RNA–Protein interactions for RNA: ENST00000534049.5

ITGB1-219, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-219ENST00000534049 HDAC1Q13547 482 aaPredicted RBP5.02□□□□□ -1.61
ITGB1-219ENST00000534049 ZNF169Q14929 603 aaPredicted RBP5.02□□□□□ -1.61
ITGB1-219ENST00000534049 PTPN21Q16825 1174 aa5.02□□□□□ -1.61
ITGB1-219ENST00000534049 SYCE2Q6PIF2 218 aa5.02□□□□□ -1.61
ITGB1-219ENST00000534049 TSHZ1Q6ZSZ6 1077 aa5.02□□□□□ -1.61
ITGB1-219ENST00000534049 PDSS2Q86YH6 399 aa5.02□□□□□ -1.61
ITGB1-219ENST00000534049 EXOC8Q8IYI6 725 aa5.02□□□□□ -1.61
ITGB1-219ENST00000534049 DCBLD1Q8N8Z6 715 aa5.02□□□□□ -1.61
ITGB1-219ENST00000534049 NACC2Q96BF6 587 aa5.02□□□□□ -1.61
ITGB1-219ENST00000534049 ZNF764Q96H86 408 aaPredicted RBP5.02□□□□□ -1.61
ITGB1-219ENST00000534049 CLPTM1LQ96KA5 538 aa5.02□□□□□ -1.61
ITGB1-219ENST00000534049 MYCBPQ99417 103 aaPredicted RBP5.02□□□□□ -1.61
ITGB1-219ENST00000534049 PAIP2Q9BPZ3 127 aaKnown RBP5.02□□□□□ -1.61
ITGB1-219ENST00000534049 SIK2Q9H0K1 926 aa5.02□□□□□ -1.61
ITGB1-219ENST00000534049 INTS13Q9NVM9 706 aa5.02□□□□□ -1.61
ITGB1-219ENST00000534049 HSFX1Q9UBD0 423 aa5.02□□□□□ -1.61
ITGB1-219ENST00000534049 FEZ2Q9UHY8 353 aaPredicted RBP5.02□□□□□ -1.61
ITGB1-219ENST00000534049 LIMCH1Q9UPQ0 1083 aa5.02□□□□□ -1.61
ITGB1-219ENST00000534049 KIF3AQ9Y496 699 aa5.02□□□□□ -1.61
ITGB1-219ENST00000534049 CEP83Q9Y592 693 aa5.02□□□□□ -1.61
ITGB1-219ENST00000534049 PCDHGA9Q9Y5G4 932 aaKnown RBP5.02□□□□□ -1.61
ITGB1-219ENST00000534049 PCDHGA8Q9Y5G5 932 aa5.02□□□□□ -1.61
ITGB1-219ENST00000534049 PCDHGA7Q9Y5G6 932 aa5.02□□□□□ -1.61
ITGB1-219ENST00000534049 PCDHGA6Q9Y5G7 932 aa5.02□□□□□ -1.61
ITGB1-219ENST00000534049 PCDHGA3Q9Y5H0 932 aa5.02□□□□□ -1.61
ITGB1-219ENST00000534049 COL4A3BPQ9Y5P4 624 aa5.02□□□□□ -1.61
ITGB1-219ENST00000534049 MROH2AA6NES4 1674 aa5.02□□□□□ -1.61
ITGB1-219ENST00000534049 MBD5Q9P267 1494 aa5.01□□□□□ -1.61
ITGB1-219ENST00000534049 KIAA1107Q9UPP5 1409 aa5.01□□□□□ -1.61
ITGB1-219ENST00000534049 CCDC195A0A1B0GUA6 201 aa5.01□□□□□ -1.61
ITGB1-219ENST00000534049 SLC16A6O15403 523 aa5.01□□□□□ -1.61
ITGB1-219ENST00000534049 OFD1O75665 1012 aa5.01□□□□□ -1.61
ITGB1-219ENST00000534049 AGFG2O95081 481 aa5.01□□□□□ -1.61
ITGB1-219ENST00000534049 GNAI3P08754 354 aa5.01□□□□□ -1.61
ITGB1-219ENST00000534049 RECQLP46063 649 aaPredicted RBP5.01□□□□□ -1.61
ITGB1-219ENST00000534049 GNAI1P63096 354 aa5.01□□□□□ -1.61
ITGB1-219ENST00000534049 POU6F2P78424 691 aaPredicted RBP5.01□□□□□ -1.61
ITGB1-219ENST00000534049 GEN1Q17RS7 908 aa5.01□□□□□ -1.61
ITGB1-219ENST00000534049 UAP1L1Q3KQV9 507 aa5.01□□□□□ -1.61
ITGB1-219ENST00000534049 RD3Q7Z3Z2 195 aa5.01□□□□□ -1.61
ITGB1-219ENST00000534049 SIMC1Q8NDZ2 872 aa5.01□□□□□ -1.61
ITGB1-219ENST00000534049 ACTRT2Q8TDY3 377 aa5.01□□□□□ -1.61
ITGB1-219ENST00000534049 NSUN6Q8TEA1 469 aaKnown RBP5.01□□□□□ -1.61
ITGB1-219ENST00000534049 FAM210AQ96ND0 272 aa5.01□□□□□ -1.61
ITGB1-219ENST00000534049 NINLQ9Y2I6 1382 aa5.01□□□□□ -1.61
ITGB1-219ENST00000534049 STRCQ7RTU9 1775 aa5.01□□□□□ -1.61
ITGB1-219ENST00000534049 NCOA1Q15788 1441 aa5□□□□□ -1.61
ITGB1-219ENST00000534049 UHRF1BP1Q6BDS2 1440 aa5□□□□□ -1.61
ITGB1-219ENST00000534049 ADGBQ8N7X0 1667 aa5□□□□□ -1.61
ITGB1-219ENST00000534049 PROM1O43490 865 aa5□□□□□ -1.61
ITGB1-219ENST00000534049 CHEK2O96017 543 aa5□□□□□ -1.61
ITGB1-219ENST00000534049 C1RP00736 705 aa5□□□□□ -1.61
ITGB1-219ENST00000534049 IBSPP21815 317 aaPredicted RBP5□□□□□ -1.61
ITGB1-219ENST00000534049 SMARCA1P28370 1054 aa5□□□□□ -1.61
ITGB1-219ENST00000534049 FOLR3P41439 243 aa5□□□□□ -1.61
ITGB1-219ENST00000534049 RARRES1P49788 294 aa5□□□□□ -1.61
ITGB1-219ENST00000534049 ANXA11P50995 505 aaKnown RBP5□□□□□ -1.61
ITGB1-219ENST00000534049 CACNA2D1P54289 1103 aa5□□□□□ -1.61
ITGB1-219ENST00000534049 HSPA2P54652 639 aa5□□□□□ -1.61
ITGB1-219ENST00000534049 HLXQ14774 488 aaPredicted RBP5□□□□□ -1.61
ITGB1-219ENST00000534049 PCBP2Q15366 365 aaKnown RBP eCLIP5□□□□□ -1.613e-8■■■□□ 18.9
ITGB1-219ENST00000534049 C3orf36Q3SXR2 165 aa5□□□□□ -1.61
ITGB1-219ENST00000534049 PREPLQ4J6C6 727 aaPredicted RBP5□□□□□ -1.61
ITGB1-219ENST00000534049 TMTC2Q8N394 836 aa5□□□□□ -1.61
ITGB1-219ENST00000534049 AFAP1Q8N556 730 aa5□□□□□ -1.61
ITGB1-219ENST00000534049 Q8NA96 180 aa5□□□□□ -1.61
ITGB1-219ENST00000534049 SSH3Q8TE77 659 aa5□□□□□ -1.61
ITGB1-219ENST00000534049 BBC3Q96PG8 261 aaPredicted RBP5□□□□□ -1.61
ITGB1-219ENST00000534049 CCDC8Q9H0W5 538 aaPredicted RBP5□□□□□ -1.61
ITGB1-219ENST00000534049 PCDH12Q9NPG4 1184 aa5□□□□□ -1.61
ITGB1-219ENST00000534049 CFAP97Q9P2B7 532 aa5□□□□□ -1.61
ITGB1-219ENST00000534049 SLC17A6Q9P2U8 582 aa5□□□□□ -1.61
ITGB1-219ENST00000534049 CDYLQ9Y232 598 aa5□□□□□ -1.61
ITGB1-219ENST00000534049 KNSTRNQ9Y448 316 aa5□□□□□ -1.61
ITGB1-219ENST00000534049 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5□□□□□ -1.615e-6■■■■■ 39.1
ITGB1-219ENST00000534049 CAMSAP2Q08AD1 1489 aa5□□□□□ -1.61
ITGB1-219ENST00000534049 PLEKHH2Q8IVE3 1493 aa5□□□□□ -1.61
ITGB1-219ENST00000534049 ZBED9Q6R2W3 1325 aa4.99□□□□□ -1.61
ITGB1-219ENST00000534049 NPATQ14207 1427 aa4.99□□□□□ -1.61
ITGB1-219ENST00000534049 CNTLNQ9NXG0 1405 aa4.99□□□□□ -1.61
ITGB1-219ENST00000534049 CCDC78A2IDD5 438 aa4.99□□□□□ -1.61
ITGB1-219ENST00000534049 MPPED1O15442 326 aa4.99□□□□□ -1.61
ITGB1-219ENST00000534049 ZNF500O60304 480 aaPredicted RBP4.99□□□□□ -1.61
ITGB1-219ENST00000534049 SOAT2O75908 522 aa4.99□□□□□ -1.61
ITGB1-219ENST00000534049 SNUPNO95149 360 aaKnown RBP4.99□□□□□ -1.61
ITGB1-219ENST00000534049 CCDC172P0C7W6 258 aa4.99□□□□□ -1.61
ITGB1-219ENST00000534049 VCAM1P19320 739 aa4.99□□□□□ -1.61
ITGB1-219ENST00000534049 EDNRBP24530 442 aa4.99□□□□□ -1.61
ITGB1-219ENST00000534049 SLC6A4P31645 630 aa4.99□□□□□ -1.61
ITGB1-219ENST00000534049 CLK3P49761 638 aaKnown RBP4.99□□□□□ -1.61
ITGB1-219ENST00000534049 FXR1P51114 621 aaKnown RBP eCLIP4.99□□□□□ -1.61
ITGB1-219ENST00000534049 ZNF280AP59817 542 aaPredicted RBP4.99□□□□□ -1.61
ITGB1-219ENST00000534049 FPGSQ05932 587 aa4.99□□□□□ -1.61
ITGB1-219ENST00000534049 IL10RAQ13651 578 aa4.99□□□□□ -1.61
ITGB1-219ENST00000534049 FAM50AQ14320 339 aaKnown RBP4.99□□□□□ -1.61
ITGB1-219ENST00000534049 CCDC142Q17RM4 750 aa4.99□□□□□ -1.61
ITGB1-219ENST00000534049 TMEM240Q5SV17 173 aa4.99□□□□□ -1.61
ITGB1-219ENST00000534049 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.99□□□□□ -1.61
ITGB1-219ENST00000534049 RINLQ6ZS11 566 aa4.99□□□□□ -1.61
ITGB1-219ENST00000534049 GRASPQ7Z6J2 395 aaPredicted RBP4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms