RNA–Protein interactions for RNA: ENST00000531504.5

HIPK3-205, Transcript of homeodomain interacting protein kinase 3, humanhuman

TSL 2

Gene HIPK3, Length 591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-205ENST00000531504 IL21Q9HBE4 155 aa21.5■■□□□ 1.03
HIPK3-205ENST00000531504 DDX19AQ9NUU7 478 aaKnown RBP21.5■■□□□ 1.03
HIPK3-205ENST00000531504 KCNG1Q9UIX4 513 aa21.5■■□□□ 1.03
HIPK3-205ENST00000531504 LHX6Q9UPM6 363 aa21.5■■□□□ 1.03
HIPK3-205ENST00000531504 TSC2P49815 1807 aa21.5■■□□□ 1.03
HIPK3-205ENST00000531504 SLC16A4O15374 487 aa21.49■■□□□ 1.03
HIPK3-205ENST00000531504 CLTAP09496 248 aa21.49■■□□□ 1.03
HIPK3-205ENST00000531504 DDX6P26196 483 aaKnown RBP eCLIP21.49■■□□□ 1.03
HIPK3-205ENST00000531504 MATR3P43243 847 aaKnown RBP eCLIP21.49■■□□□ 1.03
HIPK3-205ENST00000531504 SPAG1Q07617 926 aa21.49■■□□□ 1.03
HIPK3-205ENST00000531504 DMC1Q14565 340 aa21.49■■□□□ 1.03
HIPK3-205ENST00000531504 PDGFRLQ15198 375 aa21.49■■□□□ 1.03
HIPK3-205ENST00000531504 TRIM68Q6AZZ1 485 aa21.49■■□□□ 1.03
HIPK3-205ENST00000531504 LRSAM1Q6UWE0 723 aa21.49■■□□□ 1.03
HIPK3-205ENST00000531504 ZPBP2Q6X784 338 aa21.49■■□□□ 1.03
HIPK3-205ENST00000531504 DAW1Q8N136 415 aa21.49■■□□□ 1.03
HIPK3-205ENST00000531504 CCDC26Q8TAB7 109 aa21.49■■□□□ 1.03
HIPK3-205ENST00000531504 CHFRQ96EP1 664 aa21.49■■□□□ 1.03
HIPK3-205ENST00000531504 LRWD1Q9UFC0 647 aa21.49■■□□□ 1.03
HIPK3-205ENST00000531504 KIAA1549LQ6ZVL6 1849 aa21.49■■□□□ 1.03
HIPK3-205ENST00000531504 THADAQ6YHU6 1953 aa21.48■■□□□ 1.03
HIPK3-205ENST00000531504 MYO16Q9Y6X6 1858 aa21.48■■□□□ 1.03
HIPK3-205ENST00000531504 TTC26A0AVF1 554 aa21.48■■□□□ 1.03
HIPK3-205ENST00000531504 FXR2P51116 673 aaKnown RBP eCLIP21.48■■□□□ 1.03
HIPK3-205ENST00000531504 DGKEP52429 567 aa21.48■■□□□ 1.03
HIPK3-205ENST00000531504 RING1Q06587 406 aa21.48■■□□□ 1.03
HIPK3-205ENST00000531504 MCL1Q07820 350 aa21.48■■□□□ 1.03
HIPK3-205ENST00000531504 ZNF174Q15697 407 aa21.48■■□□□ 1.03
HIPK3-205ENST00000531504 USP39Q53GS9 565 aaKnown RBP21.48■■□□□ 1.03
HIPK3-205ENST00000531504 PMS2CLQ68D20 193 aa21.48■■□□□ 1.03
HIPK3-205ENST00000531504 CYP2U1Q7Z449 544 aa21.48■■□□□ 1.03
HIPK3-205ENST00000531504 CPA6Q8N4T0 437 aa21.48■■□□□ 1.03
HIPK3-205ENST00000531504 GTF3C6Q969F1 213 aa21.48■■□□□ 1.03
HIPK3-205ENST00000531504 TSPAN18Q96SJ8 248 aa21.48■■□□□ 1.03
HIPK3-205ENST00000531504 KIF2CQ99661 725 aa21.48■■□□□ 1.03
HIPK3-205ENST00000531504 TIPINQ9BVW5 301 aa21.48■■□□□ 1.03
HIPK3-205ENST00000531504 POLR3BQ9NW08 1133 aaPredicted RBP21.48■■□□□ 1.03
HIPK3-205ENST00000531504 DNM3Q9UQ16 869 aa21.48■■□□□ 1.03
HIPK3-205ENST00000531504 NEUROG3Q9Y4Z2 214 aa21.48■■□□□ 1.03
HIPK3-205ENST00000531504 MYH11P35749 1972 aa21.48■■□□□ 1.03
HIPK3-205ENST00000531504 OTOL1A6NHN0 477 aaPredicted RBP21.47■■□□□ 1.03
HIPK3-205ENST00000531504 TOP3BO95985 862 aaKnown RBP21.47■■□□□ 1.03
HIPK3-205ENST00000531504 ATF6P18850 670 aa21.47■■□□□ 1.03
HIPK3-205ENST00000531504 GALK1P51570 392 aa21.47■■□□□ 1.03
HIPK3-205ENST00000531504 SMTNP53814 917 aa21.47■■□□□ 1.03
HIPK3-205ENST00000531504 ZBTB6Q15916 424 aa21.47■■□□□ 1.03
HIPK3-205ENST00000531504 KYAT1Q16773 422 aa21.47■■□□□ 1.03
HIPK3-205ENST00000531504 SLC39A12Q504Y0 691 aa21.47■■□□□ 1.03
HIPK3-205ENST00000531504 MAB21L3Q8N8X9 362 aa21.47■■□□□ 1.03
HIPK3-205ENST00000531504 NECAB1Q8N987 351 aa21.47■■□□□ 1.03
HIPK3-205ENST00000531504 NSUN7Q8NE18 718 aaKnown RBP21.47■■□□□ 1.03
HIPK3-205ENST00000531504 SNX29Q8TEQ0 813 aa21.47■■□□□ 1.03
HIPK3-205ENST00000531504 C2orf15Q8WU43 125 aaKnown RBP21.47■■□□□ 1.03
HIPK3-205ENST00000531504 USP13Q92995 863 aaPredicted RBP21.47■■□□□ 1.03
HIPK3-205ENST00000531504 RAB34Q9BZG1 259 aa21.47■■□□□ 1.03
HIPK3-205ENST00000531504 SLC32A1Q9H598 525 aa21.47■■□□□ 1.03
HIPK3-205ENST00000531504 TDP1Q9NUW8 608 aa21.47■■□□□ 1.03
HIPK3-205ENST00000531504 AKAP13Q12802 2813 aa21.47■■□□□ 1.03
HIPK3-205ENST00000531504 OBSL1O75147 1896 aa21.46■■□□□ 1.03
HIPK3-205ENST00000531504 ANK1P16157 1881 aa21.46■■□□□ 1.03
HIPK3-205ENST00000531504 ARSAP15289 507 aa21.46■■□□□ 1.03
HIPK3-205ENST00000531504 SMARCB1Q12824 385 aa21.46■■□□□ 1.03
HIPK3-205ENST00000531504 MAPK7Q13164 816 aa21.46■■□□□ 1.03
HIPK3-205ENST00000531504 UAP1L1Q3KQV9 507 aa21.46■■□□□ 1.03
HIPK3-205ENST00000531504 TSTD1Q8NFU3 115 aa21.46■■□□□ 1.03
HIPK3-205ENST00000531504 SENP8Q96LD8 212 aa21.46■■□□□ 1.03
HIPK3-205ENST00000531504 NTPCRQ9BSD7 190 aaKnown RBP21.46■■□□□ 1.03
HIPK3-205ENST00000531504 FBRSL1Q9HCM7 1045 aaKnown RBP21.46■■□□□ 1.03
HIPK3-205ENST00000531504 TBX20Q9UMR3 447 aa21.46■■□□□ 1.03
HIPK3-205ENST00000531504 CCL26Q9Y258 94 aa21.46■■□□□ 1.03
HIPK3-205ENST00000531504 CDX4O14627 284 aaPredicted RBP21.45■■□□□ 1.02
HIPK3-205ENST00000531504 GJA4P35212 333 aa21.45■■□□□ 1.02
HIPK3-205ENST00000531504 LILRA4P59901 499 aa21.45■■□□□ 1.02
HIPK3-205ENST00000531504 LMAN2Q12907 356 aa21.45■■□□□ 1.02
HIPK3-205ENST00000531504 PSMD2Q13200 908 aa21.45■■□□□ 1.02
HIPK3-205ENST00000531504 RABEP1Q15276 862 aa21.45■■□□□ 1.02
HIPK3-205ENST00000531504 TMEM130Q8N3G9 435 aa21.45■■□□□ 1.02
HIPK3-205ENST00000531504 DEFB124Q8NES8 71 aa21.45■■□□□ 1.02
HIPK3-205ENST00000531504 OR10T2Q8NGX3 314 aa21.45■■□□□ 1.02
HIPK3-205ENST00000531504 SPIRE2Q8WWL2 714 aa21.45■■□□□ 1.02
HIPK3-205ENST00000531504 CD101Q93033 1021 aa21.45■■□□□ 1.02
HIPK3-205ENST00000531504 RUSC1Q9BVN2 902 aa21.45■■□□□ 1.02
HIPK3-205ENST00000531504 ZCWPW1Q9H0M4 648 aa21.45■■□□□ 1.02
HIPK3-205ENST00000531504 DSEQ9UL01 958 aa21.45■■□□□ 1.02
HIPK3-205ENST00000531504 ABCA7Q8IZY2 2146 aa21.44■■□□□ 1.02
HIPK3-205ENST00000531504 E9PMD0 336 aa21.44■■□□□ 1.02
HIPK3-205ENST00000531504 NLRP12P59046 1061 aa21.44■■□□□ 1.02
HIPK3-205ENST00000531504 ZNF268Q14587 947 aaPredicted RBP21.44■■□□□ 1.02
HIPK3-205ENST00000531504 TTC38Q5R3I4 469 aa21.44■■□□□ 1.02
HIPK3-205ENST00000531504 RINT1Q6NUQ1 792 aa21.44■■□□□ 1.02
HIPK3-205ENST00000531504 KIAA1211LQ6NV74 962 aa21.44■■□□□ 1.02
HIPK3-205ENST00000531504 TMEM161BQ8NDZ6 487 aa21.44■■□□□ 1.02
HIPK3-205ENST00000531504 SPPL2BQ8TCT7 592 aa21.44■■□□□ 1.02
HIPK3-205ENST00000531504 GIPC2Q8TF65 315 aa21.44■■□□□ 1.02
HIPK3-205ENST00000531504 MRPS31Q92665 395 aaKnown RBP21.44■■□□□ 1.02
HIPK3-205ENST00000531504 BICD1Q96G01 975 aa21.44■■□□□ 1.02
HIPK3-205ENST00000531504 WDFY3Q8IZQ1 3526 aa21.43■■□□□ 1.02
HIPK3-205ENST00000531504 PATE3B3GLJ2 98 aa21.43■■□□□ 1.02
HIPK3-205ENST00000531504 JAK2O60674 1132 aa21.43■■□□□ 1.02
HIPK3-205ENST00000531504 CYP11A1P05108 521 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms