RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 SSX2IPQ9Y2D8 614 aa13.39□□□□□ -0.27
COPB1-208ENST00000532088 SNX9Q9Y5X1 595 aa13.39□□□□□ -0.27
COPB1-208ENST00000532088 NLRC5Q86WI3 1866 aa13.38□□□□□ -0.27
COPB1-208ENST00000532088 NT5C1B-RDH14C9J2C7 533 aa13.38□□□□□ -0.27
COPB1-208ENST00000532088 CYB561D2O14569 222 aa13.38□□□□□ -0.27
COPB1-208ENST00000532088 AP5Z1O43299 807 aa13.38□□□□□ -0.27
COPB1-208ENST00000532088 FGF18O76093 207 aa13.38□□□□□ -0.27
COPB1-208ENST00000532088 ITGB1P05556 798 aa13.38□□□□□ -0.27
COPB1-208ENST00000532088 MYOGP15173 224 aa13.38□□□□□ -0.27
COPB1-208ENST00000532088 UCHL3P15374 230 aa13.38□□□□□ -0.27
COPB1-208ENST00000532088 WARSP23381 471 aaKnown RBP13.38□□□□□ -0.27
COPB1-208ENST00000532088 CDC25BP30305 580 aa13.38□□□□□ -0.27
COPB1-208ENST00000532088 BRCC3P46736 316 aa13.38□□□□□ -0.27
COPB1-208ENST00000532088 LHX1P48742 406 aa13.38□□□□□ -0.27
COPB1-208ENST00000532088 ZNF75DP51815 510 aa13.38□□□□□ -0.27
COPB1-208ENST00000532088 MFAP3P55082 362 aa13.38□□□□□ -0.27
COPB1-208ENST00000532088 INCA1Q0VD86 236 aa13.38□□□□□ -0.27
COPB1-208ENST00000532088 TRIM14Q14142 442 aa13.38□□□□□ -0.27
COPB1-208ENST00000532088 MRPL58Q14197 206 aaKnown RBP13.38□□□□□ -0.27
COPB1-208ENST00000532088 SOWAHAQ2M3V2 549 aa13.38□□□□□ -0.27
COPB1-208ENST00000532088 USP41Q3LFD5 358 aa13.38□□□□□ -0.27
COPB1-208ENST00000532088 PHLDB3Q6NSJ2 640 aa13.38□□□□□ -0.27
COPB1-208ENST00000532088 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.38□□□□□ -0.27
COPB1-208ENST00000532088 TMEM173Q86WV6 379 aaPredicted RBP13.38□□□□□ -0.27
COPB1-208ENST00000532088 FMNL3Q8IVF7 1028 aa13.38□□□□□ -0.27
COPB1-208ENST00000532088 VSTM4Q8IW00 320 aa13.38□□□□□ -0.27
COPB1-208ENST00000532088 TMEM130Q8N3G9 435 aa13.38□□□□□ -0.27
COPB1-208ENST00000532088 KLHL23Q8NBE8 558 aa13.38□□□□□ -0.27
COPB1-208ENST00000532088 NEK11Q8NG66 645 aa13.38□□□□□ -0.27
COPB1-208ENST00000532088 BCL7CQ8WUZ0 217 aaPredicted RBP13.38□□□□□ -0.27
COPB1-208ENST00000532088 LSM14BQ9BX40 385 aaKnown RBP13.38□□□□□ -0.27
COPB1-208ENST00000532088 NAA15Q9BXJ9 866 aaKnown RBP13.38□□□□□ -0.27
COPB1-208ENST00000532088 DNAI2Q9GZS0 605 aa13.38□□□□□ -0.27
COPB1-208ENST00000532088 LMAN2LQ9H0V9 348 aa13.38□□□□□ -0.27
COPB1-208ENST00000532088 GANQ9H2C0 597 aa13.38□□□□□ -0.27
COPB1-208ENST00000532088 NKX2-4Q9H2Z4 354 aa13.38□□□□□ -0.27
COPB1-208ENST00000532088 CHST7Q9NS84 486 aa13.38□□□□□ -0.27
COPB1-208ENST00000532088 MYO6Q9UM54 1294 aa13.38□□□□□ -0.27
COPB1-208ENST00000532088 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.38□□□□□ -0.27
COPB1-208ENST00000532088 A0A1W2PQJ5 194 aa13.37□□□□□ -0.27
COPB1-208ENST00000532088 F8W810 466 aa13.37□□□□□ -0.27
COPB1-208ENST00000532088 H3BNC9 293 aa13.37□□□□□ -0.27
COPB1-208ENST00000532088 GABRDO14764 452 aa13.37□□□□□ -0.27
COPB1-208ENST00000532088 LRRN2O75325 713 aa13.37□□□□□ -0.27
COPB1-208ENST00000532088 NOL4O94818 638 aa13.37□□□□□ -0.27
COPB1-208ENST00000532088 ARHGEF15O94989 841 aa13.37□□□□□ -0.27
COPB1-208ENST00000532088 OAZ2O95190 189 aa13.37□□□□□ -0.27
COPB1-208ENST00000532088 PBX3P40426 434 aa13.37□□□□□ -0.27
COPB1-208ENST00000532088 CREMQ03060 361 aa13.37□□□□□ -0.27
COPB1-208ENST00000532088 BMS1Q14692 1282 aaKnown RBP13.37□□□□□ -0.27
COPB1-208ENST00000532088 SPECC1LQ69YQ0 1117 aa13.37□□□□□ -0.27
COPB1-208ENST00000532088 SPOPLQ6IQ16 392 aa13.37□□□□□ -0.27
COPB1-208ENST00000532088 PDE12Q6L8Q7 609 aaKnown RBP13.37□□□□□ -0.27
COPB1-208ENST00000532088 ANKS3Q6ZW76 656 aa13.37□□□□□ -0.27
COPB1-208ENST00000532088 UNC93AQ86WB7 457 aa13.37□□□□□ -0.27
COPB1-208ENST00000532088 METTL23Q86XA0 190 aa13.37□□□□□ -0.27
COPB1-208ENST00000532088 PPM1KQ8N3J5 372 aa13.37□□□□□ -0.27
COPB1-208ENST00000532088 PDCL2Q8N4E4 241 aa13.37□□□□□ -0.27
COPB1-208ENST00000532088 UBR7Q8N806 425 aa13.37□□□□□ -0.27
COPB1-208ENST00000532088 HASPINQ8TF76 798 aa13.37□□□□□ -0.27
COPB1-208ENST00000532088 PIK3R5Q8WYR1 880 aa13.37□□□□□ -0.27
COPB1-208ENST00000532088 C17orf80Q9BSJ5 609 aa13.37□□□□□ -0.27
COPB1-208ENST00000532088 TTPALQ9BTX7 342 aa13.37□□□□□ -0.27
COPB1-208ENST00000532088 GPR62Q9BZJ7 368 aa13.37□□□□□ -0.27
COPB1-208ENST00000532088 TTYH3Q9C0H2 523 aa13.37□□□□□ -0.27
COPB1-208ENST00000532088 CEP72Q9P209 647 aa13.37□□□□□ -0.27
COPB1-208ENST00000532088 NXF1Q9UBU9 619 aaKnown RBP13.37□□□□□ -0.27
COPB1-208ENST00000532088 L1RE1Q9UN81 338 aa13.37□□□□□ -0.27
COPB1-208ENST00000532088 CNTN6Q9UQ52 1028 aa13.37□□□□□ -0.27
COPB1-208ENST00000532088 H7C4K7 107 aa13.36□□□□□ -0.27
COPB1-208ENST00000532088 CTSAP10619 480 aa13.36□□□□□ -0.27
COPB1-208ENST00000532088 TRIM21P19474 475 aaKnown RBP13.36□□□□□ -0.27
COPB1-208ENST00000532088 DSG1Q02413 1049 aa13.36□□□□□ -0.27
COPB1-208ENST00000532088 YWHAHQ04917 246 aaPredicted RBP13.36□□□□□ -0.27
COPB1-208ENST00000532088 FAM171A1Q5VUB5 890 aa13.36□□□□□ -0.27
COPB1-208ENST00000532088 ARHGEF19Q8IW93 802 aa13.36□□□□□ -0.27
COPB1-208ENST00000532088 ADGRF2Q8IZF7 708 aa13.36□□□□□ -0.27
COPB1-208ENST00000532088 SPPL3Q8TCT6 385 aa13.36□□□□□ -0.27
COPB1-208ENST00000532088 RABGGTAQ92696 567 aa13.36□□□□□ -0.27
COPB1-208ENST00000532088 MMS19Q96T76 1030 aa13.36□□□□□ -0.27
COPB1-208ENST00000532088 VN1R3Q9BXE9 311 aa13.36□□□□□ -0.27
COPB1-208ENST00000532088 STK33Q9BYT3 514 aa13.36□□□□□ -0.27
COPB1-208ENST00000532088 ZBP1Q9H171 429 aa13.36□□□□□ -0.27
COPB1-208ENST00000532088 UBE2TQ9NPD8 197 aaPredicted RBP13.36□□□□□ -0.27
COPB1-208ENST00000532088 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.36□□□□□ -0.27
COPB1-208ENST00000532088 FAM207AQ9NSI2 230 aaPredicted RBP13.36□□□□□ -0.27
COPB1-208ENST00000532088 DNAJC12Q9UKB3 198 aa13.36□□□□□ -0.27
COPB1-208ENST00000532088 BARX2Q9UMQ3 279 aaPredicted RBP13.36□□□□□ -0.27
COPB1-208ENST00000532088 POLIQ9UNA4 740 aa13.36□□□□□ -0.27
COPB1-208ENST00000532088 BACE2Q9Y5Z0 518 aa13.36□□□□□ -0.27
COPB1-208ENST00000532088 IRAK3Q9Y616 596 aa13.36□□□□□ -0.27
COPB1-208ENST00000532088 TSC2P49815 1807 aa13.35□□□□□ -0.27
COPB1-208ENST00000532088 OR6C75A6NL08 312 aa13.35□□□□□ -0.27
COPB1-208ENST00000532088 CILPO75339 1184 aa13.35□□□□□ -0.27
COPB1-208ENST00000532088 CLSTN1O94985 981 aa13.35□□□□□ -0.27
COPB1-208ENST00000532088 C1RP00736 705 aa13.35□□□□□ -0.27
COPB1-208ENST00000532088 IGFBP6P24592 240 aaPredicted RBP13.35□□□□□ -0.27
COPB1-208ENST00000532088 PCSK1P29120 753 aa13.35□□□□□ -0.27
COPB1-208ENST00000532088 TKTP29401 623 aaKnown RBP13.35□□□□□ -0.27
COPB1-208ENST00000532088 GLUD2P49448 558 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms