RNA–Protein interactions for RNA: ENST00000533562.1

CAPRIN1-213, Transcript of cell cycle associated protein 1, humanhuman

TSL 2

Gene CAPRIN1, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-213ENST00000533562 NOC3LQ8WTT2 800 aaKnown RBP13.37□□□□□ -0.27
CAPRIN1-213ENST00000533562 GCNAQ96QF7 691 aa13.37□□□□□ -0.27
CAPRIN1-213ENST00000533562 CBWD1Q9BRT8 395 aa13.37□□□□□ -0.27
CAPRIN1-213ENST00000533562 PCIF1Q9H4Z3 704 aa13.37□□□□□ -0.27
CAPRIN1-213ENST00000533562 ITGA11Q9UKX5 1188 aa13.37□□□□□ -0.27
CAPRIN1-213ENST00000533562 R4GN57 208 aa13.37□□□□□ -0.27
CAPRIN1-213ENST00000533562 MIA3Q5JRA6 1907 aa13.37□□□□□ -0.27
CAPRIN1-213ENST00000533562 ANK1P16157 1881 aa13.36□□□□□ -0.27
CAPRIN1-213ENST00000533562 GOLGA8IPA6NC78 632 aa13.36□□□□□ -0.27
CAPRIN1-213ENST00000533562 ZNF233A6NK53 670 aa13.36□□□□□ -0.27
CAPRIN1-213ENST00000533562 GOLGA8JA6NMD2 632 aa13.36□□□□□ -0.27
CAPRIN1-213ENST00000533562 CHADO15335 359 aa13.36□□□□□ -0.27
CAPRIN1-213ENST00000533562 SOAT2O75908 522 aa13.36□□□□□ -0.27
CAPRIN1-213ENST00000533562 KRT19P08727 400 aa13.36□□□□□ -0.27
CAPRIN1-213ENST00000533562 HAPLN1P10915 354 aaPredicted RBP13.36□□□□□ -0.27
CAPRIN1-213ENST00000533562 WEE1P30291 646 aa13.36□□□□□ -0.27
CAPRIN1-213ENST00000533562 CDC25CP30307 473 aa13.36□□□□□ -0.27
CAPRIN1-213ENST00000533562 CSTF1Q05048 431 aaKnown RBP13.36□□□□□ -0.27
CAPRIN1-213ENST00000533562 C1QBPQ07021 282 aaKnown RBP13.36□□□□□ -0.27
CAPRIN1-213ENST00000533562 SURF1Q15526 300 aa13.36□□□□□ -0.27
CAPRIN1-213ENST00000533562 E2F4Q16254 413 aa13.36□□□□□ -0.27
CAPRIN1-213ENST00000533562 NFE2Q16621 373 aaPredicted RBP13.36□□□□□ -0.27
CAPRIN1-213ENST00000533562 GPR158Q5T848 1215 aa13.36□□□□□ -0.27
CAPRIN1-213ENST00000533562 C1orf228Q6PIY5 440 aa13.36□□□□□ -0.27
CAPRIN1-213ENST00000533562 LRRTM3Q86VH5 581 aa13.36□□□□□ -0.27
CAPRIN1-213ENST00000533562 MAML2Q8IZL2 1156 aaPredicted RBP13.36□□□□□ -0.27
CAPRIN1-213ENST00000533562 C1orf127Q8N9H9 656 aa13.36□□□□□ -0.27
CAPRIN1-213ENST00000533562 ZSWIM2Q8NEG5 633 aa13.36□□□□□ -0.27
CAPRIN1-213ENST00000533562 ATRIPQ8WXE1 791 aa13.36□□□□□ -0.27
CAPRIN1-213ENST00000533562 FAM3CQ92520 227 aa13.36□□□□□ -0.27
CAPRIN1-213ENST00000533562 DHX58Q96C10 678 aa13.36□□□□□ -0.27
CAPRIN1-213ENST00000533562 ACBD6Q9BR61 282 aa13.36□□□□□ -0.27
CAPRIN1-213ENST00000533562 FGFBP2Q9BYJ0 223 aa13.36□□□□□ -0.27
CAPRIN1-213ENST00000533562 TRIM9Q9C026 710 aa13.36□□□□□ -0.27
CAPRIN1-213ENST00000533562 KIAA1586Q9HCI6 787 aa13.36□□□□□ -0.27
CAPRIN1-213ENST00000533562 PDE11AQ9HCR9 933 aa13.36□□□□□ -0.27
CAPRIN1-213ENST00000533562 ABI2Q9NYB9 513 aaPredicted RBP13.36□□□□□ -0.27
CAPRIN1-213ENST00000533562 ZMYM5Q9UJ78 669 aa13.36□□□□□ -0.27
CAPRIN1-213ENST00000533562 PCDHB5Q9Y5E4 795 aa13.36□□□□□ -0.27
CAPRIN1-213ENST00000533562 PIAS3Q9Y6X2 628 aa13.36□□□□□ -0.27
CAPRIN1-213ENST00000533562 KINO60870 393 aaKnown RBP13.35□□□□□ -0.27
CAPRIN1-213ENST00000533562 TMEM191BP0C7N4 346 aa13.35□□□□□ -0.27
CAPRIN1-213ENST00000533562 ZSCAN22P10073 491 aaPredicted RBP13.35□□□□□ -0.27
CAPRIN1-213ENST00000533562 LHX1P48742 406 aa13.35□□□□□ -0.27
CAPRIN1-213ENST00000533562 WNT7BP56706 349 aa13.35□□□□□ -0.27
CAPRIN1-213ENST00000533562 ASIC1P78348 528 aa13.35□□□□□ -0.27
CAPRIN1-213ENST00000533562 MYL7Q01449 175 aa13.35□□□□□ -0.27
CAPRIN1-213ENST00000533562 FCHO2Q0JRZ9 810 aa13.35□□□□□ -0.27
CAPRIN1-213ENST00000533562 MYO1EQ12965 1108 aa13.35□□□□□ -0.27
CAPRIN1-213ENST00000533562 FZD5Q13467 585 aa13.35□□□□□ -0.27
CAPRIN1-213ENST00000533562 DUOXA2Q1HG44 320 aa13.35□□□□□ -0.27
CAPRIN1-213ENST00000533562 STXBP5Q5T5C0 1151 aa13.35□□□□□ -0.27
CAPRIN1-213ENST00000533562 FOXD4L5Q5VV16 416 aaPredicted RBP13.35□□□□□ -0.27
CAPRIN1-213ENST00000533562 ATL3Q6DD88 541 aa13.35□□□□□ -0.27
CAPRIN1-213ENST00000533562 CNNM4Q6P4Q7 775 aa13.35□□□□□ -0.27
CAPRIN1-213ENST00000533562 PDCL2Q8N4E4 241 aa13.35□□□□□ -0.27
CAPRIN1-213ENST00000533562 SPATA18Q8TC71 538 aa13.35□□□□□ -0.27
CAPRIN1-213ENST00000533562 GIPC2Q8TF65 315 aa13.35□□□□□ -0.27
CAPRIN1-213ENST00000533562 FOXD4L4Q8WXT5 416 aaPredicted RBP13.35□□□□□ -0.27
CAPRIN1-213ENST00000533562 MSANTD3Q96H12 275 aa13.35□□□□□ -0.27
CAPRIN1-213ENST00000533562 ANKRD36BP1Q96IX9 119 aa13.35□□□□□ -0.27
CAPRIN1-213ENST00000533562 LPIN3Q9BQK8 851 aa13.35□□□□□ -0.27
CAPRIN1-213ENST00000533562 TASP1Q9H6P5 420 aa13.35□□□□□ -0.27
CAPRIN1-213ENST00000533562 C8orf33Q9H7E9 229 aaPredicted RBP13.35□□□□□ -0.27
CAPRIN1-213ENST00000533562 MAGEF1Q9HAY2 307 aa13.35□□□□□ -0.27
CAPRIN1-213ENST00000533562 GDAP2Q9NXN4 497 aa13.35□□□□□ -0.27
CAPRIN1-213ENST00000533562 DDX43Q9NXZ2 648 aaKnown RBP13.35□□□□□ -0.27
CAPRIN1-213ENST00000533562 OBP2AQ9NY56 170 aa13.35□□□□□ -0.27
CAPRIN1-213ENST00000533562 CFAP45Q9UL16 551 aa13.35□□□□□ -0.27
CAPRIN1-213ENST00000533562 NDRG2Q9UN36 371 aaKnown RBP13.35□□□□□ -0.27
CAPRIN1-213ENST00000533562 OTOGLQ3ZCN5 2332 aa13.35□□□□□ -0.27
CAPRIN1-213ENST00000533562 GPR179Q6PRD1 2367 aa13.34□□□□□ -0.27
CAPRIN1-213ENST00000533562 EIF3DO15371 548 aaKnown RBP eCLIP13.34□□□□□ -0.27
CAPRIN1-213ENST00000533562 POLR2DO15514 142 aaKnown RBP13.34□□□□□ -0.27
CAPRIN1-213ENST00000533562 TNNC2P02585 160 aa13.34□□□□□ -0.27
CAPRIN1-213ENST00000533562 ATF6P18850 670 aa13.34□□□□□ -0.27
CAPRIN1-213ENST00000533562 ME1P48163 572 aa13.34□□□□□ -0.27
CAPRIN1-213ENST00000533562 CDR1P51861 262 aa13.34□□□□□ -0.27
CAPRIN1-213ENST00000533562 KPNA1P52294 538 aaPredicted RBP13.34□□□□□ -0.27
CAPRIN1-213ENST00000533562 SNRPFP62306 86 aaKnown RBP13.34□□□□□ -0.27
CAPRIN1-213ENST00000533562 BFSP1Q12934 665 aa13.34□□□□□ -0.27
CAPRIN1-213ENST00000533562 PPP2R5DQ14738 602 aa13.34□□□□□ -0.27
CAPRIN1-213ENST00000533562 ARHGAP29Q52LW3 1261 aa13.34□□□□□ -0.27
CAPRIN1-213ENST00000533562 SHC4Q6S5L8 630 aa13.34□□□□□ -0.27
CAPRIN1-213ENST00000533562 MAMSTRQ6ZN01 415 aa13.34□□□□□ -0.27
CAPRIN1-213ENST00000533562 DPH6Q7L8W6 267 aa13.34□□□□□ -0.27
CAPRIN1-213ENST00000533562 GPIHBP1Q8IV16 184 aa13.34□□□□□ -0.27
CAPRIN1-213ENST00000533562 TOP6BLQ8N6T0 577 aa13.34□□□□□ -0.27
CAPRIN1-213ENST00000533562 ZNF507Q8TCN5 953 aa13.34□□□□□ -0.27
CAPRIN1-213ENST00000533562 HPS3Q969F9 1004 aa13.34□□□□□ -0.27
CAPRIN1-213ENST00000533562 C7orf25Q9BPX7 421 aa13.34□□□□□ -0.27
CAPRIN1-213ENST00000533562 IER2Q9BTL4 223 aa13.34□□□□□ -0.27
CAPRIN1-213ENST00000533562 MTMR12Q9C0I1 747 aa13.34□□□□□ -0.27
CAPRIN1-213ENST00000533562 LMAN1LQ9HAT1 526 aa13.34□□□□□ -0.27
CAPRIN1-213ENST00000533562 INTS13Q9NVM9 706 aa13.34□□□□□ -0.27
CAPRIN1-213ENST00000533562 THG1LQ9NWX6 298 aaKnown RBP13.34□□□□□ -0.27
CAPRIN1-213ENST00000533562 FAM13BQ9NYF5 915 aa13.34□□□□□ -0.27
CAPRIN1-213ENST00000533562 L1RE1Q9UN81 338 aa13.34□□□□□ -0.27
CAPRIN1-213ENST00000533562 PCDHGA2Q9Y5H1 932 aa13.34□□□□□ -0.27
CAPRIN1-213ENST00000533562 SNX9Q9Y5X1 595 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms