RNA–Protein interactions for RNA: ENST00000531290.5

TRAPPC4-210, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,135 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-210ENST00000531290 SHISA7A6NL88 538 aa23.98■■□□□ 1.43
TRAPPC4-210ENST00000531290 CHADO15335 359 aa23.98■■□□□ 1.43
TRAPPC4-210ENST00000531290 CUTAO60888 179 aa23.98■■□□□ 1.43
TRAPPC4-210ENST00000531290 YEATS4O95619 227 aa23.98■■□□□ 1.43
TRAPPC4-210ENST00000531290 KRT19P08727 400 aa23.98■■□□□ 1.43
TRAPPC4-210ENST00000531290 HAPLN1P10915 354 aaPredicted RBP23.98■■□□□ 1.43
TRAPPC4-210ENST00000531290 PDIA4P13667 645 aaKnown RBP23.98■■□□□ 1.43
TRAPPC4-210ENST00000531290 ATF6P18850 670 aa23.98■■□□□ 1.43
TRAPPC4-210ENST00000531290 RBP5P82980 135 aa23.98■■□□□ 1.43
TRAPPC4-210ENST00000531290 BFSP1Q12934 665 aa23.98■■□□□ 1.43
TRAPPC4-210ENST00000531290 FZD5Q13467 585 aa23.98■■□□□ 1.43
TRAPPC4-210ENST00000531290 NFE2Q16621 373 aaPredicted RBP23.98■■□□□ 1.43
TRAPPC4-210ENST00000531290 FOXD4L5Q5VV16 416 aaPredicted RBP23.98■■□□□ 1.43
TRAPPC4-210ENST00000531290 PDCL2Q8N4E4 241 aa23.98■■□□□ 1.43
TRAPPC4-210ENST00000531290 ATRIPQ8WXE1 791 aa23.98■■□□□ 1.43
TRAPPC4-210ENST00000531290 FOXD4L4Q8WXT5 416 aaPredicted RBP23.98■■□□□ 1.43
TRAPPC4-210ENST00000531290 DHX58Q96C10 678 aa23.98■■□□□ 1.43
TRAPPC4-210ENST00000531290 RSPRY1Q96DX4 576 aa23.98■■□□□ 1.43
TRAPPC4-210ENST00000531290 TASP1Q9H6P5 420 aa23.98■■□□□ 1.43
TRAPPC4-210ENST00000531290 PDE11AQ9HCR9 933 aa23.98■■□□□ 1.43
TRAPPC4-210ENST00000531290 KBTBD4Q9NVX7 518 aa23.98■■□□□ 1.43
TRAPPC4-210ENST00000531290 TMEM191BP0C7N4 346 aa23.97■■□□□ 1.43
TRAPPC4-210ENST00000531290 KPNA1P52294 538 aaPredicted RBP23.97■■□□□ 1.43
TRAPPC4-210ENST00000531290 MLLT6P55198 1093 aaPredicted RBP23.97■■□□□ 1.43
TRAPPC4-210ENST00000531290 FCHO2Q0JRZ9 810 aa23.97■■□□□ 1.43
TRAPPC4-210ENST00000531290 TMEM86AQ8N2M4 240 aa23.97■■□□□ 1.43
TRAPPC4-210ENST00000531290 HPS3Q969F9 1004 aa23.97■■□□□ 1.43
TRAPPC4-210ENST00000531290 HINFPQ9BQA5 517 aa23.97■■□□□ 1.43
TRAPPC4-210ENST00000531290 MKNK1Q9BUB5 465 aa23.97■■□□□ 1.43
TRAPPC4-210ENST00000531290 TRIM9Q9C026 710 aa23.97■■□□□ 1.43
TRAPPC4-210ENST00000531290 LMAN1LQ9HAT1 526 aa23.97■■□□□ 1.43
TRAPPC4-210ENST00000531290 NCANO14594 1321 aa23.96■■□□□ 1.43
TRAPPC4-210ENST00000531290 ZNF233A6NK53 670 aa23.96■■□□□ 1.43
TRAPPC4-210ENST00000531290 CCNE1P24864 410 aa23.96■■□□□ 1.43
TRAPPC4-210ENST00000531290 ASIC1P78348 528 aa23.96■■□□□ 1.43
TRAPPC4-210ENST00000531290 MYL7Q01449 175 aa23.96■■□□□ 1.43
TRAPPC4-210ENST00000531290 MTAPQ13126 283 aa23.96■■□□□ 1.43
TRAPPC4-210ENST00000531290 SURF1Q15526 300 aa23.96■■□□□ 1.43
TRAPPC4-210ENST00000531290 E2F4Q16254 413 aa23.96■■□□□ 1.43
TRAPPC4-210ENST00000531290 C1orf228Q6PIY5 440 aa23.96■■□□□ 1.43
TRAPPC4-210ENST00000531290 MSANTD3Q96H12 275 aa23.96■■□□□ 1.43
TRAPPC4-210ENST00000531290 ANKRD36BP1Q96IX9 119 aa23.96■■□□□ 1.43
TRAPPC4-210ENST00000531290 ACBD6Q9BR61 282 aa23.96■■□□□ 1.43
TRAPPC4-210ENST00000531290 C8orf33Q9H7E9 229 aaPredicted RBP23.96■■□□□ 1.43
TRAPPC4-210ENST00000531290 DDX43Q9NXZ2 648 aaKnown RBP23.96■■□□□ 1.43
TRAPPC4-210ENST00000531290 OBP2AQ9NY56 170 aa23.96■■□□□ 1.43
TRAPPC4-210ENST00000531290 L1RE1Q9UN81 338 aa23.96■■□□□ 1.43
TRAPPC4-210ENST00000531290 PCDHGA2Q9Y5H1 932 aa23.96■■□□□ 1.43
TRAPPC4-210ENST00000531290 SNX9Q9Y5X1 595 aa23.96■■□□□ 1.43
TRAPPC4-210ENST00000531290 RIF1Q5UIP0 2472 aaKnown RBP23.96■■□□□ 1.43
TRAPPC4-210ENST00000531290 MYH15Q9Y2K3 1946 aa23.96■■□□□ 1.43
TRAPPC4-210ENST00000531290 ARNTLO00327 626 aa23.95■■□□□ 1.42
TRAPPC4-210ENST00000531290 PRPF40AO75400 957 aaKnown RBP23.95■■□□□ 1.42
TRAPPC4-210ENST00000531290 CYP4F8P98187 520 aa23.95■■□□□ 1.42
TRAPPC4-210ENST00000531290 FOXD4L6Q3SYB3 417 aaPredicted RBP23.95■■□□□ 1.42
TRAPPC4-210ENST00000531290 ARHGAP29Q52LW3 1261 aa23.95■■□□□ 1.42
TRAPPC4-210ENST00000531290 FOXD4L3Q6VB84 417 aaPredicted RBP23.95■■□□□ 1.42
TRAPPC4-210ENST00000531290 ZNF687Q8N1G0 1237 aa23.95■■□□□ 1.42
TRAPPC4-210ENST00000531290 GLIS3Q8NEA6 775 aa23.95■■□□□ 1.42
TRAPPC4-210ENST00000531290 PI4K2AQ9BTU6 479 aa23.95■■□□□ 1.42
TRAPPC4-210ENST00000531290 MTMR12Q9C0I1 747 aa23.95■■□□□ 1.42
TRAPPC4-210ENST00000531290 CHRDQ9H2X0 955 aa23.95■■□□□ 1.42
TRAPPC4-210ENST00000531290 IL21Q9HBE4 155 aa23.95■■□□□ 1.42
TRAPPC4-210ENST00000531290 KIAA1586Q9HCI6 787 aa23.95■■□□□ 1.42
TRAPPC4-210ENST00000531290 TMLHEQ9NVH6 421 aa23.95■■□□□ 1.42
TRAPPC4-210ENST00000531290 ZSCAN32Q9NX65 697 aa23.95■■□□□ 1.42
TRAPPC4-210ENST00000531290 GDAP2Q9NXN4 497 aa23.95■■□□□ 1.42
TRAPPC4-210ENST00000531290 ZMYM5Q9UJ78 669 aa23.95■■□□□ 1.42
TRAPPC4-210ENST00000531290 PDCD11Q14690 1871 aaKnown RBP23.95■■□□□ 1.42
TRAPPC4-210ENST00000531290 COL4A3Q01955 1670 aa23.95■■□□□ 1.42
TRAPPC4-210ENST00000531290 TNNC2P02585 160 aa23.94■■□□□ 1.42
TRAPPC4-210ENST00000531290 WEE1P30291 646 aa23.94■■□□□ 1.42
TRAPPC4-210ENST00000531290 MYO1EQ12965 1108 aa23.94■■□□□ 1.42
TRAPPC4-210ENST00000531290 PPP2R5DQ14738 602 aa23.94■■□□□ 1.42
TRAPPC4-210ENST00000531290 DUOXA2Q1HG44 320 aa23.94■■□□□ 1.42
TRAPPC4-210ENST00000531290 SHC4Q6S5L8 630 aa23.94■■□□□ 1.42
TRAPPC4-210ENST00000531290 TSSK4Q6SA08 328 aa23.94■■□□□ 1.42
TRAPPC4-210ENST00000531290 RUBCNQ92622 972 aa23.94■■□□□ 1.42
TRAPPC4-210ENST00000531290 FAM84AQ96KN4 292 aa23.94■■□□□ 1.42
TRAPPC4-210ENST00000531290 LRRC3BQ96PB8 259 aa23.94■■□□□ 1.42
TRAPPC4-210ENST00000531290 IER2Q9BTL4 223 aa23.94■■□□□ 1.42
TRAPPC4-210ENST00000531290 INTS13Q9NVM9 706 aa23.94■■□□□ 1.42
TRAPPC4-210ENST00000531290 THG1LQ9NWX6 298 aaKnown RBP23.94■■□□□ 1.42
TRAPPC4-210ENST00000531290 SLC38A8A6NNN8 435 aa23.93■■□□□ 1.42
TRAPPC4-210ENST00000531290 EIF3DO15371 548 aaKnown RBP eCLIP23.93■■□□□ 1.42
TRAPPC4-210ENST00000531290 ZSCAN22P10073 491 aaPredicted RBP23.93■■□□□ 1.42
TRAPPC4-210ENST00000531290 ACAT1P24752 427 aaKnown RBP23.93■■□□□ 1.42
TRAPPC4-210ENST00000531290 LHX1P48742 406 aa23.93■■□□□ 1.42
TRAPPC4-210ENST00000531290 RPL10AP62906 217 aaKnown RBP23.93■■□□□ 1.42
TRAPPC4-210ENST00000531290 LMBRD2Q68DH5 695 aaPredicted RBP23.93■■□□□ 1.42
TRAPPC4-210ENST00000531290 CBWD2Q8IUF1 395 aa23.93■■□□□ 1.42
TRAPPC4-210ENST00000531290 TOP6BLQ8N6T0 577 aa23.93■■□□□ 1.42
TRAPPC4-210ENST00000531290 CXorf38Q8TB03 319 aa23.93■■□□□ 1.42
TRAPPC4-210ENST00000531290 SPATA18Q8TC71 538 aa23.93■■□□□ 1.42
TRAPPC4-210ENST00000531290 BPIFB1Q8TDL5 484 aa23.93■■□□□ 1.42
TRAPPC4-210ENST00000531290 C7orf25Q9BPX7 421 aa23.93■■□□□ 1.42
TRAPPC4-210ENST00000531290 SLC46A2Q9BY10 475 aa23.93■■□□□ 1.42
TRAPPC4-210ENST00000531290 HSPBP1Q9NZL4 362 aa23.93■■□□□ 1.42
TRAPPC4-210ENST00000531290 SIX4Q9UIU6 781 aa23.93■■□□□ 1.42
TRAPPC4-210ENST00000531290 POLR2DO15514 142 aaKnown RBP23.92■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 98.3 ms