B-207ENST00000537063 FOXP3Q9BZS1 431 aa9.83□□□□□ -0.84
UBE3B-207ENST00000537063 ADAMTS10Q9H324 1103 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms