RNA–Protein interactions for RNA: ENST00000534885.5

TNFRSF1A-205, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best)

Gene TNFRSF1A, Length 2,069 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-205ENST00000534885 PTPROQ16827 1216 aa21.59■■□□□ 1.05
TNFRSF1A-205ENST00000534885 PAN2Q504Q3 1202 aaKnown RBP21.59■■□□□ 1.05
TNFRSF1A-205ENST00000534885 SGO2Q562F6 1265 aa21.59■■□□□ 1.05
TNFRSF1A-205ENST00000534885 PAPD7Q5XG87 772 aaKnown RBP21.59■■□□□ 1.05
TNFRSF1A-205ENST00000534885 MMS22LQ6ZRQ5 1243 aa21.59■■□□□ 1.05
TNFRSF1A-205ENST00000534885 PHLDB2Q86SQ0 1253 aa21.59■■□□□ 1.05
TNFRSF1A-205ENST00000534885 ADGRF2Q8IZF7 708 aa21.59■■□□□ 1.05
TNFRSF1A-205ENST00000534885 APBB2Q92870 758 aa21.59■■□□□ 1.05
TNFRSF1A-205ENST00000534885 TMEM39AQ9NV64 488 aa21.59■■□□□ 1.05
TNFRSF1A-205ENST00000534885 WDR3Q9UNX4 943 aaKnown RBP eCLIP21.59■■□□□ 1.05
TNFRSF1A-205ENST00000534885 GTF3C5Q9Y5Q8 519 aaPredicted RBP21.59■■□□□ 1.05
TNFRSF1A-205ENST00000534885 TTC3P53804 2025 aa21.59■■□□□ 1.05
TNFRSF1A-205ENST00000534885 BUB1BO60566 1050 aaPredicted RBP21.59■■□□□ 1.05
TNFRSF1A-205ENST00000534885 PDGFRBP09619 1106 aa21.59■■□□□ 1.05
TNFRSF1A-205ENST00000534885 RRM1P23921 792 aa21.59■■□□□ 1.05
TNFRSF1A-205ENST00000534885 CDH5P33151 784 aaPredicted RBP21.59■■□□□ 1.05
TNFRSF1A-205ENST00000534885 PTP4A2Q12974 167 aa21.59■■□□□ 1.05
TNFRSF1A-205ENST00000534885 UNC93AQ86WB7 457 aa21.59■■□□□ 1.05
TNFRSF1A-205ENST00000534885 PHF13Q86YI8 300 aaPredicted RBP21.59■■□□□ 1.05
TNFRSF1A-205ENST00000534885 TOP6BLQ8N6T0 577 aa21.59■■□□□ 1.05
TNFRSF1A-205ENST00000534885 TMEM35BQ8NCS4 154 aa21.59■■□□□ 1.05
TNFRSF1A-205ENST00000534885 SENP8Q96LD8 212 aa21.59■■□□□ 1.05
TNFRSF1A-205ENST00000534885 LPIN3Q9BQK8 851 aa21.59■■□□□ 1.05
TNFRSF1A-205ENST00000534885 NUP85Q9BW27 656 aa21.59■■□□□ 1.05
TNFRSF1A-205ENST00000534885 TLR10Q9BXR5 811 aa21.59■■□□□ 1.05
TNFRSF1A-205ENST00000534885 ADAM22Q9P0K1 906 aa21.59■■□□□ 1.05
TNFRSF1A-205ENST00000534885 PACSIN2Q9UNF0 486 aaPredicted RBP21.59■■□□□ 1.05
TNFRSF1A-205ENST00000534885 MICAL2O94851 1124 aa21.58■■□□□ 1.05
TNFRSF1A-205ENST00000534885 CLTBP09497 229 aa21.58■■□□□ 1.05
TNFRSF1A-205ENST00000534885 GNL1P36915 607 aaPredicted RBP21.58■■□□□ 1.05
TNFRSF1A-205ENST00000534885 TCEAL1Q15170 157 aa21.58■■□□□ 1.05
TNFRSF1A-205ENST00000534885 NOMO2Q5JPE7 1267 aa21.58■■□□□ 1.05
TNFRSF1A-205ENST00000534885 WSCD1Q658N2 575 aa21.58■■□□□ 1.05
TNFRSF1A-205ENST00000534885 OSTM1Q86WC4 334 aa21.58■■□□□ 1.05
TNFRSF1A-205ENST00000534885 ZNF280BQ86YH2 543 aa21.58■■□□□ 1.05
TNFRSF1A-205ENST00000534885 FAM49BQ9NUQ9 324 aa21.58■■□□□ 1.05
TNFRSF1A-205ENST00000534885 CYTH4Q9UIA0 394 aa21.58■■□□□ 1.05
TNFRSF1A-205ENST00000534885 STXBP5LQ9Y2K9 1186 aa21.58■■□□□ 1.05
TNFRSF1A-205ENST00000534885 LOC101059915A0A1B0GWI6 518 aaPredicted RBP21.57■■□□□ 1.04
TNFRSF1A-205ENST00000534885 SRGAP2O75044 1071 aa21.57■■□□□ 1.04
TNFRSF1A-205ENST00000534885 B3GAT3O94766 335 aa21.57■■□□□ 1.04
TNFRSF1A-205ENST00000534885 MMP8P22894 467 aa21.57■■□□□ 1.04
TNFRSF1A-205ENST00000534885 HADHBP55084 474 aaKnown RBP21.57■■□□□ 1.04
TNFRSF1A-205ENST00000534885 CNGA2Q16280 664 aa21.57■■□□□ 1.04
TNFRSF1A-205ENST00000534885 DAAM2Q86T65 1068 aa21.57■■□□□ 1.04
TNFRSF1A-205ENST00000534885 HASPINQ8TF76 798 aa21.57■■□□□ 1.04
TNFRSF1A-205ENST00000534885 TMEM106CQ9BVX2 250 aa21.57■■□□□ 1.04
TNFRSF1A-205ENST00000534885 ZNF518BQ9C0D4 1074 aa21.57■■□□□ 1.04
TNFRSF1A-205ENST00000534885 LHX5Q9H2C1 402 aa21.57■■□□□ 1.04
TNFRSF1A-205ENST00000534885 SNX25Q9H3E2 840 aa21.57■■□□□ 1.04
TNFRSF1A-205ENST00000534885 CEP83Q9Y592 693 aa21.57■■□□□ 1.04
TNFRSF1A-205ENST00000534885 MICAL3Q7RTP6 2002 aa21.57■■□□□ 1.04
TNFRSF1A-205ENST00000534885 F8W810 466 aa21.57■■□□□ 1.04
TNFRSF1A-205ENST00000534885 DDHD2O94830 711 aa21.57■■□□□ 1.04
TNFRSF1A-205ENST00000534885 PARNO95453 639 aaKnown RBP21.57■■□□□ 1.04
TNFRSF1A-205ENST00000534885 AARSP49588 968 aaKnown RBP eCLIP21.57■■□□□ 1.04
TNFRSF1A-205ENST00000534885 PPP1R26Q5T8A7 1209 aaPredicted RBP21.57■■□□□ 1.04
TNFRSF1A-205ENST00000534885 SLFN11Q7Z7L1 901 aa21.57■■□□□ 1.04
TNFRSF1A-205ENST00000534885 ZNF564Q8TBZ8 553 aaPredicted RBP21.57■■□□□ 1.04
TNFRSF1A-205ENST00000534885 PSMB7Q99436 277 aa21.57■■□□□ 1.04
TNFRSF1A-205ENST00000534885 ELAC1Q9H777 363 aaKnown RBP21.57■■□□□ 1.04
TNFRSF1A-205ENST00000534885 PCDH10Q9P2E7 1040 aa21.57■■□□□ 1.04
TNFRSF1A-205ENST00000534885 CDC23Q9UJX2 597 aa21.57■■□□□ 1.04
TNFRSF1A-205ENST00000534885 TSPAN16Q9UKR8 245 aa21.57■■□□□ 1.04
TNFRSF1A-205ENST00000534885 KIAA1257Q9ULG3 409 aa21.57■■□□□ 1.04
TNFRSF1A-205ENST00000534885 SAR1BQ9Y6B6 198 aa21.57■■□□□ 1.04
TNFRSF1A-205ENST00000534885 I3L4J1 428 aa21.56■■□□□ 1.04
TNFRSF1A-205ENST00000534885 M0QYV0 167 aa21.56■■□□□ 1.04
TNFRSF1A-205ENST00000534885 MYBL1P10243 752 aa21.56■■□□□ 1.04
TNFRSF1A-205ENST00000534885 WARSP23381 471 aaKnown RBP21.56■■□□□ 1.04
TNFRSF1A-205ENST00000534885 C1QBPQ07021 282 aaKnown RBP21.56■■□□□ 1.04
TNFRSF1A-205ENST00000534885 TIGD5Q53EQ6 642 aa21.56■■□□□ 1.04
TNFRSF1A-205ENST00000534885 MEI1Q5TIA1 1274 aa21.56■■□□□ 1.04
TNFRSF1A-205ENST00000534885 CD300LGQ6UXG3 332 aa21.56■■□□□ 1.04
TNFRSF1A-205ENST00000534885 NECAB2Q7Z6G3 386 aa21.56■■□□□ 1.04
TNFRSF1A-205ENST00000534885 VWCEQ96DN2 955 aa21.56■■□□□ 1.04
TNFRSF1A-205ENST00000534885 TRIM11Q96F44 468 aa21.56■■□□□ 1.04
TNFRSF1A-205ENST00000534885 DDX27Q96GQ7 796 aaKnown RBP21.56■■□□□ 1.04
TNFRSF1A-205ENST00000534885 VCPIP1Q96JH7 1222 aa21.56■■□□□ 1.04
TNFRSF1A-205ENST00000534885 AVENQ9NQS1 362 aaPredicted RBP21.56■■□□□ 1.04
TNFRSF1A-205ENST00000534885 TBC1D13Q9NVG8 400 aa21.56■■□□□ 1.04
TNFRSF1A-205ENST00000534885 HYOU1Q9Y4L1 999 aa21.56■■□□□ 1.04
TNFRSF1A-205ENST00000534885 PCDHB7Q9Y5E2 793 aa21.56■■□□□ 1.04
TNFRSF1A-205ENST00000534885 TIMM13Q9Y5L4 95 aaPredicted RBP21.56■■□□□ 1.04
TNFRSF1A-205ENST00000534885 MTA2O94776 668 aa21.56■■□□□ 1.04
TNFRSF1A-205ENST00000534885 ITGB1P05556 798 aa21.56■■□□□ 1.04
TNFRSF1A-205ENST00000534885 GATMP50440 423 aa21.56■■□□□ 1.04
TNFRSF1A-205ENST00000534885 DSC1Q08554 894 aa21.56■■□□□ 1.04
TNFRSF1A-205ENST00000534885 LCLAT1Q6UWP7 414 aa21.56■■□□□ 1.04
TNFRSF1A-205ENST00000534885 DSTYKQ6XUX3 929 aa21.56■■□□□ 1.04
TNFRSF1A-205ENST00000534885 LRRN4CLQ8ND94 238 aa21.56■■□□□ 1.04
TNFRSF1A-205ENST00000534885 MYRIPQ8NFW9 859 aa21.56■■□□□ 1.04
TNFRSF1A-205ENST00000534885 UBA3Q8TBC4 463 aa21.56■■□□□ 1.04
TNFRSF1A-205ENST00000534885 URGCPQ8TCY9 931 aa21.56■■□□□ 1.04
TNFRSF1A-205ENST00000534885 BTBD6Q96KE9 485 aa21.56■■□□□ 1.04
TNFRSF1A-205ENST00000534885 SNX12Q9UMY4 172 aa21.56■■□□□ 1.04
TNFRSF1A-205ENST00000534885 BRCC3P46736 316 aa21.55■■□□□ 1.04
TNFRSF1A-205ENST00000534885 DNA2P51530 1060 aa21.55■■□□□ 1.04
TNFRSF1A-205ENST00000534885 PTPN20Q4JDL3 420 aa21.55■■□□□ 1.04
TNFRSF1A-205ENST00000534885 PPP1R2P3Q6NXS1 205 aa21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms