RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 STYK1Q6J9G0 422 aa20.38■□□□□ 0.85
CAPN1-226ENST00000533820 LRRC8CQ8TDW0 803 aa20.38■□□□□ 0.85
CAPN1-226ENST00000533820 TMEM174Q8WUU8 243 aa20.38■□□□□ 0.85
CAPN1-226ENST00000533820 KIAA1683Q9H0B3 1180 aa20.38■□□□□ 0.85
CAPN1-226ENST00000533820 EXTL3O43909 919 aa20.38■□□□□ 0.85
CAPN1-226ENST00000533820 PLA2G6O60733 806 aa20.38■□□□□ 0.85
CAPN1-226ENST00000533820 C4BPAP04003 597 aaKnown RBP20.38■□□□□ 0.85
CAPN1-226ENST00000533820 FGFR1P11362 822 aa20.38■□□□□ 0.85
CAPN1-226ENST00000533820 GTF2H1P32780 548 aa20.38■□□□□ 0.85
CAPN1-226ENST00000533820 POLGP54098 1239 aaPredicted RBP20.38■□□□□ 0.85
CAPN1-226ENST00000533820 NRLP54845 237 aa20.38■□□□□ 0.85
CAPN1-226ENST00000533820 EXD1Q8NHP7 514 aa20.38■□□□□ 0.85
CAPN1-226ENST00000533820 TIPINQ9BVW5 301 aa20.38■□□□□ 0.85
CAPN1-226ENST00000533820 RPAP3Q9H6T3 665 aaPredicted RBP20.38■□□□□ 0.85
CAPN1-226ENST00000533820 ZWILCHQ9H900 591 aa20.38■□□□□ 0.85
CAPN1-226ENST00000533820 CYP26B1Q9NR63 512 aa20.38■□□□□ 0.85
CAPN1-226ENST00000533820 CETN2P41208 172 aa20.37■□□□□ 0.85
CAPN1-226ENST00000533820 OGDHQ02218 1023 aa20.37■□□□□ 0.85
CAPN1-226ENST00000533820 SPARCL1Q14515 664 aa20.37■□□□□ 0.85
CAPN1-226ENST00000533820 ZBTB33Q86T24 672 aa20.37■□□□□ 0.85
CAPN1-226ENST00000533820 BBOF1Q8ND07 529 aa20.37■□□□□ 0.85
CAPN1-226ENST00000533820 SENP7Q9BQF6 1050 aa20.37■□□□□ 0.85
CAPN1-226ENST00000533820 NPHS2Q9NP85 383 aa20.37■□□□□ 0.85
CAPN1-226ENST00000533820 FBXO40Q9UH90 709 aa20.37■□□□□ 0.85
CAPN1-226ENST00000533820 KAT6AQ92794 2004 aa20.37■□□□□ 0.85
CAPN1-226ENST00000533820 DNALI1O14645 258 aaPredicted RBP20.37■□□□□ 0.85
CAPN1-226ENST00000533820 KRT4P19013 534 aa20.37■□□□□ 0.85
CAPN1-226ENST00000533820 C15orf39Q6ZRI6 1047 aa20.37■□□□□ 0.85
CAPN1-226ENST00000533820 ZNF606Q8WXB4 792 aa20.37■□□□□ 0.85
CAPN1-226ENST00000533820 ATP6V0A1Q93050 837 aa20.37■□□□□ 0.85
CAPN1-226ENST00000533820 ZNF668Q96K58 619 aaPredicted RBP20.37■□□□□ 0.85
CAPN1-226ENST00000533820 SLITRK1Q96PX8 696 aa20.37■□□□□ 0.85
CAPN1-226ENST00000533820 NTPCRQ9BSD7 190 aaKnown RBP20.37■□□□□ 0.85
CAPN1-226ENST00000533820 MSTO1Q9BUK6 570 aa20.37■□□□□ 0.85
CAPN1-226ENST00000533820 MAK16Q9BXY0 300 aaKnown RBP20.37■□□□□ 0.85
CAPN1-226ENST00000533820 ZBED4O75132 1171 aa20.36■□□□□ 0.85
CAPN1-226ENST00000533820 TCEA3O75764 348 aa20.36■□□□□ 0.85
CAPN1-226ENST00000533820 FESP07332 822 aa20.36■□□□□ 0.85
CAPN1-226ENST00000533820 CCND1P24385 295 aa20.36■□□□□ 0.85
CAPN1-226ENST00000533820 MKRN3Q13064 507 aaKnown RBP20.36■□□□□ 0.85
CAPN1-226ENST00000533820 LVRNQ6Q4G3 990 aa20.36■□□□□ 0.85
CAPN1-226ENST00000533820 SAMD3Q8N6K7 520 aa20.36■□□□□ 0.85
CAPN1-226ENST00000533820 PIDD1Q9HB75 910 aa20.36■□□□□ 0.85
CAPN1-226ENST00000533820 EURLQ9NYK6 297 aa20.36■□□□□ 0.85
CAPN1-226ENST00000533820 AHCYL1O43865 530 aa20.36■□□□□ 0.85
CAPN1-226ENST00000533820 GARTP22102 1010 aa20.36■□□□□ 0.85
CAPN1-226ENST00000533820 TPP2P29144 1249 aaPredicted RBP20.36■□□□□ 0.85
CAPN1-226ENST00000533820 ZNF252P-AS1Q0IIN9 211 aa20.36■□□□□ 0.85
CAPN1-226ENST00000533820 RNF43Q68DV7 783 aa20.36■□□□□ 0.85
CAPN1-226ENST00000533820 ARMCX6Q7L4S7 300 aa20.36■□□□□ 0.85
CAPN1-226ENST00000533820 WDR46O15213 610 aaKnown RBP20.35■□□□□ 0.85
CAPN1-226ENST00000533820 EGFRP00533 1210 aa20.35■□□□□ 0.85
CAPN1-226ENST00000533820 CST3P01034 146 aaPredicted RBP20.35■□□□□ 0.85
CAPN1-226ENST00000533820 ATP2A2P16615 1042 aaKnown RBP20.35■□□□□ 0.85
CAPN1-226ENST00000533820 EPHB2P29323 1055 aa20.35■□□□□ 0.85
CAPN1-226ENST00000533820 TFDP1Q14186 410 aa20.35■□□□□ 0.85
CAPN1-226ENST00000533820 PLEKHA7Q6IQ23 1121 aa20.35■□□□□ 0.85
CAPN1-226ENST00000533820 NCAPG2Q86XI2 1143 aa20.35■□□□□ 0.85
CAPN1-226ENST00000533820 TCHPQ9BT92 498 aa20.35■□□□□ 0.85
CAPN1-226ENST00000533820 PARVAQ9NVD7 372 aa20.35■□□□□ 0.85
CAPN1-226ENST00000533820 ZMYND8Q9ULU4 1186 aaPredicted RBP20.35■□□□□ 0.85
CAPN1-226ENST00000533820 TTLL13PA6NNM8 815 aa20.35■□□□□ 0.85
CAPN1-226ENST00000533820 K7ERI5 159 aa20.35■□□□□ 0.85
CAPN1-226ENST00000533820 DGAT1O75907 488 aa20.35■□□□□ 0.85
CAPN1-226ENST00000533820 WEE2P0C1S8 567 aa20.35■□□□□ 0.85
CAPN1-226ENST00000533820 WDR72Q3MJ13 1102 aa20.35■□□□□ 0.85
CAPN1-226ENST00000533820 CCHCR1Q8TD31 782 aa20.35■□□□□ 0.85
CAPN1-226ENST00000533820 ASAP3Q8TDY4 903 aa20.35■□□□□ 0.85
CAPN1-226ENST00000533820 CORO1CQ9ULV4 474 aaPredicted RBP20.35■□□□□ 0.85
CAPN1-226ENST00000533820 RGS20O76081 388 aa20.35■□□□□ 0.85
CAPN1-226ENST00000533820 TJP3O95049 919 aa20.35■□□□□ 0.85
CAPN1-226ENST00000533820 EDN1P05305 212 aa20.35■□□□□ 0.85
CAPN1-226ENST00000533820 ALADP13716 330 aa20.35■□□□□ 0.85
CAPN1-226ENST00000533820 ADRA1DP25100 572 aa20.35■□□□□ 0.85
CAPN1-226ENST00000533820 ACTR2P61160 394 aa20.35■□□□□ 0.85
CAPN1-226ENST00000533820 ORC1Q13415 861 aa20.35■□□□□ 0.85
CAPN1-226ENST00000533820 PSMD6Q15008 389 aa20.35■□□□□ 0.85
CAPN1-226ENST00000533820 SEPT7Q16181 437 aaKnown RBP20.35■□□□□ 0.85
CAPN1-226ENST00000533820 ANKRD20A2Q5SQ80 823 aa20.35■□□□□ 0.85
CAPN1-226ENST00000533820 ANKRD20A1Q5TYW2 823 aa20.35■□□□□ 0.85
CAPN1-226ENST00000533820 ANKRD20A3Q5VUR7 823 aa20.35■□□□□ 0.85
CAPN1-226ENST00000533820 ANKRD22Q5VYY1 191 aa20.35■□□□□ 0.85
CAPN1-226ENST00000533820 DNAJC24Q6P3W2 148 aa20.35■□□□□ 0.85
CAPN1-226ENST00000533820 SPOCD1Q6ZMY3 1216 aa20.35■□□□□ 0.85
CAPN1-226ENST00000533820 ZNF677Q86XU0 584 aa20.35■□□□□ 0.85
CAPN1-226ENST00000533820 DEFB129Q9H1M3 183 aa20.35■□□□□ 0.85
CAPN1-226ENST00000533820 UBN1Q9NPG3 1134 aa20.35■□□□□ 0.85
CAPN1-226ENST00000533820 WNT10BO00744 389 aa20.34■□□□□ 0.85
CAPN1-226ENST00000533820 CTCFP49711 727 aaPredicted RBP20.34■□□□□ 0.85
CAPN1-226ENST00000533820 GDF10P55107 478 aa20.34■□□□□ 0.85
CAPN1-226ENST00000533820 NCOA4Q13772 614 aa20.34■□□□□ 0.85
CAPN1-226ENST00000533820 TMEM130Q8N3G9 435 aa20.34■□□□□ 0.85
CAPN1-226ENST00000533820 MCPH1Q8NEM0 835 aa20.34■□□□□ 0.85
CAPN1-226ENST00000533820 DEPTORQ8TB45 409 aa20.34■□□□□ 0.85
CAPN1-226ENST00000533820 JPH1Q9HDC5 661 aaPredicted RBP20.34■□□□□ 0.85
CAPN1-226ENST00000533820 ARHGAP28Q9P2N2 729 aa20.34■□□□□ 0.85
CAPN1-226ENST00000533820 TJP2Q9UDY2 1190 aa20.34■□□□□ 0.85
CAPN1-226ENST00000533820 AGTPBP1Q9UPW5 1226 aa20.34■□□□□ 0.85
CAPN1-226ENST00000533820 LOXHD1Q8IVV2 1947 aa20.34■□□□□ 0.85
CAPN1-226ENST00000533820 STBD1O95210 358 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms