RNA–Protein interactions for RNA: ENST00000535739.5

LTBR-205, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5

Gene LTBR, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-205ENST00000535739 SATB1Q01826 763 aa22.22■■□□□ 1.15
LTBR-205ENST00000535739 RESTQ13127 1097 aa22.22■■□□□ 1.15
LTBR-205ENST00000535739 PUM1Q14671 1186 aaKnown RBP eCLIP22.22■■□□□ 1.15
LTBR-205ENST00000535739 PPP2R5DQ14738 602 aa22.22■■□□□ 1.15
LTBR-205ENST00000535739 WDR44Q5JSH3 913 aa22.22■■□□□ 1.15
LTBR-205ENST00000535739 TXNDC11Q6PKC3 985 aa22.22■■□□□ 1.15
LTBR-205ENST00000535739 SV2BQ7L1I2 683 aa22.22■■□□□ 1.15
LTBR-205ENST00000535739 SAAL1Q96ER3 474 aa22.22■■□□□ 1.15
LTBR-205ENST00000535739 MSANTD3Q96H12 275 aa22.22■■□□□ 1.15
LTBR-205ENST00000535739 FAM213AQ9BRX8 229 aa22.22■■□□□ 1.15
LTBR-205ENST00000535739 TASP1Q9H6P5 420 aa22.22■■□□□ 1.15
LTBR-205ENST00000535739 ABI2Q9NYB9 513 aaPredicted RBP22.22■■□□□ 1.15
LTBR-205ENST00000535739 SEL1LQ9UBV2 794 aa22.22■■□□□ 1.15
LTBR-205ENST00000535739 SPTBN2O15020 2390 aa22.21■■□□□ 1.15
LTBR-205ENST00000535739 RALGAPA1Q6GYQ0 2036 aa22.21■■□□□ 1.15
LTBR-205ENST00000535739 MYBPHLA2RUH7 354 aa22.21■■□□□ 1.15
LTBR-205ENST00000535739 SPECC1L-ADORA2AF8WAN1 911 aa22.21■■□□□ 1.15
LTBR-205ENST00000535739 HAPLN1P10915 354 aaPredicted RBP22.21■■□□□ 1.15
LTBR-205ENST00000535739 GAP43P17677 238 aa22.21■■□□□ 1.15
LTBR-205ENST00000535739 CXCL12P48061 93 aa22.21■■□□□ 1.15
LTBR-205ENST00000535739 CASP5P51878 434 aa22.21■■□□□ 1.15
LTBR-205ENST00000535739 TAF12Q16514 161 aa22.21■■□□□ 1.15
LTBR-205ENST00000535739 RSPO4Q2I0M5 234 aaPredicted RBP22.21■■□□□ 1.15
LTBR-205ENST00000535739 SV2CQ496J9 727 aa22.21■■□□□ 1.15
LTBR-205ENST00000535739 ARHGAP29Q52LW3 1261 aa22.21■■□□□ 1.15
LTBR-205ENST00000535739 L1TD1Q5T7N2 865 aaKnown RBP22.21■■□□□ 1.15
LTBR-205ENST00000535739 SPPL2BQ8TCT7 592 aa22.21■■□□□ 1.15
LTBR-205ENST00000535739 C2orf15Q8WU43 125 aaKnown RBP22.21■■□□□ 1.15
LTBR-205ENST00000535739 SECISBP2LQ93073 1101 aaKnown RBP22.21■■□□□ 1.15
LTBR-205ENST00000535739 ACCSQ96QU6 501 aa22.21■■□□□ 1.15
LTBR-205ENST00000535739 SMG9Q9H0W8 520 aaKnown RBP22.21■■□□□ 1.15
LTBR-205ENST00000535739 OBP2AQ9NY56 170 aa22.21■■□□□ 1.15
LTBR-205ENST00000535739 DLL3Q9NYJ7 618 aa22.21■■□□□ 1.15
LTBR-205ENST00000535739 EXOC7Q9UPT5 735 aa22.21■■□□□ 1.15
LTBR-205ENST00000535739 NCOR2Q9Y618 2525 aa22.2■■□□□ 1.14
LTBR-205ENST00000535739 MED19A0JLT2 244 aaPredicted RBP22.2■■□□□ 1.14
LTBR-205ENST00000535739 GCNT3O95395 438 aa22.2■■□□□ 1.14
LTBR-205ENST00000535739 CDC25CP30307 473 aa22.2■■□□□ 1.14
LTBR-205ENST00000535739 CTHP32929 405 aa22.2■■□□□ 1.14
LTBR-205ENST00000535739 TXLNAP40222 546 aa22.2■■□□□ 1.14
LTBR-205ENST00000535739 TFAMQ00059 246 aaKnown RBP22.2■■□□□ 1.14
LTBR-205ENST00000535739 TNK2Q07912 1038 aa22.2■■□□□ 1.14
LTBR-205ENST00000535739 SMARCB1Q12824 385 aa22.2■■□□□ 1.14
LTBR-205ENST00000535739 LPAL2Q16609 132 aa22.2■■□□□ 1.14
LTBR-205ENST00000535739 SCARA3Q6AZY7 606 aa22.2■■□□□ 1.14
LTBR-205ENST00000535739 C1orf228Q6PIY5 440 aa22.2■■□□□ 1.14
LTBR-205ENST00000535739 NT5DC4Q86YG4 428 aa22.2■■□□□ 1.14
LTBR-205ENST00000535739 BPIFB1Q8TDL5 484 aa22.2■■□□□ 1.14
LTBR-205ENST00000535739 FAM84AQ96KN4 292 aa22.2■■□□□ 1.14
LTBR-205ENST00000535739 ZNF560Q96MR9 790 aa22.2■■□□□ 1.14
LTBR-205ENST00000535739 GCNAQ96QF7 691 aa22.2■■□□□ 1.14
LTBR-205ENST00000535739 SLC46A2Q9BY10 475 aa22.2■■□□□ 1.14
LTBR-205ENST00000535739 PANK2Q9BZ23 570 aa22.2■■□□□ 1.14
LTBR-205ENST00000535739 TMLHEQ9NVH6 421 aa22.2■■□□□ 1.14
LTBR-205ENST00000535739 IDEP14735 1019 aa22.19■■□□□ 1.14
LTBR-205ENST00000535739 SYT1P21579 422 aa22.19■■□□□ 1.14
LTBR-205ENST00000535739 WEE1P30291 646 aa22.19■■□□□ 1.14
LTBR-205ENST00000535739 POLR2BP30876 1174 aaKnown RBP22.19■■□□□ 1.14
LTBR-205ENST00000535739 LRRC32Q14392 662 aa22.19■■□□□ 1.14
LTBR-205ENST00000535739 PON2Q15165 354 aa22.19■■□□□ 1.14
LTBR-205ENST00000535739 Q6ZS52 159 aa22.19■■□□□ 1.14
LTBR-205ENST00000535739 RALGPS2Q86X27 583 aaPredicted RBP22.19■■□□□ 1.14
LTBR-205ENST00000535739 BRSK2Q8IWQ3 736 aa22.19■■□□□ 1.14
LTBR-205ENST00000535739 DCP1BQ8IZD4 617 aaKnown RBP22.19■■□□□ 1.14
LTBR-205ENST00000535739 SPEM1Q8N4L4 309 aa22.19■■□□□ 1.14
LTBR-205ENST00000535739 GPR161Q8N6U8 529 aaKnown RBP22.19■■□□□ 1.14
LTBR-205ENST00000535739 FGFBP2Q9BYJ0 223 aa22.19■■□□□ 1.14
LTBR-205ENST00000535739 AGAP1Q9UPQ3 857 aa22.19■■□□□ 1.14
LTBR-205ENST00000535739 PCDHB5Q9Y5E4 795 aa22.19■■□□□ 1.14
LTBR-205ENST00000535739 A0A087X0B3 334 aa22.18■■□□□ 1.14
LTBR-205ENST00000535739 GOLGA8IPA6NC78 632 aa22.18■■□□□ 1.14
LTBR-205ENST00000535739 GOLGA8JA6NMD2 632 aa22.18■■□□□ 1.14
LTBR-205ENST00000535739 ITGB3P05106 788 aa22.18■■□□□ 1.14
LTBR-205ENST00000535739 PNPLA4P41247 253 aa22.18■■□□□ 1.14
LTBR-205ENST00000535739 GPR15P49685 360 aa22.18■■□□□ 1.14
LTBR-205ENST00000535739 DMWDQ09019 674 aa22.18■■□□□ 1.14
LTBR-205ENST00000535739 TMEM150AQ86TG1 271 aa22.18■■□□□ 1.14
LTBR-205ENST00000535739 SYCP3Q8IZU3 236 aa22.18■■□□□ 1.14
LTBR-205ENST00000535739 C1orf127Q8N9H9 656 aa22.18■■□□□ 1.14
LTBR-205ENST00000535739 STKLD1Q8NE28 680 aa22.18■■□□□ 1.14
LTBR-205ENST00000535739 OLFML3Q9NRN5 406 aa22.18■■□□□ 1.14
LTBR-205ENST00000535739 C2orf42Q9NWW7 574 aa22.18■■□□□ 1.14
LTBR-205ENST00000535739 PCDHB13Q9Y5F0 798 aa22.18■■□□□ 1.14
LTBR-205ENST00000535739 SDK1Q7Z5N4 2213 aa22.18■■□□□ 1.14
LTBR-205ENST00000535739 HMGA1P17096 107 aaKnown RBP22.17■■□□□ 1.14
LTBR-205ENST00000535739 TGM1P22735 817 aa22.17■■□□□ 1.14
LTBR-205ENST00000535739 STAT6P42226 847 aa22.17■■□□□ 1.14
LTBR-205ENST00000535739 TSPY1Q01534 308 aa22.17■■□□□ 1.14
LTBR-205ENST00000535739 DGKKQ5KSL6 1271 aa22.17■■□□□ 1.14
LTBR-205ENST00000535739 CCDC73Q6ZRK6 1079 aa22.17■■□□□ 1.14
LTBR-205ENST00000535739 CMTM8Q8IZV2 173 aa22.17■■□□□ 1.14
LTBR-205ENST00000535739 PDCL2Q8N4E4 241 aa22.17■■□□□ 1.14
LTBR-205ENST00000535739 CELF5Q8N6W0 485 aaKnown RBP22.17■■□□□ 1.14
LTBR-205ENST00000535739 NOC3LQ8WTT2 800 aaKnown RBP22.17■■□□□ 1.14
LTBR-205ENST00000535739 USP28Q96RU2 1077 aa22.17■■□□□ 1.14
LTBR-205ENST00000535739 PI4K2AQ9BTU6 479 aa22.17■■□□□ 1.14
LTBR-205ENST00000535739 PCIF1Q9H4Z3 704 aa22.17■■□□□ 1.14
LTBR-205ENST00000535739 RBAKQ9NYW8 714 aaPredicted RBP22.17■■□□□ 1.14
LTBR-205ENST00000535739 GMEB2Q9UKD1 530 aa22.17■■□□□ 1.14
LTBR-205ENST00000535739 RAB23Q9ULC3 237 aa22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms