RNA–Protein interactions for RNA: ENST00000532661.5

LTBP3-220, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 3

Gene LTBP3, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-220ENST00000532661 ZNF233A6NK53 670 aa24.77■■□□□ 1.56
LTBP3-220ENST00000532661 HEPACAM2A8MVW5 462 aa24.77■■□□□ 1.56
LTBP3-220ENST00000532661 KIAA0391O15091 583 aaKnown RBP24.77■■□□□ 1.56
LTBP3-220ENST00000532661 EIF3DO15371 548 aaKnown RBP eCLIP24.77■■□□□ 1.56
LTBP3-220ENST00000532661 TMEM191BP0C7N4 346 aa24.77■■□□□ 1.56
LTBP3-220ENST00000532661 HAPLN1P10915 354 aaPredicted RBP24.77■■□□□ 1.56
LTBP3-220ENST00000532661 PSMC3P17980 439 aa24.77■■□□□ 1.56
LTBP3-220ENST00000532661 TARSP26639 723 aaKnown RBP24.77■■□□□ 1.56
LTBP3-220ENST00000532661 AFMP43652 599 aa24.77■■□□□ 1.56
LTBP3-220ENST00000532661 RBP5P82980 135 aa24.77■■□□□ 1.56
LTBP3-220ENST00000532661 EHHADHQ08426 723 aa24.77■■□□□ 1.56
LTBP3-220ENST00000532661 UNC13DQ70J99 1090 aa24.77■■□□□ 1.56
LTBP3-220ENST00000532661 OSTM1Q86WC4 334 aa24.77■■□□□ 1.56
LTBP3-220ENST00000532661 C1orf210Q8IVY1 113 aa24.77■■□□□ 1.56
LTBP3-220ENST00000532661 NELFCDQ8IXH7 590 aa24.77■■□□□ 1.56
LTBP3-220ENST00000532661 GRAMD1CQ8IYS0 662 aa24.77■■□□□ 1.56
LTBP3-220ENST00000532661 LRRC52Q8N7C0 313 aa24.77■■□□□ 1.56
LTBP3-220ENST00000532661 DNASE1L2Q92874 299 aa24.77■■□□□ 1.56
LTBP3-220ENST00000532661 CHAMP1Q96JM3 812 aa24.77■■□□□ 1.56
LTBP3-220ENST00000532661 INTS13Q9NVM9 706 aa24.77■■□□□ 1.56
LTBP3-220ENST00000532661 RCOR1Q9UKL0 485 aa24.77■■□□□ 1.56
LTBP3-220ENST00000532661 CLIC2O15247 247 aa24.76■■□□□ 1.55
LTBP3-220ENST00000532661 HUS1O60921 280 aa24.76■■□□□ 1.55
LTBP3-220ENST00000532661 ACAT1P24752 427 aaKnown RBP24.76■■□□□ 1.55
LTBP3-220ENST00000532661 CUL4BQ13620 913 aa24.76■■□□□ 1.55
LTBP3-220ENST00000532661 ATL3Q6DD88 541 aa24.76■■□□□ 1.55
LTBP3-220ENST00000532661 ITIH5Q86UX2 942 aa24.76■■□□□ 1.55
LTBP3-220ENST00000532661 MFSD6LQ8IWD5 586 aa24.76■■□□□ 1.55
LTBP3-220ENST00000532661 DCP1BQ8IZD4 617 aaKnown RBP24.76■■□□□ 1.55
LTBP3-220ENST00000532661 RDH13Q8NBN7 331 aa24.76■■□□□ 1.55
LTBP3-220ENST00000532661 SPPL2BQ8TCT7 592 aa24.76■■□□□ 1.55
LTBP3-220ENST00000532661 C2orf15Q8WU43 125 aaKnown RBP24.76■■□□□ 1.55
LTBP3-220ENST00000532661 DEPDC1BQ8WUY9 529 aa24.76■■□□□ 1.55
LTBP3-220ENST00000532661 SCFD1Q8WVM8 642 aa24.76■■□□□ 1.55
LTBP3-220ENST00000532661 MAGEF1Q9HAY2 307 aa24.76■■□□□ 1.55
LTBP3-220ENST00000532661 IL21Q9HBE4 155 aa24.76■■□□□ 1.55
LTBP3-220ENST00000532661 AGPAT3Q9NRZ7 376 aa24.76■■□□□ 1.55
LTBP3-220ENST00000532661 DDX43Q9NXZ2 648 aaKnown RBP24.76■■□□□ 1.55
LTBP3-220ENST00000532661 CFAP45Q9UL16 551 aa24.76■■□□□ 1.55
LTBP3-220ENST00000532661 SNX9Q9Y5X1 595 aa24.76■■□□□ 1.55
LTBP3-220ENST00000532661 HCRTO43612 131 aa24.75■■□□□ 1.55
LTBP3-220ENST00000532661 CYP4F8P98187 520 aa24.75■■□□□ 1.55
LTBP3-220ENST00000532661 VEPH1Q14D04 833 aa24.75■■□□□ 1.55
LTBP3-220ENST00000532661 CCDC142Q17RM4 750 aa24.75■■□□□ 1.55
LTBP3-220ENST00000532661 GPR158Q5T848 1215 aa24.75■■□□□ 1.55
LTBP3-220ENST00000532661 ZNF852Q6ZMS4 543 aa24.75■■□□□ 1.55
LTBP3-220ENST00000532661 ARID3BQ8IVW6 561 aaPredicted RBP24.75■■□□□ 1.55
LTBP3-220ENST00000532661 MAML2Q8IZL2 1156 aaPredicted RBP24.75■■□□□ 1.55
LTBP3-220ENST00000532661 IRF7Q92985 503 aa24.75■■□□□ 1.55
LTBP3-220ENST00000532661 NKD2Q969F2 451 aaPredicted RBP24.75■■□□□ 1.55
LTBP3-220ENST00000532661 ANKRD36BP1Q96IX9 119 aa24.75■■□□□ 1.55
LTBP3-220ENST00000532661 BCO2Q9BYV7 579 aa24.75■■□□□ 1.55
LTBP3-220ENST00000532661 OSBPL6Q9BZF3 934 aa24.75■■□□□ 1.55
LTBP3-220ENST00000532661 SLC39A2Q9NP94 309 aa24.75■■□□□ 1.55
LTBP3-220ENST00000532661 GDAP2Q9NXN4 497 aa24.75■■□□□ 1.55
LTBP3-220ENST00000532661 SERTAD1Q9UHV2 236 aa24.75■■□□□ 1.55
LTBP3-220ENST00000532661 PCDHB5Q9Y5E4 795 aa24.75■■□□□ 1.55
LTBP3-220ENST00000532661 R4GN57 208 aa24.75■■□□□ 1.55
LTBP3-220ENST00000532661 ZNF263O14978 683 aa24.74■■□□□ 1.55
LTBP3-220ENST00000532661 SP9P0CG40 484 aa24.74■■□□□ 1.55
LTBP3-220ENST00000532661 GPR15P49685 360 aa24.74■■□□□ 1.55
LTBP3-220ENST00000532661 TSPY1Q01534 308 aa24.74■■□□□ 1.55
LTBP3-220ENST00000532661 SMARCB1Q12824 385 aa24.74■■□□□ 1.55
LTBP3-220ENST00000532661 STKLD1Q8NE28 680 aa24.74■■□□□ 1.55
LTBP3-220ENST00000532661 LRRC3BQ96PB8 259 aa24.74■■□□□ 1.55
LTBP3-220ENST00000532661 PI4K2AQ9BTU6 479 aa24.74■■□□□ 1.55
LTBP3-220ENST00000532661 SPATA6Q9NWH7 488 aaPredicted RBP24.74■■□□□ 1.55
LTBP3-220ENST00000532661 CYP2J2P51589 502 aa24.73■■□□□ 1.55
LTBP3-220ENST00000532661 FZD5Q13467 585 aa24.73■■□□□ 1.55
LTBP3-220ENST00000532661 SOWAHAQ2M3V2 549 aa24.73■■□□□ 1.55
LTBP3-220ENST00000532661 SDHAF4Q5VUM1 108 aa24.73■■□□□ 1.55
LTBP3-220ENST00000532661 ACBD6Q9BR61 282 aa24.73■■□□□ 1.55
LTBP3-220ENST00000532661 NDRG2Q9UN36 371 aaKnown RBP24.73■■□□□ 1.55
LTBP3-220ENST00000532661 ZDHHC9Q9Y397 364 aa24.73■■□□□ 1.55
LTBP3-220ENST00000532661 TCHHQ07283 1943 aa24.73■■□□□ 1.55
LTBP3-220ENST00000532661 CFAP54Q96N23 3096 aa24.72■■□□□ 1.55
LTBP3-220ENST00000532661 ARNTLO00327 626 aa24.72■■□□□ 1.55
LTBP3-220ENST00000532661 PRPF40AO75400 957 aaKnown RBP24.72■■□□□ 1.55
LTBP3-220ENST00000532661 FGF19O95750 216 aa24.72■■□□□ 1.55
LTBP3-220ENST00000532661 TNNC2P02585 160 aa24.72■■□□□ 1.55
LTBP3-220ENST00000532661 MYL7Q01449 175 aa24.72■■□□□ 1.55
LTBP3-220ENST00000532661 SURF1Q15526 300 aa24.72■■□□□ 1.55
LTBP3-220ENST00000532661 TAF12Q16514 161 aa24.72■■□□□ 1.55
LTBP3-220ENST00000532661 SNRNP35Q16560 246 aaKnown RBP24.72■■□□□ 1.55
LTBP3-220ENST00000532661 DUOXA2Q1HG44 320 aa24.72■■□□□ 1.55
LTBP3-220ENST00000532661 INTS6LQ5JSJ4 861 aaKnown RBP24.72■■□□□ 1.55
LTBP3-220ENST00000532661 ADGRF2Q8IZF7 708 aa24.72■■□□□ 1.55
LTBP3-220ENST00000532661 TMEM86AQ8N2M4 240 aa24.72■■□□□ 1.55
LTBP3-220ENST00000532661 TOP6BLQ8N6T0 577 aa24.72■■□□□ 1.55
LTBP3-220ENST00000532661 E2F7Q96AV8 911 aa24.72■■□□□ 1.55
LTBP3-220ENST00000532661 CLDN23Q96B33 292 aa24.72■■□□□ 1.55
LTBP3-220ENST00000532661 HPDLQ96IR7 371 aa24.72■■□□□ 1.55
LTBP3-220ENST00000532661 NELL2Q99435 816 aa24.72■■□□□ 1.55
LTBP3-220ENST00000532661 PKMYT1Q99640 499 aa24.72■■□□□ 1.55
LTBP3-220ENST00000532661 KIAA1586Q9HCI6 787 aa24.72■■□□□ 1.55
LTBP3-220ENST00000532661 TRPV5Q9NQA5 729 aa24.72■■□□□ 1.55
LTBP3-220ENST00000532661 GTF3C4Q9UKN8 822 aa24.72■■□□□ 1.55
LTBP3-220ENST00000532661 PVALEFA0A1B0GWK0 134 aa24.71■■□□□ 1.55
LTBP3-220ENST00000532661 PRAMEF12O95522 483 aa24.71■■□□□ 1.55
LTBP3-220ENST00000532661 HMGA1P17096 107 aaKnown RBP24.71■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms