RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 ASPAP45381 313 aa12.83□□□□□ -0.36
SSBP3-214ENST00000533209 RAP1GAPP47736 663 aa12.83□□□□□ -0.36
SSBP3-214ENST00000533209 CDH8P55286 799 aa12.83□□□□□ -0.36
SSBP3-214ENST00000533209 NOP14P78316 857 aaKnown RBP12.83□□□□□ -0.36
SSBP3-214ENST00000533209 MYL7Q01449 175 aa12.83□□□□□ -0.36
SSBP3-214ENST00000533209 TSPY1Q01534 308 aa12.83□□□□□ -0.36
SSBP3-214ENST00000533209 ADCY1Q08828 1119 aa12.83□□□□□ -0.36
SSBP3-214ENST00000533209 KCNH2Q12809 1159 aa12.83□□□□□ -0.36
SSBP3-214ENST00000533209 SMAD2Q15796 467 aaKnown RBP12.83□□□□□ -0.36
SSBP3-214ENST00000533209 TPD52L1Q16890 204 aaPredicted RBP12.83□□□□□ -0.36
SSBP3-214ENST00000533209 CCDC142Q17RM4 750 aa12.83□□□□□ -0.36
SSBP3-214ENST00000533209 SKOR2Q2VWA4 1001 aaPredicted RBP12.83□□□□□ -0.36
SSBP3-214ENST00000533209 SLC39A12Q504Y0 691 aa12.83□□□□□ -0.36
SSBP3-214ENST00000533209 INTS6LQ5JSJ4 861 aaKnown RBP12.83□□□□□ -0.36
SSBP3-214ENST00000533209 SCARA5Q6ZMJ2 495 aa12.83□□□□□ -0.36
SSBP3-214ENST00000533209 CCDC149Q6ZUS6 474 aa12.83□□□□□ -0.36
SSBP3-214ENST00000533209 RTL10Q7L3V2 364 aa12.83□□□□□ -0.36
SSBP3-214ENST00000533209 GPR149Q86SP6 731 aa12.83□□□□□ -0.36
SSBP3-214ENST00000533209 ATAD1Q8NBU5 361 aa12.83□□□□□ -0.36
SSBP3-214ENST00000533209 PGLYRP2Q96PD5 576 aa12.83□□□□□ -0.36
SSBP3-214ENST00000533209 BCO2Q9BYV7 579 aa12.83□□□□□ -0.36
SSBP3-214ENST00000533209 RHOBTB2Q9BYZ6 727 aa12.83□□□□□ -0.36
SSBP3-214ENST00000533209 IMPG2Q9BZV3 1241 aa12.83□□□□□ -0.36
SSBP3-214ENST00000533209 DNAJC25Q9H1X3 360 aa12.83□□□□□ -0.36
SSBP3-214ENST00000533209 CRISPLD1Q9H336 500 aa12.83□□□□□ -0.36
SSBP3-214ENST00000533209 TMLHEQ9NVH6 421 aa12.83□□□□□ -0.36
SSBP3-214ENST00000533209 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.83□□□□□ -0.36
SSBP3-214ENST00000533209 PRRG1O14668 218 aa12.82□□□□□ -0.36
SSBP3-214ENST00000533209 N4BP1O75113 896 aaKnown RBP12.82□□□□□ -0.36
SSBP3-214ENST00000533209 ATP2C2O75185 946 aa12.82□□□□□ -0.36
SSBP3-214ENST00000533209 CLSTN1O94985 981 aa12.82□□□□□ -0.36
SSBP3-214ENST00000533209 AFPP02771 609 aaKnown RBP12.82□□□□□ -0.36
SSBP3-214ENST00000533209 PDGFRBP09619 1106 aa12.82□□□□□ -0.36
SSBP3-214ENST00000533209 HNRNPA1P09651 372 aaKnown RBP eCLIP12.82□□□□□ -0.36
SSBP3-214ENST00000533209 P4HA1P13674 534 aa12.82□□□□□ -0.36
SSBP3-214ENST00000533209 HOXA9P31269 272 aa12.82□□□□□ -0.36
SSBP3-214ENST00000533209 ELF1P32519 619 aa12.82□□□□□ -0.36
SSBP3-214ENST00000533209 GNL1P36915 607 aaPredicted RBP12.82□□□□□ -0.36
SSBP3-214ENST00000533209 CDR1P51861 262 aa12.82□□□□□ -0.36
SSBP3-214ENST00000533209 NFKBIBQ15653 356 aa12.82□□□□□ -0.36
SSBP3-214ENST00000533209 TJAP1Q5JTD0 557 aa12.82□□□□□ -0.36
SSBP3-214ENST00000533209 PPM1LQ5SGD2 360 aa12.82□□□□□ -0.36
SSBP3-214ENST00000533209 CES5AQ6NT32 575 aa12.82□□□□□ -0.36
SSBP3-214ENST00000533209 DCP1BQ8IZD4 617 aaKnown RBP12.82□□□□□ -0.36
SSBP3-214ENST00000533209 OR6B3Q8NGW1 331 aa12.82□□□□□ -0.36
SSBP3-214ENST00000533209 TATDN2Q93075 761 aa12.82□□□□□ -0.36
SSBP3-214ENST00000533209 SYT15Q9BQS2 421 aa12.82□□□□□ -0.36
SSBP3-214ENST00000533209 FUCA2Q9BTY2 467 aa12.82□□□□□ -0.36
SSBP3-214ENST00000533209 PRKD2Q9BZL6 878 aa12.82□□□□□ -0.36
SSBP3-214ENST00000533209 NIF3L1Q9GZT8 377 aa12.82□□□□□ -0.36
SSBP3-214ENST00000533209 SNX25Q9H3E2 840 aa12.82□□□□□ -0.36
SSBP3-214ENST00000533209 CYP4F11Q9HBI6 524 aa12.82□□□□□ -0.36
SSBP3-214ENST00000533209 SAMSN1Q9NSI8 373 aaKnown RBP12.82□□□□□ -0.36
SSBP3-214ENST00000533209 CDH9Q9ULB4 789 aa12.82□□□□□ -0.36
SSBP3-214ENST00000533209 NFE2L3Q9Y4A8 694 aa12.82□□□□□ -0.36
SSBP3-214ENST00000533209 INSL5Q9Y5Q6 135 aa12.82□□□□□ -0.36
SSBP3-214ENST00000533209 P4HA2O15460 535 aa12.81□□□□□ -0.36
SSBP3-214ENST00000533209 CCL16O15467 120 aa12.81□□□□□ -0.36
SSBP3-214ENST00000533209 LETM1O95202 739 aaPredicted RBP12.81□□□□□ -0.36
SSBP3-214ENST00000533209 POU2F2P09086 479 aa12.81□□□□□ -0.36
SSBP3-214ENST00000533209 MTHFRP42898 656 aa12.81□□□□□ -0.36
SSBP3-214ENST00000533209 MTIF2P46199 727 aaKnown RBP12.81□□□□□ -0.36
SSBP3-214ENST00000533209 PSMC1P62191 440 aaKnown RBP12.81□□□□□ -0.36
SSBP3-214ENST00000533209 SMARCB1Q12824 385 aa12.81□□□□□ -0.36
SSBP3-214ENST00000533209 DUSP4Q13115 394 aa12.81□□□□□ -0.36
SSBP3-214ENST00000533209 CBX2Q14781 532 aaPredicted RBP12.81□□□□□ -0.36
SSBP3-214ENST00000533209 ANO6Q4KMQ2 910 aa12.81□□□□□ -0.36
SSBP3-214ENST00000533209 HSP90AA4PQ58FG1 418 aa12.81□□□□□ -0.36
SSBP3-214ENST00000533209 WDR44Q5JSH3 913 aa12.81□□□□□ -0.36
SSBP3-214ENST00000533209 CDKAL1Q5VV42 579 aa12.81□□□□□ -0.36
SSBP3-214ENST00000533209 FAM171BQ6P995 826 aa12.81□□□□□ -0.36
SSBP3-214ENST00000533209 CYP26C1Q6V0L0 522 aa12.81□□□□□ -0.36
SSBP3-214ENST00000533209 CREBRFQ8IUR6 639 aa12.81□□□□□ -0.36
SSBP3-214ENST00000533209 FAM114A1Q8IWE2 563 aa12.81□□□□□ -0.36
SSBP3-214ENST00000533209 TTC9BQ8N6N2 239 aa12.81□□□□□ -0.36
SSBP3-214ENST00000533209 CCDC150Q8NCX0 1101 aa12.81□□□□□ -0.36
SSBP3-214ENST00000533209 LMO3Q8TAP4 145 aa12.81□□□□□ -0.36
SSBP3-214ENST00000533209 C2orf15Q8WU43 125 aaKnown RBP12.81□□□□□ -0.36
SSBP3-214ENST00000533209 SMG7Q92540 1137 aaKnown RBP12.81□□□□□ -0.36
SSBP3-214ENST00000533209 FAXDC2Q96IV6 333 aa12.81□□□□□ -0.36
SSBP3-214ENST00000533209 RIPOR3Q96MK2 946 aa12.81□□□□□ -0.36
SSBP3-214ENST00000533209 DPEP3Q9H4B8 488 aa12.81□□□□□ -0.36
SSBP3-214ENST00000533209 POMKQ9H5K3 350 aa12.81□□□□□ -0.36
SSBP3-214ENST00000533209 CYP3A43Q9HB55 503 aa12.81□□□□□ -0.36
SSBP3-214ENST00000533209 CRTAC1Q9NQ79 661 aa12.81□□□□□ -0.36
SSBP3-214ENST00000533209 HSFX1Q9UBD0 423 aa12.81□□□□□ -0.36
SSBP3-214ENST00000533209 GTF3C4Q9UKN8 822 aa12.81□□□□□ -0.36
SSBP3-214ENST00000533209 FAM50BQ9Y247 325 aa12.81□□□□□ -0.36
SSBP3-214ENST00000533209 YIPF1Q9Y548 306 aa12.81□□□□□ -0.36
SSBP3-214ENST00000533209 SYCE3A1L190 88 aa12.8□□□□□ -0.36
SSBP3-214ENST00000533209 MYBPHLA2RUH7 354 aa12.8□□□□□ -0.36
SSBP3-214ENST00000533209 A8MXQ7 604 aa12.8□□□□□ -0.36
SSBP3-214ENST00000533209 PTPN1P18031 435 aaKnown RBP12.8□□□□□ -0.36
SSBP3-214ENST00000533209 MYL5Q02045 173 aa12.8□□□□□ -0.36
SSBP3-214ENST00000533209 INCA1Q0VD86 236 aa12.8□□□□□ -0.36
SSBP3-214ENST00000533209 NFE2Q16621 373 aaPredicted RBP12.8□□□□□ -0.36
SSBP3-214ENST00000533209 ATAT1Q5SQI0 421 aa12.8□□□□□ -0.36
SSBP3-214ENST00000533209 SPPL2BQ8TCT7 592 aa12.8□□□□□ -0.36
SSBP3-214ENST00000533209 NECTIN4Q96NY8 510 aa12.8□□□□□ -0.36
SSBP3-214ENST00000533209 LPIN3Q9BQK8 851 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 94.4 ms