RNA–Protein interactions for RNA: ENST00000531406.1

TM9SF1-211, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 2

Gene TM9SF1, Length 1,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-211ENST00000531406 CDC25CP30307 473 aa13.82□□□□□ -0.2
TM9SF1-211ENST00000531406 CYP4F8P98187 520 aa13.82□□□□□ -0.2
TM9SF1-211ENST00000531406 SATB1Q01826 763 aa13.82□□□□□ -0.2
TM9SF1-211ENST00000531406 KCNA1Q09470 495 aa13.82□□□□□ -0.2
TM9SF1-211ENST00000531406 SV2CQ496J9 727 aa13.82□□□□□ -0.2
TM9SF1-211ENST00000531406 TXNDC11Q6PKC3 985 aa13.82□□□□□ -0.2
TM9SF1-211ENST00000531406 SV2BQ7L1I2 683 aa13.82□□□□□ -0.2
TM9SF1-211ENST00000531406 RALGPS2Q86X27 583 aaPredicted RBP13.82□□□□□ -0.2
TM9SF1-211ENST00000531406 NT5DC4Q86YG4 428 aa13.82□□□□□ -0.2
TM9SF1-211ENST00000531406 CELF5Q8N6W0 485 aaKnown RBP13.82□□□□□ -0.2
TM9SF1-211ENST00000531406 SPPL2BQ8TCT7 592 aa13.82□□□□□ -0.2
TM9SF1-211ENST00000531406 ACCSQ96QU6 501 aa13.82□□□□□ -0.2
TM9SF1-211ENST00000531406 FAM213AQ9BRX8 229 aa13.82□□□□□ -0.2
TM9SF1-211ENST00000531406 SLC46A2Q9BY10 475 aa13.82□□□□□ -0.2
TM9SF1-211ENST00000531406 MRPL44Q9H9J2 332 aaKnown RBP13.82□□□□□ -0.2
TM9SF1-211ENST00000531406 RBM12Q9NTZ6 932 aaKnown RBP13.82□□□□□ -0.2
TM9SF1-211ENST00000531406 GTSE1Q9NYZ3 720 aa13.82□□□□□ -0.2
TM9SF1-211ENST00000531406 EXOC7Q9UPT5 735 aa13.82□□□□□ -0.2
TM9SF1-211ENST00000531406 COL4A2P08572 1712 aa13.81□□□□□ -0.2
TM9SF1-211ENST00000531406 PATJQ8NI35 1801 aa13.81□□□□□ -0.2
TM9SF1-211ENST00000531406 TGM1P22735 817 aa13.81□□□□□ -0.2
TM9SF1-211ENST00000531406 CTHP32929 405 aa13.81□□□□□ -0.2
TM9SF1-211ENST00000531406 PNPLA4P41247 253 aa13.81□□□□□ -0.2
TM9SF1-211ENST00000531406 WNT7BP56706 349 aa13.81□□□□□ -0.2
TM9SF1-211ENST00000531406 TNK2Q07912 1038 aa13.81□□□□□ -0.2
TM9SF1-211ENST00000531406 RESTQ13127 1097 aa13.81□□□□□ -0.2
TM9SF1-211ENST00000531406 TAF12Q16514 161 aa13.81□□□□□ -0.2
TM9SF1-211ENST00000531406 WDR44Q5JSH3 913 aa13.81□□□□□ -0.2
TM9SF1-211ENST00000531406 L1TD1Q5T7N2 865 aaKnown RBP13.81□□□□□ -0.2
TM9SF1-211ENST00000531406 Q6ZS52 159 aa13.81□□□□□ -0.2
TM9SF1-211ENST00000531406 DCP1BQ8IZD4 617 aaKnown RBP13.81□□□□□ -0.2
TM9SF1-211ENST00000531406 ZSWIM2Q8NEG5 633 aa13.81□□□□□ -0.2
TM9SF1-211ENST00000531406 BPIFB1Q8TDL5 484 aa13.81□□□□□ -0.2
TM9SF1-211ENST00000531406 ZNF560Q96MR9 790 aa13.81□□□□□ -0.2
TM9SF1-211ENST00000531406 CLIC6Q96NY7 704 aa13.81□□□□□ -0.2
TM9SF1-211ENST00000531406 GCNAQ96QF7 691 aa13.81□□□□□ -0.2
TM9SF1-211ENST00000531406 SMG9Q9H0W8 520 aaKnown RBP13.81□□□□□ -0.2
TM9SF1-211ENST00000531406 THG1LQ9NWX6 298 aaKnown RBP13.81□□□□□ -0.2
TM9SF1-211ENST00000531406 ABI2Q9NYB9 513 aaPredicted RBP13.81□□□□□ -0.2
TM9SF1-211ENST00000531406 TBC1D7Q9P0N9 293 aa13.81□□□□□ -0.2
TM9SF1-211ENST00000531406 RAB23Q9ULC3 237 aa13.81□□□□□ -0.2
TM9SF1-211ENST00000531406 MIA3Q5JRA6 1907 aa13.81□□□□□ -0.2
TM9SF1-211ENST00000531406 PDCD11Q14690 1871 aaKnown RBP13.8□□□□□ -0.2
TM9SF1-211ENST00000531406 CHURC1-FNTBB4DL54 471 aa13.8□□□□□ -0.2
TM9SF1-211ENST00000531406 HMGA1P17096 107 aaKnown RBP13.8□□□□□ -0.2
TM9SF1-211ENST00000531406 SDHBP21912 280 aa13.8□□□□□ -0.2
TM9SF1-211ENST00000531406 TXLNAP40222 546 aa13.8□□□□□ -0.2
TM9SF1-211ENST00000531406 FNTBP49356 437 aa13.8□□□□□ -0.2
TM9SF1-211ENST00000531406 CASP5P51878 434 aa13.8□□□□□ -0.2
TM9SF1-211ENST00000531406 TFAMQ00059 246 aaKnown RBP13.8□□□□□ -0.2
TM9SF1-211ENST00000531406 PLCB2Q00722 1185 aa13.8□□□□□ -0.2
TM9SF1-211ENST00000531406 LMNB2Q03252 620 aa13.8□□□□□ -0.2
TM9SF1-211ENST00000531406 CEBPZQ03701 1054 aaKnown RBP13.8□□□□□ -0.2
TM9SF1-211ENST00000531406 DMWDQ09019 674 aa13.8□□□□□ -0.2
TM9SF1-211ENST00000531406 LPAL2Q16609 132 aa13.8□□□□□ -0.2
TM9SF1-211ENST00000531406 DGKKQ5KSL6 1271 aa13.8□□□□□ -0.2
TM9SF1-211ENST00000531406 FAM173BQ6P4H8 233 aa13.8□□□□□ -0.2
TM9SF1-211ENST00000531406 TMEM150AQ86TG1 271 aa13.8□□□□□ -0.2
TM9SF1-211ENST00000531406 BRSK2Q8IWQ3 736 aa13.8□□□□□ -0.2
TM9SF1-211ENST00000531406 CMTM8Q8IZV2 173 aa13.8□□□□□ -0.2
TM9SF1-211ENST00000531406 PDCL2Q8N4E4 241 aa13.8□□□□□ -0.2
TM9SF1-211ENST00000531406 SAAL1Q96ER3 474 aa13.8□□□□□ -0.2
TM9SF1-211ENST00000531406 PARD6AQ9NPB6 346 aa13.8□□□□□ -0.2
TM9SF1-211ENST00000531406 OLFML3Q9NRN5 406 aa13.8□□□□□ -0.2
TM9SF1-211ENST00000531406 TMLHEQ9NVH6 421 aa13.8□□□□□ -0.2
TM9SF1-211ENST00000531406 GMEB2Q9UKD1 530 aa13.8□□□□□ -0.2
TM9SF1-211ENST00000531406 L1RE1Q9UN81 338 aa13.8□□□□□ -0.2
TM9SF1-211ENST00000531406 AGAP1Q9UPQ3 857 aa13.8□□□□□ -0.2
TM9SF1-211ENST00000531406 PCDHB5Q9Y5E4 795 aa13.8□□□□□ -0.2
TM9SF1-211ENST00000531406 PCDHB13Q9Y5F0 798 aa13.8□□□□□ -0.2
TM9SF1-211ENST00000531406 PRR5-ARHGAP8B1AHC4 643 aa13.79□□□□□ -0.2
TM9SF1-211ENST00000531406 K7ESF4 209 aa13.79□□□□□ -0.2
TM9SF1-211ENST00000531406 TULP1O00294 542 aaPredicted RBP13.79□□□□□ -0.2
TM9SF1-211ENST00000531406 HRO43593 1189 aa13.79□□□□□ -0.2
TM9SF1-211ENST00000531406 HUS1O60921 280 aa13.79□□□□□ -0.2
TM9SF1-211ENST00000531406 PAPSS2O95340 614 aaPredicted RBP13.79□□□□□ -0.2
TM9SF1-211ENST00000531406 GCNT3O95395 438 aa13.79□□□□□ -0.2
TM9SF1-211ENST00000531406 F11P03951 625 aa13.79□□□□□ -0.2
TM9SF1-211ENST00000531406 SYT1P21579 422 aa13.79□□□□□ -0.2
TM9SF1-211ENST00000531406 GARTP22102 1010 aa13.79□□□□□ -0.2
TM9SF1-211ENST00000531406 POLR2BP30876 1174 aaKnown RBP13.79□□□□□ -0.2
TM9SF1-211ENST00000531406 NLRP12P59046 1061 aa13.79□□□□□ -0.2
TM9SF1-211ENST00000531406 ARHGAP8P85298 464 aa13.79□□□□□ -0.2
TM9SF1-211ENST00000531406 TSPY1Q01534 308 aa13.79□□□□□ -0.2
TM9SF1-211ENST00000531406 PON2Q15165 354 aa13.79□□□□□ -0.2
TM9SF1-211ENST00000531406 NFE2Q16621 373 aaPredicted RBP13.79□□□□□ -0.2
TM9SF1-211ENST00000531406 ITPRIPL2Q3MIP1 535 aa13.79□□□□□ -0.2
TM9SF1-211ENST00000531406 LAIR1Q6GTX8 287 aa13.79□□□□□ -0.2
TM9SF1-211ENST00000531406 SYCP3Q8IZU3 236 aa13.79□□□□□ -0.2
TM9SF1-211ENST00000531406 C1orf127Q8N9H9 656 aa13.79□□□□□ -0.2
TM9SF1-211ENST00000531406 CACTINQ8WUQ7 758 aaKnown RBP13.79□□□□□ -0.2
TM9SF1-211ENST00000531406 INTS4Q96HW7 963 aaKnown RBP13.79□□□□□ -0.2
TM9SF1-211ENST00000531406 PI4K2AQ9BTU6 479 aa13.79□□□□□ -0.2
TM9SF1-211ENST00000531406 FGFBP2Q9BYJ0 223 aa13.79□□□□□ -0.2
TM9SF1-211ENST00000531406 PANK2Q9BZ23 570 aa13.79□□□□□ -0.2
TM9SF1-211ENST00000531406 GKN1Q9NS71 199 aa13.79□□□□□ -0.2
TM9SF1-211ENST00000531406 RBAKQ9NYW8 714 aaPredicted RBP13.79□□□□□ -0.2
TM9SF1-211ENST00000531406 ZMYM5Q9UJ78 669 aa13.79□□□□□ -0.2
TM9SF1-211ENST00000531406 USP18Q9UMW8 372 aa13.79□□□□□ -0.2
TM9SF1-211ENST00000531406 FANCMQ8IYD8 2048 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms