RNA–Protein interactions for RNA: ENST00000535302.6

SPG11-203, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-203ENST00000535302 C10orf120Q5SQS8 335 aa13.18□□□□□ -0.3
SPG11-203ENST00000535302 ADSSL1Q8N142 457 aa13.18□□□□□ -0.3
SPG11-203ENST00000535302 FAM71DQ8N9W8 422 aa13.18□□□□□ -0.3
SPG11-203ENST00000535302 STK33Q9BYT3 514 aa13.18□□□□□ -0.3
SPG11-203ENST00000535302 KCNH7Q9NS40 1196 aa13.18□□□□□ -0.3
SPG11-203ENST00000535302 NEU2Q9Y3R4 380 aa13.18□□□□□ -0.3
SPG11-203ENST00000535302 KLHL18O94889 574 aa13.18□□□□□ -0.3
SPG11-203ENST00000535302 HIST1H2AGP0C0S8 130 aaPredicted RBP13.18□□□□□ -0.3
SPG11-203ENST00000535302 HIST1H2ADP20671 130 aa13.18□□□□□ -0.3
SPG11-203ENST00000535302 HOXA7P31268 230 aaPredicted RBP13.18□□□□□ -0.3
SPG11-203ENST00000535302 HSPA9P38646 679 aaKnown RBP13.18□□□□□ -0.3
SPG11-203ENST00000535302 ARHGEF7Q14155 803 aa13.18□□□□□ -0.3
SPG11-203ENST00000535302 EZH2Q15910 746 aaKnown RBP13.18□□□□□ -0.3
SPG11-203ENST00000535302 KHDRBS2Q5VWX1 349 aaKnown RBP13.18□□□□□ -0.3
SPG11-203ENST00000535302 ASAP3Q8TDY4 903 aa13.18□□□□□ -0.3
SPG11-203ENST00000535302 HIST1H2AHQ96KK5 128 aa13.18□□□□□ -0.3
SPG11-203ENST00000535302 HIST1H2AJQ99878 128 aa13.18□□□□□ -0.3
SPG11-203ENST00000535302 H2AFJQ9BTM1 129 aa13.18□□□□□ -0.3
SPG11-203ENST00000535302 QRICH2Q9H0J4 1663 aa13.18□□□□□ -0.3
SPG11-203ENST00000535302 SLC16A3O15427 465 aaKnown RBP13.17□□□□□ -0.3
SPG11-203ENST00000535302 CHRM3P20309 590 aa13.17□□□□□ -0.3
SPG11-203ENST00000535302 COMTP21964 271 aa13.17□□□□□ -0.3
SPG11-203ENST00000535302 ERAP2Q6P179 960 aa13.17□□□□□ -0.3
SPG11-203ENST00000535302 DEFB129Q9H1M3 183 aa13.17□□□□□ -0.3
SPG11-203ENST00000535302 ZFYVE28Q9HCC9 887 aa13.17□□□□□ -0.3
SPG11-203ENST00000535302 NAGPAQ9UK23 515 aa13.17□□□□□ -0.3
SPG11-203ENST00000535302 LOC100653049A0A140TA62 436 aa13.17□□□□□ -0.3
SPG11-203ENST00000535302 KRT34O76011 436 aa13.17□□□□□ -0.3
SPG11-203ENST00000535302 RPS7P62081 194 aaKnown RBP13.17□□□□□ -0.3
SPG11-203ENST00000535302 NR1H3Q13133 447 aa13.17□□□□□ -0.3
SPG11-203ENST00000535302 TRIM25Q14258 630 aaKnown RBP13.17□□□□□ -0.3
SPG11-203ENST00000535302 PDIA5Q14554 519 aa13.17□□□□□ -0.3
SPG11-203ENST00000535302 EML3Q32P44 896 aa13.17□□□□□ -0.3
SPG11-203ENST00000535302 GALNTL6Q49A17 601 aa13.17□□□□□ -0.3
SPG11-203ENST00000535302 DNAAF5Q86Y56 855 aa13.17□□□□□ -0.3
SPG11-203ENST00000535302 ZNF34Q8IZ26 560 aa13.17□□□□□ -0.3
SPG11-203ENST00000535302 MXRA8Q9BRK3 442 aa13.17□□□□□ -0.3
SPG11-203ENST00000535302 NDEL1Q9GZM8 345 aa13.17□□□□□ -0.3
SPG11-203ENST00000535302 PCDHB7Q9Y5E2 793 aa13.17□□□□□ -0.3
SPG11-203ENST00000535302 RNF103O00237 685 aa13.17□□□□□ -0.3
SPG11-203ENST00000535302 PHF2O75151 1096 aa13.17□□□□□ -0.3
SPG11-203ENST00000535302 MLNP12872 115 aa13.17□□□□□ -0.3
SPG11-203ENST00000535302 DARSP14868 501 aaKnown RBP13.17□□□□□ -0.3
SPG11-203ENST00000535302 PTPN7P35236 360 aa13.17□□□□□ -0.3
SPG11-203ENST00000535302 TRIP4Q15650 581 aaPredicted RBP13.17□□□□□ -0.3
SPG11-203ENST00000535302 SGSM1Q2NKQ1 1148 aa13.17□□□□□ -0.3
SPG11-203ENST00000535302 GNASQ5JWF2 1037 aa13.17□□□□□ -0.3
SPG11-203ENST00000535302 KRT77Q7Z794 578 aa13.17□□□□□ -0.3
SPG11-203ENST00000535302 CACUL1Q86Y37 369 aa13.17□□□□□ -0.3
SPG11-203ENST00000535302 TRIM48Q8IWZ4 208 aa13.17□□□□□ -0.3
SPG11-203ENST00000535302 FOPNLQ96NB1 174 aa13.17□□□□□ -0.3
SPG11-203ENST00000535302 TARS2Q9BW92 718 aaKnown RBP13.17□□□□□ -0.3
SPG11-203ENST00000535302 SH3BP1Q9Y3L3 701 aa13.17□□□□□ -0.3
SPG11-203ENST00000535302 CHD1O14646 1710 aa13.17□□□□□ -0.3
SPG11-203ENST00000535302 CSDE1O75534 798 aaKnown RBP13.17□□□□□ -0.3
SPG11-203ENST00000535302 DDI2Q5TDH0 399 aa13.17□□□□□ -0.3
SPG11-203ENST00000535302 RUSC1Q9BVN2 902 aa13.17□□□□□ -0.3
SPG11-203ENST00000535302 VCPKMTQ9H867 229 aa13.17□□□□□ -0.3
SPG11-203ENST00000535302 PKD2L2Q9NZM6 624 aa13.17□□□□□ -0.3
SPG11-203ENST00000535302 SNX12Q9UMY4 172 aa13.17□□□□□ -0.3
SPG11-203ENST00000535302 ARHGEF40Q8TER5 1519 aa13.17□□□□□ -0.3
SPG11-203ENST00000535302 CYP7B1O75881 506 aa13.17□□□□□ -0.3
SPG11-203ENST00000535302 VTNP04004 478 aa13.17□□□□□ -0.3
SPG11-203ENST00000535302 FEN1P39748 380 aaKnown RBP13.17□□□□□ -0.3
SPG11-203ENST00000535302 MAPK9P45984 424 aa13.17□□□□□ -0.3
SPG11-203ENST00000535302 AP3M2P53677 418 aa13.17□□□□□ -0.3
SPG11-203ENST00000535302 ARMC6Q6NXE6 501 aa13.17□□□□□ -0.3
SPG11-203ENST00000535302 OTOAQ7RTW8 1153 aa13.17□□□□□ -0.3
SPG11-203ENST00000535302 WNK4Q96J92 1243 aa13.17□□□□□ -0.3
SPG11-203ENST00000535302 PLEKP08567 350 aaPredicted RBP13.16□□□□□ -0.3
SPG11-203ENST00000535302 S100A5P33763 92 aa13.16□□□□□ -0.3
SPG11-203ENST00000535302 THPOP40225 353 aa13.16□□□□□ -0.3
SPG11-203ENST00000535302 KCNB1Q14721 858 aa13.16□□□□□ -0.3
SPG11-203ENST00000535302 SLC18A3Q16572 532 aa13.16□□□□□ -0.3
SPG11-203ENST00000535302 PGS1Q32NB8 556 aa13.16□□□□□ -0.3
SPG11-203ENST00000535302 IER5Q5VY09 327 aa13.16□□□□□ -0.3
SPG11-203ENST00000535302 GPR63Q9BZJ6 419 aa13.16□□□□□ -0.3
SPG11-203ENST00000535302 A0A1W2PQC6 194 aa13.16□□□□□ -0.3
SPG11-203ENST00000535302 RCAN1P53805 252 aa13.16□□□□□ -0.3
SPG11-203ENST00000535302 TAP1Q03518 808 aa13.16□□□□□ -0.3
SPG11-203ENST00000535302 EME1Q96AY2 570 aa13.16□□□□□ -0.3
SPG11-203ENST00000535302 PARK7Q99497 189 aaKnown RBP13.16□□□□□ -0.3
SPG11-203ENST00000535302 C7orf25Q9BPX7 421 aa13.16□□□□□ -0.3
SPG11-203ENST00000535302 ARHGEF3Q9NR81 526 aa13.16□□□□□ -0.3
SPG11-203ENST00000535302 RAD51CO43502 376 aa13.16□□□□□ -0.3
SPG11-203ENST00000535302 NTSR2O95665 410 aa13.16□□□□□ -0.3
SPG11-203ENST00000535302 SRGNP10124 158 aa13.16□□□□□ -0.3
SPG11-203ENST00000535302 SOX10P56693 466 aa13.16□□□□□ -0.3
SPG11-203ENST00000535302 DHX34Q14147 1143 aaKnown RBP13.16□□□□□ -0.3
SPG11-203ENST00000535302 SCARA3Q6AZY7 606 aa13.16□□□□□ -0.3
SPG11-203ENST00000535302 CRAMP1Q96RY5 1269 aa13.16□□□□□ -0.3
SPG11-203ENST00000535302 POP1Q99575 1024 aaKnown RBP13.16□□□□□ -0.3
SPG11-203ENST00000535302 BCL2L14Q9BZR8 327 aa13.16□□□□□ -0.3
SPG11-203ENST00000535302 MAN1C1Q9NR34 630 aa13.16□□□□□ -0.3
SPG11-203ENST00000535302 LCMT1Q9UIC8 334 aa13.16□□□□□ -0.3
SPG11-203ENST00000535302 LSM7Q9UK45 103 aaKnown RBP13.16□□□□□ -0.3
SPG11-203ENST00000535302 TARSL2A2RTX5 802 aaKnown RBP13.16□□□□□ -0.3
SPG11-203ENST00000535302 TRAPPC3O43617 180 aa13.16□□□□□ -0.3
SPG11-203ENST00000535302 PRKCQQ04759 706 aa13.16□□□□□ -0.3
SPG11-203ENST00000535302 KIF2CQ99661 725 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms