RNA–Protein interactions for RNA: ENST00000533078.5

CMTM1-216, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-216ENST00000533078 ACDQ96AP0 544 aa12.5□□□□□ -0.41
CMTM1-216ENST00000533078 ZSCAN31Q96LW9 406 aaPredicted RBP12.5□□□□□ -0.41
CMTM1-216ENST00000533078 LRRC3BQ96PB8 259 aa12.5□□□□□ -0.41
CMTM1-216ENST00000533078 MSTO1Q9BUK6 570 aa12.5□□□□□ -0.41
CMTM1-216ENST00000533078 SH2B1Q9NRF2 756 aaPredicted RBP12.5□□□□□ -0.41
CMTM1-216ENST00000533078 C2orf42Q9NWW7 574 aa12.5□□□□□ -0.41
CMTM1-216ENST00000533078 ABI2Q9NYB9 513 aaPredicted RBP12.5□□□□□ -0.41
CMTM1-216ENST00000533078 ODF2LQ9ULJ1 636 aa12.5□□□□□ -0.41
CMTM1-216ENST00000533078 DERAQ9Y315 318 aa12.5□□□□□ -0.41
CMTM1-216ENST00000533078 PCDHB6Q9Y5E3 794 aa12.5□□□□□ -0.41
CMTM1-216ENST00000533078 CEP295Q9C0D2 2601 aa12.5□□□□□ -0.41
CMTM1-216ENST00000533078 FRYQ5TBA9 3013 aa12.5□□□□□ -0.41
CMTM1-216ENST00000533078 ZNF638Q14966 1978 aaKnown RBP12.49□□□□□ -0.41
CMTM1-216ENST00000533078 KIF26AQ9ULI4 1882 aaPredicted RBP12.49□□□□□ -0.41
CMTM1-216ENST00000533078 K7ENM7 598 aa12.49□□□□□ -0.41
CMTM1-216ENST00000533078 CYB561D2O14569 222 aa12.49□□□□□ -0.41
CMTM1-216ENST00000533078 TRDMT1O14717 391 aaKnown RBP12.49□□□□□ -0.41
CMTM1-216ENST00000533078 RNF40O75150 1001 aa12.49□□□□□ -0.41
CMTM1-216ENST00000533078 FAM13AO94988 1023 aa12.49□□□□□ -0.41
CMTM1-216ENST00000533078 KCNK5O95279 499 aa12.49□□□□□ -0.41
CMTM1-216ENST00000533078 CYP11A1P05108 521 aa12.49□□□□□ -0.41
CMTM1-216ENST00000533078 PLA2G4BP0C869 781 aa12.49□□□□□ -0.41
CMTM1-216ENST00000533078 U2AF2P26368 475 aaKnown RBP eCLIP12.49□□□□□ -0.41
CMTM1-216ENST00000533078 TNFSF9P41273 254 aa12.49□□□□□ -0.41
CMTM1-216ENST00000533078 TAF6P49848 677 aa12.49□□□□□ -0.41
CMTM1-216ENST00000533078 GUCY2FP51841 1108 aa12.49□□□□□ -0.41
CMTM1-216ENST00000533078 NCKAP1LP55160 1127 aa12.49□□□□□ -0.41
CMTM1-216ENST00000533078 TSPY1Q01534 308 aa12.49□□□□□ -0.41
CMTM1-216ENST00000533078 CACNB1Q02641 598 aaPredicted RBP12.49□□□□□ -0.41
CMTM1-216ENST00000533078 C9orf57Q5W0N0 161 aa12.49□□□□□ -0.41
CMTM1-216ENST00000533078 JADE1Q6IE81 842 aa12.49□□□□□ -0.41
CMTM1-216ENST00000533078 PSAPL1Q6NUJ1 521 aa12.49□□□□□ -0.41
CMTM1-216ENST00000533078 CPA6Q8N4T0 437 aa12.49□□□□□ -0.41
CMTM1-216ENST00000533078 TTC9BQ8N6N2 239 aa12.49□□□□□ -0.41
CMTM1-216ENST00000533078 MAB21L3Q8N8X9 362 aa12.49□□□□□ -0.41
CMTM1-216ENST00000533078 GIPC2Q8TF65 315 aa12.49□□□□□ -0.41
CMTM1-216ENST00000533078 ZC3H10Q96K80 434 aaKnown RBP12.49□□□□□ -0.41
CMTM1-216ENST00000533078 EDEM2Q9BV94 578 aa12.49□□□□□ -0.41
CMTM1-216ENST00000533078 LSM14BQ9BX40 385 aaKnown RBP12.49□□□□□ -0.41
CMTM1-216ENST00000533078 ZCWPW1Q9H0M4 648 aa12.49□□□□□ -0.41
CMTM1-216ENST00000533078 SMG9Q9H0W8 520 aaKnown RBP12.49□□□□□ -0.41
CMTM1-216ENST00000533078 EBF3Q9H4W6 596 aa12.49□□□□□ -0.41
CMTM1-216ENST00000533078 TDP1Q9NUW8 608 aa12.49□□□□□ -0.41
CMTM1-216ENST00000533078 UXTQ9UBK9 157 aaPredicted RBP12.49□□□□□ -0.41
CMTM1-216ENST00000533078 FAM208BQ5VWN6 2430 aa12.48□□□□□ -0.41
CMTM1-216ENST00000533078 SOBPA7XYQ1 873 aa12.48□□□□□ -0.41
CMTM1-216ENST00000533078 APBB3O95704 486 aa12.48□□□□□ -0.41
CMTM1-216ENST00000533078 CAVIN2O95810 425 aa12.48□□□□□ -0.41
CMTM1-216ENST00000533078 GBP1P32455 592 aa12.48□□□□□ -0.41
CMTM1-216ENST00000533078 CREB5Q02930 508 aa12.48□□□□□ -0.41
CMTM1-216ENST00000533078 NR1H3Q13133 447 aa12.48□□□□□ -0.41
CMTM1-216ENST00000533078 PSMD2Q13200 908 aa12.48□□□□□ -0.41
CMTM1-216ENST00000533078 NFE2Q16621 373 aaPredicted RBP12.48□□□□□ -0.41
CMTM1-216ENST00000533078 SV2CQ496J9 727 aa12.48□□□□□ -0.41
CMTM1-216ENST00000533078 RILPL1Q5EBL4 403 aa12.48□□□□□ -0.41
CMTM1-216ENST00000533078 WDR44Q5JSH3 913 aa12.48□□□□□ -0.41
CMTM1-216ENST00000533078 PLA2G2CQ5R387 149 aa12.48□□□□□ -0.41
CMTM1-216ENST00000533078 HYIQ5T013 277 aa12.48□□□□□ -0.41
CMTM1-216ENST00000533078 MCTP1Q6DN14 999 aa12.48□□□□□ -0.41
CMTM1-216ENST00000533078 FSTL4Q6MZW2 842 aa12.48□□□□□ -0.41
CMTM1-216ENST00000533078 KCNK18Q7Z418 384 aa12.48□□□□□ -0.41
CMTM1-216ENST00000533078 MYCT1Q8N699 235 aa12.48□□□□□ -0.41
CMTM1-216ENST00000533078 TTC16Q8NEE8 873 aa12.48□□□□□ -0.41
CMTM1-216ENST00000533078 OR10T2Q8NGX3 314 aa12.48□□□□□ -0.41
CMTM1-216ENST00000533078 RASSF8Q8NHQ8 419 aa12.48□□□□□ -0.41
CMTM1-216ENST00000533078 CALML4Q96GE6 196 aa12.48□□□□□ -0.41
CMTM1-216ENST00000533078 ZNF560Q96MR9 790 aa12.48□□□□□ -0.41
CMTM1-216ENST00000533078 HHIPQ96QV1 700 aa12.48□□□□□ -0.41
CMTM1-216ENST00000533078 P2RY13Q9BPV8 354 aa12.48□□□□□ -0.41
CMTM1-216ENST00000533078 FAM83CQ9BQN1 747 aa12.48□□□□□ -0.41
CMTM1-216ENST00000533078 PYM1Q9BRP8 204 aaKnown RBP12.48□□□□□ -0.41
CMTM1-216ENST00000533078 SLC46A2Q9BY10 475 aa12.48□□□□□ -0.41
CMTM1-216ENST00000533078 ZHX3Q9H4I2 956 aa12.48□□□□□ -0.41
CMTM1-216ENST00000533078 PARVGQ9HBI0 331 aa12.48□□□□□ -0.41
CMTM1-216ENST00000533078 TBX20Q9UMR3 447 aa12.48□□□□□ -0.41
CMTM1-216ENST00000533078 MAGED2Q9UNF1 606 aaPredicted RBP12.48□□□□□ -0.41
CMTM1-216ENST00000533078 PCDHB5Q9Y5E4 795 aa12.48□□□□□ -0.41
CMTM1-216ENST00000533078 TULP1O00294 542 aaPredicted RBP12.47□□□□□ -0.41
CMTM1-216ENST00000533078 PPEF2O14830 753 aa12.47□□□□□ -0.41
CMTM1-216ENST00000533078 TM4SF5O14894 197 aa12.47□□□□□ -0.41
CMTM1-216ENST00000533078 TBCAO75347 108 aaKnown RBP12.47□□□□□ -0.41
CMTM1-216ENST00000533078 EGFP01133 1207 aa12.47□□□□□ -0.41
CMTM1-216ENST00000533078 NEFLP07196 543 aa12.47□□□□□ -0.41
CMTM1-216ENST00000533078 PROS1P07225 676 aa12.47□□□□□ -0.41
CMTM1-216ENST00000533078 CSH1P0DML2 217 aa12.47□□□□□ -0.41
CMTM1-216ENST00000533078 CSH2P0DML3 217 aa12.47□□□□□ -0.41
CMTM1-216ENST00000533078 ATF6P18850 670 aa12.47□□□□□ -0.41
CMTM1-216ENST00000533078 IFNAR2P48551 515 aa12.47□□□□□ -0.41
CMTM1-216ENST00000533078 NOVA1P51513 510 aaKnown RBP12.47□□□□□ -0.41
CMTM1-216ENST00000533078 SLC12A3P55017 1021 aa12.47□□□□□ -0.41
CMTM1-216ENST00000533078 ST3GAL1Q11201 340 aa12.47□□□□□ -0.41
CMTM1-216ENST00000533078 PLK5Q496M5 336 aa12.47□□□□□ -0.41
CMTM1-216ENST00000533078 TRIM68Q6AZZ1 485 aa12.47□□□□□ -0.41
CMTM1-216ENST00000533078 ADALQ6DHV7 355 aa12.47□□□□□ -0.41
CMTM1-216ENST00000533078 SLFN12LQ6IEE8 588 aa12.47□□□□□ -0.41
CMTM1-216ENST00000533078 RPLP0P6Q8NHW5 317 aa12.47□□□□□ -0.41
CMTM1-216ENST00000533078 ATP2A3Q93084 1043 aa12.47□□□□□ -0.41
CMTM1-216ENST00000533078 PLIN2Q99541 437 aa12.47□□□□□ -0.41
CMTM1-216ENST00000533078 MMTAG2Q9BU76 263 aaKnown RBP12.47□□□□□ -0.41
CMTM1-216ENST00000533078 HAPLN2Q9GZV7 340 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms