RNA–Protein interactions for RNA: ENST00000532504.5

PPFIA1-222, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 1 (best)

Gene PPFIA1, Length 5,159 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-222ENST00000532504 EEF1DP3Q658K8 133 aa16.52■□□□□ 0.24
PPFIA1-222ENST00000532504 NXNQ6DKJ4 435 aa16.52■□□□□ 0.24
PPFIA1-222ENST00000532504 MSL3Q8N5Y2 521 aaKnown RBP16.52■□□□□ 0.24
PPFIA1-222ENST00000532504 EXT2Q93063 718 aa16.52■□□□□ 0.24
PPFIA1-222ENST00000532504 OSBPL9Q96SU4 736 aa16.52■□□□□ 0.24
PPFIA1-222ENST00000532504 APOL5Q9BWW9 433 aa16.52■□□□□ 0.24
PPFIA1-222ENST00000532504 FTHL17Q9BXU8 183 aa16.52■□□□□ 0.24
PPFIA1-222ENST00000532504 CDT1Q9H211 546 aa16.52■□□□□ 0.24
PPFIA1-222ENST00000532504 SARS2Q9NP81 518 aaKnown RBP16.52■□□□□ 0.24
PPFIA1-222ENST00000532504 SLC12A8A0AV02 714 aa16.52■□□□□ 0.24
PPFIA1-222ENST00000532504 CYP11B1P15538 503 aa16.52■□□□□ 0.24
PPFIA1-222ENST00000532504 CTCFP49711 727 aaPredicted RBP16.52■□□□□ 0.24
PPFIA1-222ENST00000532504 NAB2Q15742 525 aa16.52■□□□□ 0.24
PPFIA1-222ENST00000532504 ITPRIPL1Q6GPH6 555 aa16.52■□□□□ 0.24
PPFIA1-222ENST00000532504 OR6P1Q8NGX9 317 aa16.52■□□□□ 0.24
PPFIA1-222ENST00000532504 SENP8Q96LD8 212 aa16.52■□□□□ 0.24
PPFIA1-222ENST00000532504 WDCPQ9H6R7 721 aa16.52■□□□□ 0.24
PPFIA1-222ENST00000532504 TMEM134Q9H6X4 195 aa16.52■□□□□ 0.24
PPFIA1-222ENST00000532504 TRMT13Q9NUP7 481 aaKnown RBP16.52■□□□□ 0.24
PPFIA1-222ENST00000532504 TSR3Q9UJK0 312 aaKnown RBP16.52■□□□□ 0.24
PPFIA1-222ENST00000532504 VAV3Q9UKW4 847 aa16.52■□□□□ 0.24
PPFIA1-222ENST00000532504 EPHB2P29323 1055 aa16.52■□□□□ 0.23
PPFIA1-222ENST00000532504 SLC1A1P43005 524 aa16.52■□□□□ 0.23
PPFIA1-222ENST00000532504 PTENP60484 403 aa16.52■□□□□ 0.23
PPFIA1-222ENST00000532504 APBA1Q02410 837 aa16.52■□□□□ 0.23
PPFIA1-222ENST00000532504 SLMAPQ14BN4 828 aa16.52■□□□□ 0.23
PPFIA1-222ENST00000532504 TSPYL2Q9H2G4 693 aaPredicted RBP16.52■□□□□ 0.23
PPFIA1-222ENST00000532504 PLIN4Q96Q06 1357 aa16.52■□□□□ 0.23
PPFIA1-222ENST00000532504 ITIH6Q6UXX5 1313 aa16.52■□□□□ 0.23
PPFIA1-222ENST00000532504 CA4P22748 312 aa16.51■□□□□ 0.23
PPFIA1-222ENST00000532504 PPARGP37231 505 aaPredicted RBP16.51■□□□□ 0.23
PPFIA1-222ENST00000532504 TNFSF9P41273 254 aa16.51■□□□□ 0.23
PPFIA1-222ENST00000532504 TKTL1P51854 596 aa16.51■□□□□ 0.23
PPFIA1-222ENST00000532504 SLC47A2Q86VL8 602 aa16.51■□□□□ 0.23
PPFIA1-222ENST00000532504 EXOC4Q96A65 974 aa16.51■□□□□ 0.23
PPFIA1-222ENST00000532504 HDAC11Q96DB2 347 aa16.51■□□□□ 0.23
PPFIA1-222ENST00000532504 ATXN3LQ9H3M9 355 aa16.51■□□□□ 0.23
PPFIA1-222ENST00000532504 DPP7Q9UHL4 492 aa16.51■□□□□ 0.23
PPFIA1-222ENST00000532504 TNFSF13BQ9Y275 285 aa16.51■□□□□ 0.23
PPFIA1-222ENST00000532504 LRRIQ3A6PVS8 624 aaPredicted RBP16.51■□□□□ 0.23
PPFIA1-222ENST00000532504 NFICP08651 508 aa16.51■□□□□ 0.23
PPFIA1-222ENST00000532504 SELPP16109 830 aa16.51■□□□□ 0.23
PPFIA1-222ENST00000532504 SLC11A2P49281 568 aa16.51■□□□□ 0.23
PPFIA1-222ENST00000532504 KCTD16Q68DU8 428 aa16.51■□□□□ 0.23
PPFIA1-222ENST00000532504 EDEM1Q92611 657 aa16.51■□□□□ 0.23
PPFIA1-222ENST00000532504 FMO2Q99518 471 aa16.51■□□□□ 0.23
PPFIA1-222ENST00000532504 TRIM56Q9BRZ2 755 aaKnown RBP16.51■□□□□ 0.23
PPFIA1-222ENST00000532504 CYP3A43Q9HB55 503 aa16.51■□□□□ 0.23
PPFIA1-222ENST00000532504 TFR2Q9UP52 801 aa16.51■□□□□ 0.23
PPFIA1-222ENST00000532504 RPTORQ8N122 1335 aa16.51■□□□□ 0.23
PPFIA1-222ENST00000532504 KCNN4O15554 427 aa16.51■□□□□ 0.23
PPFIA1-222ENST00000532504 ATP1A2P50993 1020 aa16.51■□□□□ 0.23
PPFIA1-222ENST00000532504 E2F4Q16254 413 aa16.51■□□□□ 0.23
PPFIA1-222ENST00000532504 FEZF2Q8TBJ5 459 aa16.51■□□□□ 0.23
PPFIA1-222ENST00000532504 RNPC3Q96LT9 517 aaKnown RBP16.51■□□□□ 0.23
PPFIA1-222ENST00000532504 CREBZFQ9NS37 354 aa16.51■□□□□ 0.23
PPFIA1-222ENST00000532504 KIAA1257Q9ULG3 409 aa16.51■□□□□ 0.23
PPFIA1-222ENST00000532504 TRAF3IP3Q9Y228 551 aa16.51■□□□□ 0.23
PPFIA1-222ENST00000532504 CCDC78A2IDD5 438 aa16.51■□□□□ 0.23
PPFIA1-222ENST00000532504 CCDC188H7C350 402 aa16.51■□□□□ 0.23
PPFIA1-222ENST00000532504 BARX2Q9UMQ3 279 aaPredicted RBP16.51■□□□□ 0.23
PPFIA1-222ENST00000532504 ATP9BO43861 1147 aa16.5■□□□□ 0.23
PPFIA1-222ENST00000532504 SP100P23497 879 aaPredicted RBP16.5■□□□□ 0.23
PPFIA1-222ENST00000532504 BTBD6Q96KE9 485 aa16.5■□□□□ 0.23
PPFIA1-222ENST00000532504 CALR3Q96L12 384 aaKnown RBP16.5■□□□□ 0.23
PPFIA1-222ENST00000532504 MRPL17Q9NRX2 175 aaKnown RBP16.5■□□□□ 0.23
PPFIA1-222ENST00000532504 CDR2Q01850 454 aa16.5■□□□□ 0.23
PPFIA1-222ENST00000532504 MYBPC2Q14324 1141 aa16.5■□□□□ 0.23
PPFIA1-222ENST00000532504 SDE2Q6IQ49 451 aa16.5■□□□□ 0.23
PPFIA1-222ENST00000532504 TAS2R42Q7RTR8 314 aa16.5■□□□□ 0.23
PPFIA1-222ENST00000532504 RBM23Q86U06 439 aaKnown RBP16.5■□□□□ 0.23
PPFIA1-222ENST00000532504 NPLOC4Q8TAT6 608 aa16.5■□□□□ 0.23
PPFIA1-222ENST00000532504 THAP2Q9H0W7 228 aa16.5■□□□□ 0.23
PPFIA1-222ENST00000532504 TRPV6Q9H1D0 765 aa16.5■□□□□ 0.23
PPFIA1-222ENST00000532504 EXOC1LA0A1B0GW35 172 aa16.5■□□□□ 0.23
PPFIA1-222ENST00000532504 ARL4CP56559 192 aa16.5■□□□□ 0.23
PPFIA1-222ENST00000532504 PSMD6Q15008 389 aa16.5■□□□□ 0.23
PPFIA1-222ENST00000532504 PPM1LQ5SGD2 360 aa16.5■□□□□ 0.23
PPFIA1-222ENST00000532504 CCDC121Q6ZUS5 278 aa16.5■□□□□ 0.23
PPFIA1-222ENST00000532504 TC2NQ8N9U0 490 aa16.5■□□□□ 0.23
PPFIA1-222ENST00000532504 MORC4Q8TE76 937 aa16.5■□□□□ 0.23
PPFIA1-222ENST00000532504 CFAP57Q96MR6 1250 aa16.5■□□□□ 0.23
PPFIA1-222ENST00000532504 CERS4Q9HA82 394 aa16.5■□□□□ 0.23
PPFIA1-222ENST00000532504 RNF186Q9NXI6 227 aa16.5■□□□□ 0.23
PPFIA1-222ENST00000532504 NOC2LQ9Y3T9 749 aaKnown RBP16.5■□□□□ 0.23
PPFIA1-222ENST00000532504 TLL2Q9Y6L7 1015 aa16.5■□□□□ 0.23
PPFIA1-222ENST00000532504 NHSL1Q5SYE7 1610 aa16.5■□□□□ 0.23
PPFIA1-222ENST00000532504 PAMP19021 973 aa16.5■□□□□ 0.23
PPFIA1-222ENST00000532504 COMTP21964 271 aa16.5■□□□□ 0.23
PPFIA1-222ENST00000532504 ATP6V0D2Q8N8Y2 350 aa16.5■□□□□ 0.23
PPFIA1-222ENST00000532504 CEP120Q8N960 986 aa16.5■□□□□ 0.23
PPFIA1-222ENST00000532504 ACO2Q99798 780 aaKnown RBP16.5■□□□□ 0.23
PPFIA1-222ENST00000532504 NXF3Q9H4D5 531 aaKnown RBP16.5■□□□□ 0.23
PPFIA1-222ENST00000532504 NFU1Q9UMS0 254 aa16.5■□□□□ 0.23
PPFIA1-222ENST00000532504 ATP1A1P05023 1023 aaKnown RBP16.49■□□□□ 0.23
PPFIA1-222ENST00000532504 IRX4P78413 519 aa16.49■□□□□ 0.23
PPFIA1-222ENST00000532504 TWF1Q12792 350 aa16.49■□□□□ 0.23
PPFIA1-222ENST00000532504 WSCD1Q658N2 575 aa16.49■□□□□ 0.23
PPFIA1-222ENST00000532504 ACAD10Q6JQN1 1059 aa16.49■□□□□ 0.23
PPFIA1-222ENST00000532504 SLC2A14Q8TDB8 520 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms