RNA–Protein interactions for RNA: ENST00000533246.5

BDNF-218, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,000 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-218ENST00000533246 KCNV1Q6PIU1 500 aa12.83□□□□□ -0.36
BDNF-218ENST00000533246 RCOR2Q8IZ40 523 aa12.83□□□□□ -0.36
BDNF-218ENST00000533246 TNFRSF25Q93038 417 aa12.83□□□□□ -0.36
BDNF-218ENST00000533246 TTC25Q96NG3 672 aa12.83□□□□□ -0.36
BDNF-218ENST00000533246 NIF3L1Q9GZT8 377 aa12.83□□□□□ -0.36
BDNF-218ENST00000533246 OLFML3Q9NRN5 406 aa12.83□□□□□ -0.36
BDNF-218ENST00000533246 SPATA7Q9P0W8 599 aa12.83□□□□□ -0.36
BDNF-218ENST00000533246 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.83□□□□□ -0.36
BDNF-218ENST00000533246 CAPN15O75808 1086 aa12.82□□□□□ -0.36
BDNF-218ENST00000533246 HAUS5O94927 633 aa12.82□□□□□ -0.36
BDNF-218ENST00000533246 OVGP1Q12889 678 aa12.82□□□□□ -0.36
BDNF-218ENST00000533246 AGBL3Q8NEM8 1001 aa12.82□□□□□ -0.36
BDNF-218ENST00000533246 OR6P1Q8NGX9 317 aa12.82□□□□□ -0.36
BDNF-218ENST00000533246 YIPF2Q9BWQ6 316 aa12.82□□□□□ -0.36
BDNF-218ENST00000533246 SMARCAD1Q9H4L7 1026 aa12.82□□□□□ -0.36
BDNF-218ENST00000533246 GPATCH2LQ9NWQ4 482 aa12.82□□□□□ -0.36
BDNF-218ENST00000533246 BLOC1S6Q9UL45 172 aa12.82□□□□□ -0.36
BDNF-218ENST00000533246 C2CD2Q9Y426 696 aa12.82□□□□□ -0.36
BDNF-218ENST00000533246 C6orf222P0C671 652 aaPredicted RBP12.82□□□□□ -0.36
BDNF-218ENST00000533246 PYGMP11217 842 aa12.82□□□□□ -0.36
BDNF-218ENST00000533246 PRLRP16471 622 aa12.82□□□□□ -0.36
BDNF-218ENST00000533246 ANXA13P27216 316 aa12.82□□□□□ -0.36
BDNF-218ENST00000533246 PMLP29590 882 aa12.82□□□□□ -0.36
BDNF-218ENST00000533246 GRIK3Q13003 919 aa12.82□□□□□ -0.36
BDNF-218ENST00000533246 STAT4Q14765 748 aa12.82□□□□□ -0.36
BDNF-218ENST00000533246 KLHL38Q2WGJ6 581 aa12.82□□□□□ -0.36
BDNF-218ENST00000533246 TMEM139Q8IV31 216 aa12.82□□□□□ -0.36
BDNF-218ENST00000533246 FBXO16Q8IX29 292 aaPredicted RBP12.82□□□□□ -0.36
BDNF-218ENST00000533246 LRRC34Q8IZ02 419 aa12.82□□□□□ -0.36
BDNF-218ENST00000533246 C4orf32Q8N8J7 132 aa12.82□□□□□ -0.36
BDNF-218ENST00000533246 MYCBPAPQ8TBZ2 947 aa12.82□□□□□ -0.36
BDNF-218ENST00000533246 PGBD4Q96DM1 585 aa12.82□□□□□ -0.36
BDNF-218ENST00000533246 ERP27Q96DN0 273 aa12.82□□□□□ -0.36
BDNF-218ENST00000533246 TMEM121Q9BTD3 319 aa12.82□□□□□ -0.36
BDNF-218ENST00000533246 METTL5Q9NRN9 209 aaKnown RBP12.82□□□□□ -0.36
BDNF-218ENST00000533246 XPO7Q9UIA9 1087 aaKnown RBP12.82□□□□□ -0.36
BDNF-218ENST00000533246 RAB21Q9UL25 225 aa12.82□□□□□ -0.36
BDNF-218ENST00000533246 DCTN3O75935 186 aa12.82□□□□□ -0.36
BDNF-218ENST00000533246 HOXA10P31260 410 aaPredicted RBP12.82□□□□□ -0.36
BDNF-218ENST00000533246 PCYT1AP49585 367 aa12.82□□□□□ -0.36
BDNF-218ENST00000533246 C11orf91Q3C1V1 193 aa12.82□□□□□ -0.36
BDNF-218ENST00000533246 ATG16L1Q676U5 607 aa12.82□□□□□ -0.36
BDNF-218ENST00000533246 MED15Q96RN5 788 aa12.82□□□□□ -0.36
BDNF-218ENST00000533246 SPON2Q9BUD6 331 aa12.82□□□□□ -0.36
BDNF-218ENST00000533246 DNAAF2Q9NVR5 837 aaKnown RBP12.82□□□□□ -0.36
BDNF-218ENST00000533246 BFARQ9NZS9 450 aa12.82□□□□□ -0.36
BDNF-218ENST00000533246 ZC3H7BQ9UGR2 993 aaKnown RBP12.82□□□□□ -0.36
BDNF-218ENST00000533246 NPTXRO95502 500 aa12.81□□□□□ -0.36
BDNF-218ENST00000533246 SKIP12755 728 aa12.81□□□□□ -0.36
BDNF-218ENST00000533246 RAP1GAPP47736 663 aa12.81□□□□□ -0.36
BDNF-218ENST00000533246 OCRLQ01968 901 aa12.81□□□□□ -0.36
BDNF-218ENST00000533246 KIZQ2M2Z5 673 aa12.81□□□□□ -0.36
BDNF-218ENST00000533246 DAB2IPQ5VWQ8 1189 aa12.81□□□□□ -0.36
BDNF-218ENST00000533246 OR6J1Q8NGC5 347 aa12.81□□□□□ -0.36
BDNF-218ENST00000533246 IL31RAQ8NI17 732 aa12.81□□□□□ -0.36
BDNF-218ENST00000533246 SPATA20Q8TB22 786 aa12.81□□□□□ -0.36
BDNF-218ENST00000533246 HPDLQ96IR7 371 aa12.81□□□□□ -0.36
BDNF-218ENST00000533246 FAM161BQ96MY7 647 aa12.81□□□□□ -0.36
BDNF-218ENST00000533246 AGO4Q9HCK5 861 aaKnown RBP12.81□□□□□ -0.36
BDNF-218ENST00000533246 PALMDQ9NP74 551 aa12.81□□□□□ -0.36
BDNF-218ENST00000533246 PRELID1Q9Y255 219 aa12.81□□□□□ -0.36
BDNF-218ENST00000533246 GOLGA8CPA6NN73 597 aa12.81□□□□□ -0.36
BDNF-218ENST00000533246 PPP1R11O60927 126 aaPredicted RBP12.81□□□□□ -0.36
BDNF-218ENST00000533246 FAM107AO95990 144 aa12.81□□□□□ -0.36
BDNF-218ENST00000533246 CPA2P48052 419 aa12.81□□□□□ -0.36
BDNF-218ENST00000533246 GCLCP48506 637 aaPredicted RBP12.81□□□□□ -0.36
BDNF-218ENST00000533246 TUFMP49411 452 aaKnown RBP12.81□□□□□ -0.36
BDNF-218ENST00000533246 CDH8P55286 799 aa12.81□□□□□ -0.36
BDNF-218ENST00000533246 RBP5P82980 135 aa12.81□□□□□ -0.36
BDNF-218ENST00000533246 BZW1Q7L1Q6 419 aaKnown RBP12.81□□□□□ -0.36
BDNF-218ENST00000533246 C2orf69Q8N8R5 385 aa12.81□□□□□ -0.36
BDNF-218ENST00000533246 GMCL1P1Q8NEA9 526 aa12.81□□□□□ -0.36
BDNF-218ENST00000533246 CXorf38Q8TB03 319 aa12.81□□□□□ -0.36
BDNF-218ENST00000533246 RAPGEF5Q92565 580 aa12.81□□□□□ -0.36
BDNF-218ENST00000533246 PLEKHG4BQ96PX9 1271 aa12.81□□□□□ -0.36
BDNF-218ENST00000533246 TIPINQ9BVW5 301 aa12.81□□□□□ -0.36
BDNF-218ENST00000533246 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.81□□□□□ -0.36
BDNF-218ENST00000533246 STAP1Q9ULZ2 295 aa12.81□□□□□ -0.36
BDNF-218ENST00000533246 MRPL42Q9Y6G3 142 aaKnown RBP12.81□□□□□ -0.36
BDNF-218ENST00000533246 ANKRD63C9JTQ0 380 aa12.81□□□□□ -0.36
BDNF-218ENST00000533246 RPS6KA5O75582 802 aa12.81□□□□□ -0.36
BDNF-218ENST00000533246 PIAS1O75925 651 aa12.81□□□□□ -0.36
BDNF-218ENST00000533246 VTNP04004 478 aa12.81□□□□□ -0.36
BDNF-218ENST00000533246 ART3Q13508 389 aa12.81□□□□□ -0.36
BDNF-218ENST00000533246 DCAF6Q58WW2 860 aa12.81□□□□□ -0.36
BDNF-218ENST00000533246 LRRC43Q8N309 656 aa12.81□□□□□ -0.36
BDNF-218ENST00000533246 PIP4K2CQ8TBX8 421 aa12.81□□□□□ -0.36
BDNF-218ENST00000533246 HSD3B7Q9H2F3 369 aa12.81□□□□□ -0.36
BDNF-218ENST00000533246 C10orf88Q9H8K7 445 aa12.81□□□□□ -0.36
BDNF-218ENST00000533246 UBN1Q9NPG3 1134 aa12.81□□□□□ -0.36
BDNF-218ENST00000533246 PXMP2Q9NR77 195 aa12.81□□□□□ -0.36
BDNF-218ENST00000533246 DDX56Q9NY93 547 aaKnown RBP12.81□□□□□ -0.36
BDNF-218ENST00000533246 LMCD1Q9NZU5 365 aa12.81□□□□□ -0.36
BDNF-218ENST00000533246 LY6KQ17RY6 165 aa12.8□□□□□ -0.36
BDNF-218ENST00000533246 LRRC36Q1X8D7 754 aa12.8□□□□□ -0.36
BDNF-218ENST00000533246 PAN2Q504Q3 1202 aaKnown RBP12.8□□□□□ -0.36
BDNF-218ENST00000533246 IL31Q6EBC2 164 aa12.8□□□□□ -0.36
BDNF-218ENST00000533246 TRMT10CQ7L0Y3 403 aaKnown RBP12.8□□□□□ -0.36
BDNF-218ENST00000533246 LCA5Q86VQ0 697 aa12.8□□□□□ -0.36
BDNF-218ENST00000533246 WDR18Q9BV38 432 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms