RNA–Protein interactions for RNA: ENST00000535493.5

HDAC4-214, Transcript of histone deacetylase 4, humanhuman

TSL 2

Gene HDAC4, Length 2,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-214ENST00000535493 ZNF276Q8N554 614 aa14.11□□□□□ -0.15
HDAC4-214ENST00000535493 KCTD17Q8N5Z5 321 aa14.11□□□□□ -0.15
HDAC4-214ENST00000535493 ALLCQ8N6M5 410 aa14.11□□□□□ -0.15
HDAC4-214ENST00000535493 BBOF1Q8ND07 529 aa14.11□□□□□ -0.15
HDAC4-214ENST00000535493 SHKBP1Q8TBC3 707 aa14.11□□□□□ -0.15
HDAC4-214ENST00000535493 LRRN4Q8WUT4 740 aa14.11□□□□□ -0.15
HDAC4-214ENST00000535493 FAM111AQ96PZ2 611 aa14.11□□□□□ -0.15
HDAC4-214ENST00000535493 TAAR1Q96RJ0 339 aa14.11□□□□□ -0.15
HDAC4-214ENST00000535493 RANBP17Q9H2T7 1088 aaKnown RBP14.11□□□□□ -0.15
HDAC4-214ENST00000535493 ZWILCHQ9H900 591 aa14.11□□□□□ -0.15
HDAC4-214ENST00000535493 TAS2R1Q9NYW7 299 aa14.11□□□□□ -0.15
HDAC4-214ENST00000535493 ANKFY1Q9P2R3 1169 aa14.11□□□□□ -0.15
HDAC4-214ENST00000535493 SMG5Q9UPR3 1016 aaKnown RBP14.11□□□□□ -0.15
HDAC4-214ENST00000535493 FAM237BA0A1B0GVD1 139 aa14.1□□□□□ -0.15
HDAC4-214ENST00000535493 E5RJQ4 531 aa14.1□□□□□ -0.15
HDAC4-214ENST00000535493 FAM155BO75949 473 aa14.1□□□□□ -0.15
HDAC4-214ENST00000535493 HAUS5O94927 633 aa14.1□□□□□ -0.15
HDAC4-214ENST00000535493 CYP1A1P04798 512 aaPredicted RBP14.1□□□□□ -0.15
HDAC4-214ENST00000535493 KITP10721 976 aa14.1□□□□□ -0.15
HDAC4-214ENST00000535493 BGNP21810 368 aa14.1□□□□□ -0.15
HDAC4-214ENST00000535493 PAPOLAP51003 745 aaKnown RBP14.1□□□□□ -0.15
HDAC4-214ENST00000535493 THOC5Q13769 683 aaKnown RBP14.1□□□□□ -0.15
HDAC4-214ENST00000535493 HIF1AQ16665 826 aa14.1□□□□□ -0.15
HDAC4-214ENST00000535493 PPP1R15BQ5SWA1 713 aa14.1□□□□□ -0.15
HDAC4-214ENST00000535493 FOXB2Q5VYV0 432 aa14.1□□□□□ -0.15
HDAC4-214ENST00000535493 MAP4K3Q8IVH8 894 aa14.1□□□□□ -0.15
HDAC4-214ENST00000535493 KBTBD2Q8IY47 623 aa14.1□□□□□ -0.15
HDAC4-214ENST00000535493 SLC25A41Q8N5S1 370 aa14.1□□□□□ -0.15
HDAC4-214ENST00000535493 FBXO36Q8NEA4 188 aa14.1□□□□□ -0.15
HDAC4-214ENST00000535493 EXD1Q8NHP7 514 aa14.1□□□□□ -0.15
HDAC4-214ENST00000535493 CEP170P1Q96L14 293 aa14.1□□□□□ -0.15
HDAC4-214ENST00000535493 MFSD14AQ96MC6 490 aa14.1□□□□□ -0.15
HDAC4-214ENST00000535493 FNBP1Q96RU3 617 aa14.1□□□□□ -0.15
HDAC4-214ENST00000535493 MECRQ9BV79 373 aa14.1□□□□□ -0.15
HDAC4-214ENST00000535493 MANSC1Q9H8J5 431 aa14.1□□□□□ -0.15
HDAC4-214ENST00000535493 AVENQ9NQS1 362 aaPredicted RBP14.1□□□□□ -0.15
HDAC4-214ENST00000535493 MARCOQ9UEW3 520 aaPredicted RBP14.1□□□□□ -0.15
HDAC4-214ENST00000535493 LIN7AO14910 233 aaPredicted RBP14.1□□□□□ -0.15
HDAC4-214ENST00000535493 PSTPIP1O43586 416 aa14.1□□□□□ -0.15
HDAC4-214ENST00000535493 AVILO75366 819 aa14.1□□□□□ -0.15
HDAC4-214ENST00000535493 ABHD2P08910 425 aa14.1□□□□□ -0.15
HDAC4-214ENST00000535493 NEK3P51956 506 aa14.1□□□□□ -0.15
HDAC4-214ENST00000535493 GEMIN4P57678 1058 aaKnown RBP14.1□□□□□ -0.15
HDAC4-214ENST00000535493 C11orf91Q3C1V1 193 aa14.1□□□□□ -0.15
HDAC4-214ENST00000535493 WDR44Q5JSH3 913 aa14.1□□□□□ -0.15
HDAC4-214ENST00000535493 LIN9Q5TKA1 542 aa14.1□□□□□ -0.15
HDAC4-214ENST00000535493 CENPUQ71F23 418 aa14.1□□□□□ -0.15
HDAC4-214ENST00000535493 IGDCC3Q8IVU1 814 aa14.1□□□□□ -0.15
HDAC4-214ENST00000535493 TEX9Q8N6V9 391 aa14.1□□□□□ -0.15
HDAC4-214ENST00000535493 BTBD10Q9BSF8 475 aa14.1□□□□□ -0.15
HDAC4-214ENST00000535493 TMEM120AQ9BXJ8 343 aa14.1□□□□□ -0.15
HDAC4-214ENST00000535493 RAVER2Q9HCJ3 691 aaKnown RBP14.1□□□□□ -0.15
HDAC4-214ENST00000535493 CHMP2BQ9UQN3 213 aa14.1□□□□□ -0.15
HDAC4-214ENST00000535493 TMX2Q9Y320 296 aa14.1□□□□□ -0.15
HDAC4-214ENST00000535493 CENPFP49454 3210 aa14.09□□□□□ -0.15
HDAC4-214ENST00000535493 ALOX15BO15296 676 aa14.09□□□□□ -0.15
HDAC4-214ENST00000535493 TROVE2P10155 538 aaKnown RBP eCLIP14.09□□□□□ -0.15
HDAC4-214ENST00000535493 ARFIP2P53365 341 aa14.09□□□□□ -0.15
HDAC4-214ENST00000535493 GCNT1Q02742 428 aa14.09□□□□□ -0.15
HDAC4-214ENST00000535493 AOC3Q16853 763 aa14.09□□□□□ -0.15
HDAC4-214ENST00000535493 WASHC2DQ5SRD0 308 aa14.09□□□□□ -0.15
HDAC4-214ENST00000535493 AP1ARQ63HQ0 302 aa14.09□□□□□ -0.15
HDAC4-214ENST00000535493 RELL1Q8IUW5 271 aa14.09□□□□□ -0.15
HDAC4-214ENST00000535493 CYTH2Q99418 400 aa14.09□□□□□ -0.15
HDAC4-214ENST00000535493 SH3GL3Q99963 347 aa14.09□□□□□ -0.15
HDAC4-214ENST00000535493 TSSK1BQ9BXA7 367 aa14.09□□□□□ -0.15
HDAC4-214ENST00000535493 EHMT1Q9H9B1 1298 aa14.09□□□□□ -0.15
HDAC4-214ENST00000535493 KCNK13Q9HB14 408 aa14.09□□□□□ -0.15
HDAC4-214ENST00000535493 TJP2Q9UDY2 1190 aa14.09□□□□□ -0.15
HDAC4-214ENST00000535493 CCDC195A0A1B0GUA6 201 aa14.09□□□□□ -0.15
HDAC4-214ENST00000535493 SIGLEC16A6NMB1 481 aa14.09□□□□□ -0.15
HDAC4-214ENST00000535493 VNN1O95497 513 aa14.09□□□□□ -0.15
HDAC4-214ENST00000535493 CD48P09326 243 aa14.09□□□□□ -0.15
HDAC4-214ENST00000535493 MRPS35P82673 323 aaKnown RBP14.09□□□□□ -0.15
HDAC4-214ENST00000535493 CC2D2BQ6DHV5 1058 aa14.09□□□□□ -0.15
HDAC4-214ENST00000535493 DCUN1D2Q6PH85 259 aa14.09□□□□□ -0.15
HDAC4-214ENST00000535493 TAS1R3Q7RTX0 852 aa14.09□□□□□ -0.15
HDAC4-214ENST00000535493 GPD1LQ8N335 351 aa14.09□□□□□ -0.15
HDAC4-214ENST00000535493 RIBC1Q8N443 379 aaPredicted RBP14.09□□□□□ -0.15
HDAC4-214ENST00000535493 FEZF2Q8TBJ5 459 aa14.09□□□□□ -0.15
HDAC4-214ENST00000535493 CHURC1Q8WUH1 139 aa14.09□□□□□ -0.15
HDAC4-214ENST00000535493 FAM136AQ96C01 138 aa14.09□□□□□ -0.15
HDAC4-214ENST00000535493 MASTLQ96GX5 879 aa14.09□□□□□ -0.15
HDAC4-214ENST00000535493 SERAC1Q96JX3 654 aa14.09□□□□□ -0.15
HDAC4-214ENST00000535493 MOV10L1Q9BXT6 1211 aaKnown RBP14.09□□□□□ -0.15
HDAC4-214ENST00000535493 NMUR2Q9GZQ4 415 aa14.09□□□□□ -0.15
HDAC4-214ENST00000535493 NUB1Q9Y5A7 615 aa14.09□□□□□ -0.15
HDAC4-214ENST00000535493 CCDC22O60826 627 aa14.08□□□□□ -0.15
HDAC4-214ENST00000535493 TJP3O95049 919 aa14.08□□□□□ -0.15
HDAC4-214ENST00000535493 MYL2P10916 166 aa14.08□□□□□ -0.15
HDAC4-214ENST00000535493 ACADSP16219 412 aa14.08□□□□□ -0.15
HDAC4-214ENST00000535493 VHLP40337 213 aa14.08□□□□□ -0.15
HDAC4-214ENST00000535493 GCLCP48506 637 aaPredicted RBP14.08□□□□□ -0.15
HDAC4-214ENST00000535493 KDSRQ06136 332 aa14.08□□□□□ -0.15
HDAC4-214ENST00000535493 SPOCD1Q6ZMY3 1216 aa14.08□□□□□ -0.15
HDAC4-214ENST00000535493 PODNQ7Z5L7 613 aa14.08□□□□□ -0.15
HDAC4-214ENST00000535493 ABRAQ8N0Z2 381 aa14.08□□□□□ -0.15
HDAC4-214ENST00000535493 PDCD7Q8N8D1 485 aaKnown RBP14.08□□□□□ -0.15
HDAC4-214ENST00000535493 RNF217Q8TC41 542 aa14.08□□□□□ -0.15
HDAC4-214ENST00000535493 FAM81BQ96LP2 452 aa14.08□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms