RNA–Protein interactions for RNA: ENST00000535170.5

ZKSCAN1-205, Transcript of zinc finger with KRAB and SCAN domains 1, humanhuman

TSL 2 BASIC

Gene ZKSCAN1, Length 8,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZKSCAN1-205ENST00000535170 NUP107P57740 925 aa11.69□□□□□ -0.54
ZKSCAN1-205ENST00000535170 CYP4Z1Q86W10 505 aa11.69□□□□□ -0.54
ZKSCAN1-205ENST00000535170 SLC22A9Q8IVM8 553 aa11.69□□□□□ -0.54
ZKSCAN1-205ENST00000535170 CNBD2Q96M20 576 aa11.69□□□□□ -0.54
ZKSCAN1-205ENST00000535170 RAVER2Q9HCJ3 691 aaKnown RBP11.69□□□□□ -0.54
ZKSCAN1-205ENST00000535170 KLHL11Q9NVR0 708 aa11.69□□□□□ -0.54
ZKSCAN1-205ENST00000535170 VTI1BQ9UEU0 232 aa11.69□□□□□ -0.54
ZKSCAN1-205ENST00000535170 ATP11BQ9Y2G3 1177 aa11.69□□□□□ -0.54
ZKSCAN1-205ENST00000535170 GGCXP38435 758 aa11.69□□□□□ -0.54
ZKSCAN1-205ENST00000535170 DHX40Q8IX18 779 aaKnown RBP11.69□□□□□ -0.54
ZKSCAN1-205ENST00000535170 PARP9Q8IXQ6 854 aa11.69□□□□□ -0.54
ZKSCAN1-205ENST00000535170 ZCCHC2Q9C0B9 1178 aaKnown RBP11.69□□□□□ -0.54
ZKSCAN1-205ENST00000535170 SMYD3Q9H7B4 428 aa11.69□□□□□ -0.54
ZKSCAN1-205ENST00000535170 CYP3A43Q9HB55 503 aa11.69□□□□□ -0.54
ZKSCAN1-205ENST00000535170 XPO7Q9UIA9 1087 aaKnown RBP11.69□□□□□ -0.54
ZKSCAN1-205ENST00000535170 GUCY1A3Q02108 690 aa11.69□□□□□ -0.54
ZKSCAN1-205ENST00000535170 PTPAQ15257 358 aa11.69□□□□□ -0.54
ZKSCAN1-205ENST00000535170 PTPROQ16827 1216 aa11.69□□□□□ -0.54
ZKSCAN1-205ENST00000535170 ZBTB41Q5SVQ8 909 aa11.69□□□□□ -0.54
ZKSCAN1-205ENST00000535170 PTRHD1Q6GMV3 140 aaKnown RBP11.69□□□□□ -0.54
ZKSCAN1-205ENST00000535170 HORMAD1Q86X24 394 aa11.69□□□□□ -0.54
ZKSCAN1-205ENST00000535170 SARS2Q9NP81 518 aaKnown RBP11.69□□□□□ -0.54
ZKSCAN1-205ENST00000535170 FNDC3AQ9Y2H6 1198 aaKnown RBP11.69□□□□□ -0.54
ZKSCAN1-205ENST00000535170 CHD4Q14839 1912 aa11.69□□□□□ -0.54
ZKSCAN1-205ENST00000535170 KCNK10P57789 538 aa11.69□□□□□ -0.54
ZKSCAN1-205ENST00000535170 SLC7A5Q01650 507 aa11.69□□□□□ -0.54
ZKSCAN1-205ENST00000535170 MRPS25P82663 173 aaKnown RBP11.69□□□□□ -0.54
ZKSCAN1-205ENST00000535170 KLC1Q07866 573 aa11.69□□□□□ -0.54
ZKSCAN1-205ENST00000535170 MAD2L1Q13257 205 aaPredicted RBP11.69□□□□□ -0.54
ZKSCAN1-205ENST00000535170 TERF2Q15554 542 aa11.69□□□□□ -0.54
ZKSCAN1-205ENST00000535170 LCA5Q86VQ0 697 aa11.69□□□□□ -0.54
ZKSCAN1-205ENST00000535170 UNC45BQ8IWX7 931 aa11.69□□□□□ -0.54
ZKSCAN1-205ENST00000535170 TFB1MQ8WVM0 346 aaKnown RBP11.69□□□□□ -0.54
ZKSCAN1-205ENST00000535170 SPON1Q9HCB6 807 aa11.69□□□□□ -0.54
ZKSCAN1-205ENST00000535170 WHRNQ9P202 907 aa11.69□□□□□ -0.54
ZKSCAN1-205ENST00000535170 MYH7P12883 1935 aa11.69□□□□□ -0.54
ZKSCAN1-205ENST00000535170 POLE2P56282 527 aa11.69□□□□□ -0.54
ZKSCAN1-205ENST00000535170 PLA2G4FQ68DD2 849 aa11.69□□□□□ -0.54
ZKSCAN1-205ENST00000535170 SPATA18Q8TC71 538 aa11.69□□□□□ -0.54
ZKSCAN1-205ENST00000535170 ZNF512Q96ME7 567 aaPredicted RBP11.69□□□□□ -0.54
ZKSCAN1-205ENST00000535170 RBM15Q96T37 977 aaKnown RBP eCLIP11.69□□□□□ -0.544e-8■■■□□ 14.9
ZKSCAN1-205ENST00000535170 ANTXR1Q9H6X2 564 aa11.69□□□□□ -0.54
ZKSCAN1-205ENST00000535170 STMN3Q9NZ72 180 aa11.69□□□□□ -0.54
ZKSCAN1-205ENST00000535170 TRPM5Q9NZQ8 1165 aa11.69□□□□□ -0.54
ZKSCAN1-205ENST00000535170 H3BMM5 538 aa11.68□□□□□ -0.54
ZKSCAN1-205ENST00000535170 MLNP12872 115 aa11.68□□□□□ -0.54
ZKSCAN1-205ENST00000535170 CAPZA2P47755 286 aa11.68□□□□□ -0.54
ZKSCAN1-205ENST00000535170 SPDYAQ5MJ70 313 aa11.68□□□□□ -0.54
ZKSCAN1-205ENST00000535170 DEPDC1Q5TB30 811 aa11.68□□□□□ -0.54
ZKSCAN1-205ENST00000535170 CDR2LQ86X02 465 aaPredicted RBP11.68□□□□□ -0.54
ZKSCAN1-205ENST00000535170 HERC6Q8IVU3 1022 aa11.68□□□□□ -0.54
ZKSCAN1-205ENST00000535170 VPS33AQ96AX1 596 aa11.68□□□□□ -0.54
ZKSCAN1-205ENST00000535170 TSPAN18Q96SJ8 248 aa11.68□□□□□ -0.54
ZKSCAN1-205ENST00000535170 NR2C2P49116 596 aa11.68□□□□□ -0.54
ZKSCAN1-205ENST00000535170 BRINP3Q76B58 766 aa11.68□□□□□ -0.54
ZKSCAN1-205ENST00000535170 TAB3Q8N5C8 712 aaPredicted RBP11.68□□□□□ -0.54
ZKSCAN1-205ENST00000535170 ASB2Q96Q27 587 aa11.68□□□□□ -0.54
ZKSCAN1-205ENST00000535170 SYTL2Q9HCH5 934 aa11.68□□□□□ -0.54
ZKSCAN1-205ENST00000535170 AHSPQ9NZD4 102 aa11.68□□□□□ -0.54
ZKSCAN1-205ENST00000535170 EIF3LQ9Y262 564 aaKnown RBP11.68□□□□□ -0.54
ZKSCAN1-205ENST00000535170 CARSP49589 748 aaKnown RBP11.68□□□□□ -0.54
ZKSCAN1-205ENST00000535170 NFE2Q16621 373 aaPredicted RBP11.68□□□□□ -0.54
ZKSCAN1-205ENST00000535170 USP17L6PQ6QN14 398 aa11.68□□□□□ -0.54
ZKSCAN1-205ENST00000535170 PASD1Q8IV76 773 aa11.68□□□□□ -0.54
ZKSCAN1-205ENST00000535170 ANKRD13AQ8IZ07 590 aa11.68□□□□□ -0.54
ZKSCAN1-205ENST00000535170 ST13P5Q8NFI4 369 aaPredicted RBP11.68□□□□□ -0.54
ZKSCAN1-205ENST00000535170 RMND5BQ96G75 393 aaPredicted RBP11.68□□□□□ -0.54
ZKSCAN1-205ENST00000535170 FAM161BQ96MY7 647 aa11.68□□□□□ -0.54
ZKSCAN1-205ENST00000535170 HEATR9A2RTY3 570 aa11.68□□□□□ -0.54
ZKSCAN1-205ENST00000535170 EIF3HO15372 352 aaKnown RBP eCLIP11.68□□□□□ -0.542e-7■■■■■ 28.1
ZKSCAN1-205ENST00000535170 TMEM253P0C7T8 217 aa11.68□□□□□ -0.54
ZKSCAN1-205ENST00000535170 LHX1P48742 406 aa11.68□□□□□ -0.54
ZKSCAN1-205ENST00000535170 CREMQ03060 361 aa11.68□□□□□ -0.54
ZKSCAN1-205ENST00000535170 VPS51Q9UID3 782 aa11.68□□□□□ -0.54
ZKSCAN1-205ENST00000535170 UBQLN1Q9UMX0 589 aaKnown RBP11.68□□□□□ -0.54
ZKSCAN1-205ENST00000535170 BNIP3LO60238 219 aa11.68□□□□□ -0.54
ZKSCAN1-205ENST00000535170 VPS4BO75351 444 aa11.68□□□□□ -0.54
ZKSCAN1-205ENST00000535170 GZMAP12544 262 aa11.68□□□□□ -0.54
ZKSCAN1-205ENST00000535170 TAF6P49848 677 aa11.68□□□□□ -0.54
ZKSCAN1-205ENST00000535170 EMC2Q15006 297 aa11.68□□□□□ -0.54
ZKSCAN1-205ENST00000535170 ATF7IP2Q5U623 682 aa11.68□□□□□ -0.54
ZKSCAN1-205ENST00000535170 METTL3Q86U44 580 aaKnown RBP11.68□□□□□ -0.54
ZKSCAN1-205ENST00000535170 GRAMD1CQ8IYS0 662 aa11.68□□□□□ -0.54
ZKSCAN1-205ENST00000535170 MRPS26Q9BYN8 205 aaKnown RBP11.68□□□□□ -0.54
ZKSCAN1-205ENST00000535170 MAF1Q9H063 256 aa11.68□□□□□ -0.54
ZKSCAN1-205ENST00000535170 CTNNAL1Q9UBT7 734 aa11.68□□□□□ -0.54
ZKSCAN1-205ENST00000535170 SLC25A13Q9UJS0 675 aa11.68□□□□□ -0.54
ZKSCAN1-205ENST00000535170 FHOD1Q9Y613 1164 aa11.68□□□□□ -0.54
ZKSCAN1-205ENST00000535170 RPSAP08865 295 aaKnown RBP11.68□□□□□ -0.54
ZKSCAN1-205ENST00000535170 PDGFRAP16234 1089 aa11.68□□□□□ -0.54
ZKSCAN1-205ENST00000535170 ALDH7A1P49419 539 aaKnown RBP11.68□□□□□ -0.54
ZKSCAN1-205ENST00000535170 MRPS35P82673 323 aaKnown RBP11.68□□□□□ -0.54
ZKSCAN1-205ENST00000535170 MCL1Q07820 350 aa11.68□□□□□ -0.54
ZKSCAN1-205ENST00000535170 TRIP4Q15650 581 aaPredicted RBP11.68□□□□□ -0.54
ZKSCAN1-205ENST00000535170 CASP10Q92851 521 aa11.68□□□□□ -0.54
ZKSCAN1-205ENST00000535170 NUDT12Q9BQG2 462 aa11.68□□□□□ -0.54
ZKSCAN1-205ENST00000535170 RAD18Q9NS91 495 aa11.68□□□□□ -0.54
ZKSCAN1-205ENST00000535170 NEU2Q9Y3R4 380 aa11.68□□□□□ -0.54
ZKSCAN1-205ENST00000535170 GSG1L2A8MUP6 293 aa11.67□□□□□ -0.54
ZKSCAN1-205ENST00000535170 RPS6KA5O75582 802 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms