RNA–Protein interactions for RNA: ENST00000533818.5

CSDE1-215, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-215ENST00000533818 NUB1Q9Y5A7 615 aa11.59□□□□□ -0.55
CSDE1-215ENST00000533818 SH2B2O14492 632 aaPredicted RBP11.58□□□□□ -0.56
CSDE1-215ENST00000533818 VNN2O95498 520 aa11.58□□□□□ -0.56
CSDE1-215ENST00000533818 JUPP14923 745 aa11.58□□□□□ -0.56
CSDE1-215ENST00000533818 CDC25CP30307 473 aa11.58□□□□□ -0.56
CSDE1-215ENST00000533818 MRPS21P82921 87 aaKnown RBP11.58□□□□□ -0.56
CSDE1-215ENST00000533818 SCRN1Q12765 414 aa11.58□□□□□ -0.56
CSDE1-215ENST00000533818 NR1H3Q13133 447 aa11.58□□□□□ -0.56
CSDE1-215ENST00000533818 XKR9Q5GH70 373 aa11.58□□□□□ -0.56
CSDE1-215ENST00000533818 ARHGAP40Q5TG30 622 aa11.58□□□□□ -0.56
CSDE1-215ENST00000533818 OTUD6AQ7L8S5 288 aa11.58□□□□□ -0.56
CSDE1-215ENST00000533818 ITIH5Q86UX2 942 aa11.58□□□□□ -0.56
CSDE1-215ENST00000533818 MICU3Q86XE3 530 aa11.58□□□□□ -0.56
CSDE1-215ENST00000533818 ALLCQ8N6M5 410 aa11.58□□□□□ -0.56
CSDE1-215ENST00000533818 TXNDC5Q8NBS9 432 aaKnown RBP11.58□□□□□ -0.56
CSDE1-215ENST00000533818 APPL2Q8NEU8 664 aa11.58□□□□□ -0.56
CSDE1-215ENST00000533818 ASAP3Q8TDY4 903 aa11.58□□□□□ -0.56
CSDE1-215ENST00000533818 TMEM176AQ96HP8 235 aa11.58□□□□□ -0.56
CSDE1-215ENST00000533818 MTA3Q9BTC8 594 aa11.58□□□□□ -0.56
CSDE1-215ENST00000533818 NFKBIZQ9BYH8 718 aa11.58□□□□□ -0.56
CSDE1-215ENST00000533818 FAM117AQ9C073 453 aa11.58□□□□□ -0.56
CSDE1-215ENST00000533818 TDP1Q9NUW8 608 aa11.58□□□□□ -0.56
CSDE1-215ENST00000533818 KNTC1P50748 2209 aa11.58□□□□□ -0.56
CSDE1-215ENST00000533818 TCRBV21S2A2A0A5A6 115 aa11.57□□□□□ -0.56
CSDE1-215ENST00000533818 SGK1O00141 431 aa11.57□□□□□ -0.56
CSDE1-215ENST00000533818 PODXLO00592 558 aa11.57□□□□□ -0.56
CSDE1-215ENST00000533818 N4BP3O15049 544 aa11.57□□□□□ -0.56
CSDE1-215ENST00000533818 FLRT2O43155 660 aa11.57□□□□□ -0.56
CSDE1-215ENST00000533818 TNFSF14O43557 240 aa11.57□□□□□ -0.56
CSDE1-215ENST00000533818 EDIL3O43854 480 aa11.57□□□□□ -0.56
CSDE1-215ENST00000533818 CILPO75339 1184 aa11.57□□□□□ -0.56
CSDE1-215ENST00000533818 KLF8O95600 359 aaPredicted RBP11.57□□□□□ -0.56
CSDE1-215ENST00000533818 ZNF883P0CG24 379 aa11.57□□□□□ -0.56
CSDE1-215ENST00000533818 MYO1EQ12965 1108 aa11.57□□□□□ -0.56
CSDE1-215ENST00000533818 SERINC3Q13530 473 aa11.57□□□□□ -0.56
CSDE1-215ENST00000533818 RTP5Q14D33 572 aa11.57□□□□□ -0.56
CSDE1-215ENST00000533818 TMEM132AQ24JP5 1023 aa11.57□□□□□ -0.56
CSDE1-215ENST00000533818 SYCP2LQ5T4T6 812 aa11.57□□□□□ -0.56
CSDE1-215ENST00000533818 DBX2Q6ZNG2 339 aa11.57□□□□□ -0.56
CSDE1-215ENST00000533818 SGMS1Q86VZ5 419 aa11.57□□□□□ -0.56
CSDE1-215ENST00000533818 MAB21L3Q8N8X9 362 aa11.57□□□□□ -0.56
CSDE1-215ENST00000533818 IL17RCQ8NAC3 791 aa11.57□□□□□ -0.56
CSDE1-215ENST00000533818 RIN3Q8TB24 985 aa11.57□□□□□ -0.56
CSDE1-215ENST00000533818 TTC9Q92623 222 aa11.57□□□□□ -0.56
CSDE1-215ENST00000533818 ATP2A3Q93084 1043 aa11.57□□□□□ -0.56
CSDE1-215ENST00000533818 TMEM87BQ96K49 555 aa11.57□□□□□ -0.56
CSDE1-215ENST00000533818 IL25Q9H293 177 aa11.57□□□□□ -0.56
CSDE1-215ENST00000533818 FZD8Q9H461 694 aa11.57□□□□□ -0.56
CSDE1-215ENST00000533818 PDZD7Q9H5P4 517 aa11.57□□□□□ -0.56
CSDE1-215ENST00000533818 GAREM1Q9H706 876 aa11.57□□□□□ -0.56
CSDE1-215ENST00000533818 KIF9Q9HAQ2 790 aa11.57□□□□□ -0.56
CSDE1-215ENST00000533818 CPNE5Q9HCH3 593 aa11.57□□□□□ -0.56
CSDE1-215ENST00000533818 C6orf50Q9HD87 102 aa11.57□□□□□ -0.56
CSDE1-215ENST00000533818 XPNPEP1Q9NQW7 623 aa11.57□□□□□ -0.56
CSDE1-215ENST00000533818 DUS2Q9NX74 493 aaKnown RBP11.57□□□□□ -0.56
CSDE1-215ENST00000533818 WRAP73Q9P2S5 460 aaPredicted RBP11.57□□□□□ -0.56
CSDE1-215ENST00000533818 ZMYM5Q9UJ78 669 aa11.57□□□□□ -0.56
CSDE1-215ENST00000533818 TSC2P49815 1807 aa11.57□□□□□ -0.56
CSDE1-215ENST00000533818 EML1O00423 815 aa11.56□□□□□ -0.56
CSDE1-215ENST00000533818 SOAT2O75908 522 aa11.56□□□□□ -0.56
CSDE1-215ENST00000533818 OR4Q2P0C623 313 aa11.56□□□□□ -0.56
CSDE1-215ENST00000533818 MARCKSP29966 332 aaPredicted RBP11.56□□□□□ -0.56
CSDE1-215ENST00000533818 YWHABP31946 246 aaKnown RBP11.56□□□□□ -0.56
CSDE1-215ENST00000533818 HNF1BP35680 557 aa11.56□□□□□ -0.56
CSDE1-215ENST00000533818 LIFRP42702 1097 aa11.56□□□□□ -0.56
CSDE1-215ENST00000533818 USP11P51784 963 aa11.56□□□□□ -0.56
CSDE1-215ENST00000533818 RIPPLY3P57055 190 aa11.56□□□□□ -0.56
CSDE1-215ENST00000533818 TMPRSS3P57727 454 aa11.56□□□□□ -0.56
CSDE1-215ENST00000533818 SOX4Q06945 474 aaPredicted RBP11.56□□□□□ -0.56
CSDE1-215ENST00000533818 FUT2Q10981 343 aa11.56□□□□□ -0.56
CSDE1-215ENST00000533818 UBAP2LQ14157 1087 aaKnown RBP11.56□□□□□ -0.56
CSDE1-215ENST00000533818 PTPRNQ16849 979 aa11.56□□□□□ -0.56
CSDE1-215ENST00000533818 EOGTQ5NDL2 527 aa11.56□□□□□ -0.56
CSDE1-215ENST00000533818 BROXQ5VW32 411 aa11.56□□□□□ -0.56
CSDE1-215ENST00000533818 TTC16Q8NEE8 873 aa11.56□□□□□ -0.56
CSDE1-215ENST00000533818 SUSD3Q96L08 255 aa11.56□□□□□ -0.56
CSDE1-215ENST00000533818 ADPGKQ9BRR6 497 aa11.56□□□□□ -0.56
CSDE1-215ENST00000533818 NRSN2Q9GZP1 204 aa11.56□□□□□ -0.56
CSDE1-215ENST00000533818 ZMYND12Q9H0C1 365 aa11.56□□□□□ -0.56
CSDE1-215ENST00000533818 IL21Q9HBE4 155 aa11.56□□□□□ -0.56
CSDE1-215ENST00000533818 PRMT7Q9NVM4 692 aaPredicted RBP11.56□□□□□ -0.56
CSDE1-215ENST00000533818 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.56□□□□□ -0.56
CSDE1-215ENST00000533818 BTBD3Q9Y2F9 522 aa11.56□□□□□ -0.56
CSDE1-215ENST00000533818 FNDC3AQ9Y2H6 1198 aaKnown RBP11.56□□□□□ -0.56
CSDE1-215ENST00000533818 PCDHGB2Q9Y5G2 931 aa11.56□□□□□ -0.56
CSDE1-215ENST00000533818 LRRK2Q5S007 2527 aa11.56□□□□□ -0.56
CSDE1-215ENST00000533818 NUP210Q8TEM1 1887 aaPredicted RBP11.55□□□□□ -0.56
CSDE1-215ENST00000533818 PTPRDP23468 1912 aa11.55□□□□□ -0.56
CSDE1-215ENST00000533818 SMIM28A0A1B0GU29 152 aa11.55□□□□□ -0.56
CSDE1-215ENST00000533818 ESYT2A0FGR8 921 aa11.55□□□□□ -0.56
CSDE1-215ENST00000533818 TTLL13PA6NNM8 815 aa11.55□□□□□ -0.56
CSDE1-215ENST00000533818 TERTO14746 1132 aaKnown RBP11.55□□□□□ -0.56
CSDE1-215ENST00000533818 ZBTB39O15060 712 aa11.55□□□□□ -0.56
CSDE1-215ENST00000533818 CER1O95813 267 aa11.55□□□□□ -0.56
CSDE1-215ENST00000533818 P4HBP07237 508 aaKnown RBP11.55□□□□□ -0.56
CSDE1-215ENST00000533818 GLRA2P23416 452 aa11.55□□□□□ -0.56
CSDE1-215ENST00000533818 MAOBP27338 520 aa11.55□□□□□ -0.56
CSDE1-215ENST00000533818 TIE1P35590 1138 aa11.55□□□□□ -0.56
CSDE1-215ENST00000533818 ACTN2P35609 894 aa11.55□□□□□ -0.56
CSDE1-215ENST00000533818 ARL2P36404 184 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms