RNA–Protein interactions for RNA: ENST00000530784.1

CSDE1-213, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-213ENST00000530784 KRT4P19013 534 aa8.9□□□□□ -0.98
CSDE1-213ENST00000530784 CTXN1P60606 82 aa8.9□□□□□ -0.98
CSDE1-213ENST00000530784 CDC42EP1Q00587 391 aa8.9□□□□□ -0.98
CSDE1-213ENST00000530784 DPTQ07507 201 aa8.9□□□□□ -0.98
CSDE1-213ENST00000530784 LDLRAD3Q86YD5 345 aa8.9□□□□□ -0.98
CSDE1-213ENST00000530784 VRK3Q8IV63 474 aa8.9□□□□□ -0.98
CSDE1-213ENST00000530784 DCBLD1Q8N8Z6 715 aa8.9□□□□□ -0.98
CSDE1-213ENST00000530784 DKK2Q9UBU2 259 aa8.9□□□□□ -0.98
CSDE1-213ENST00000530784 FPGT-TNNI3KV9GXZ4 949 aa8.9□□□□□ -0.98
CSDE1-213ENST00000530784 PAPPAQ13219 1627 aa8.9□□□□□ -0.99
CSDE1-213ENST00000530784 FAM208AQ9UK61 1670 aaKnown RBP8.89□□□□□ -0.99
CSDE1-213ENST00000530784 PTPAQ15257 358 aa8.89□□□□□ -0.99
CSDE1-213ENST00000530784 UAP1L1Q3KQV9 507 aa8.89□□□□□ -0.99
CSDE1-213ENST00000530784 CPEB3Q8NE35 698 aaKnown RBP8.89□□□□□ -0.99
CSDE1-213ENST00000530784 IFI44Q8TCB0 444 aa8.89□□□□□ -0.99
CSDE1-213ENST00000530784 KAT5Q92993 513 aa8.89□□□□□ -0.99
CSDE1-213ENST00000530784 GSTO2Q9H4Y5 243 aa8.89□□□□□ -0.99
CSDE1-213ENST00000530784 ANKFY1Q9P2R3 1169 aa8.89□□□□□ -0.99
CSDE1-213ENST00000530784 PCDHB1Q9Y5F3 818 aa8.89□□□□□ -0.99
CSDE1-213ENST00000530784 KIAA0391O15091 583 aaKnown RBP8.88□□□□□ -0.99
CSDE1-213ENST00000530784 ZRANB2O95218 330 aaKnown RBP eCLIP8.88□□□□□ -0.99
CSDE1-213ENST00000530784 ELANEP08246 267 aa8.88□□□□□ -0.99
CSDE1-213ENST00000530784 ADKP55263 362 aaKnown RBP8.88□□□□□ -0.99
CSDE1-213ENST00000530784 CREMQ03060 361 aa8.88□□□□□ -0.99
CSDE1-213ENST00000530784 IP6K1Q92551 441 aa8.88□□□□□ -0.99
CSDE1-213ENST00000530784 CHFRQ96EP1 664 aa8.88□□□□□ -0.99
CSDE1-213ENST00000530784 LTV1Q96GA3 475 aaPredicted RBP8.88□□□□□ -0.99
CSDE1-213ENST00000530784 COG3Q96JB2 828 aa8.88□□□□□ -0.99
CSDE1-213ENST00000530784 ZSWIM1Q9BR11 485 aa8.88□□□□□ -0.99
CSDE1-213ENST00000530784 C11orf54Q9H0W9 315 aaPredicted RBP8.88□□□□□ -0.99
CSDE1-213ENST00000530784 BTAF1O14981 1849 aa8.87□□□□□ -0.99
CSDE1-213ENST00000530784 MAP3K19Q56UN5 1328 aa8.87□□□□□ -0.99
CSDE1-213ENST00000530784 MARCH11A6NNE9 402 aa8.87□□□□□ -0.99
CSDE1-213ENST00000530784 SGTAO43765 313 aa8.87□□□□□ -0.99
CSDE1-213ENST00000530784 CFIP05156 583 aa8.87□□□□□ -0.99
CSDE1-213ENST00000530784 GCSHP23434 173 aa8.87□□□□□ -0.99
CSDE1-213ENST00000530784 BMPR1AP36894 532 aa8.87□□□□□ -0.99
CSDE1-213ENST00000530784 RESTQ13127 1097 aa8.87□□□□□ -0.99
CSDE1-213ENST00000530784 DACT2Q5SW24 774 aa8.87□□□□□ -0.99
CSDE1-213ENST00000530784 MAPKAPK5Q8IW41 473 aa8.87□□□□□ -0.99
CSDE1-213ENST00000530784 TESK2Q96S53 571 aa8.87□□□□□ -0.99
CSDE1-213ENST00000530784 PRRX2Q99811 253 aa8.87□□□□□ -0.99
CSDE1-213ENST00000530784 ADAM2Q99965 735 aa8.87□□□□□ -0.99
CSDE1-213ENST00000530784 SYT17Q9BSW7 474 aa8.87□□□□□ -0.99
CSDE1-213ENST00000530784 REXO4Q9GZR2 422 aaKnown RBP8.87□□□□□ -0.99
CSDE1-213ENST00000530784 IKZF4Q9H2S9 585 aa8.87□□□□□ -0.99
CSDE1-213ENST00000530784 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.87□□□□□ -0.99
CSDE1-213ENST00000530784 RTL1A6NKG5 1358 aa8.86□□□□□ -0.99
CSDE1-213ENST00000530784 ANKRD36BQ8N2N9 1353 aa8.86□□□□□ -0.99
CSDE1-213ENST00000530784 hCG_2014768A0A024R1R8 64 aa8.86□□□□□ -0.99
CSDE1-213ENST00000530784 A0A1B0GTW7 788 aa8.86□□□□□ -0.99
CSDE1-213ENST00000530784 CCDC78A2IDD5 438 aa8.86□□□□□ -0.99
CSDE1-213ENST00000530784 UNC119BA6NIH7 251 aa8.86□□□□□ -0.99
CSDE1-213ENST00000530784 HLA-DOAP06340 250 aa8.86□□□□□ -0.99
CSDE1-213ENST00000530784 ALAS1P13196 640 aa8.86□□□□□ -0.99
CSDE1-213ENST00000530784 NCLP19338 710 aaKnown RBP8.86□□□□□ -0.99
CSDE1-213ENST00000530784 DDX6P26196 483 aaKnown RBP eCLIP8.86□□□□□ -0.99
CSDE1-213ENST00000530784 HOXC9P31274 260 aa8.86□□□□□ -0.99
CSDE1-213ENST00000530784 RECQLP46063 649 aaPredicted RBP8.86□□□□□ -0.99
CSDE1-213ENST00000530784 AMPHP49418 695 aa8.86□□□□□ -0.99
CSDE1-213ENST00000530784 INHBCP55103 352 aa8.86□□□□□ -0.99
CSDE1-213ENST00000530784 ZNF280AP59817 542 aaPredicted RBP8.86□□□□□ -0.99
CSDE1-213ENST00000530784 LAIR1Q6GTX8 287 aa8.86□□□□□ -0.99
CSDE1-213ENST00000530784 MRGPRGQ86SM5 289 aa8.86□□□□□ -0.99
CSDE1-213ENST00000530784 ARHGEF19Q8IW93 802 aa8.86□□□□□ -0.99
CSDE1-213ENST00000530784 CLPTM1LQ96KA5 538 aa8.86□□□□□ -0.99
CSDE1-213ENST00000530784 MRGPRX4Q96LA9 322 aa8.86□□□□□ -0.99
CSDE1-213ENST00000530784 DMRTA2Q96SC8 542 aa8.86□□□□□ -0.99
CSDE1-213ENST00000530784 TTPALQ9BTX7 342 aa8.86□□□□□ -0.99
CSDE1-213ENST00000530784 FOXN1O15353 648 aa8.85□□□□□ -0.99
CSDE1-213ENST00000530784 SNUPNO95149 360 aaKnown RBP8.85□□□□□ -0.99
CSDE1-213ENST00000530784 SBK3P0C264 359 aa8.85□□□□□ -0.99
CSDE1-213ENST00000530784 SLC6A4P31645 630 aa8.85□□□□□ -0.99
CSDE1-213ENST00000530784 ANAPC15P60006 121 aa8.85□□□□□ -0.99
CSDE1-213ENST00000530784 EXOSC10Q01780 885 aaKnown RBP8.85□□□□□ -0.99
CSDE1-213ENST00000530784 OCA2Q04671 838 aa8.85□□□□□ -0.99
CSDE1-213ENST00000530784 WDR11Q9BZH6 1224 aa8.85□□□□□ -0.99
CSDE1-213ENST00000530784 SERHL2Q9H4I8 314 aa8.85□□□□□ -0.99
CSDE1-213ENST00000530784 SMG6Q86US8 1419 aaKnown RBP8.85□□□□□ -0.99
CSDE1-213ENST00000530784 MAP3K5Q99683 1374 aa8.85□□□□□ -0.99
CSDE1-213ENST00000530784 MEGF6O75095 1541 aa8.85□□□□□ -0.99
CSDE1-213ENST00000530784 CDHR4A6H8M9 788 aa8.84□□□□□ -0.99
CSDE1-213ENST00000530784 TMEM191CA6NGB0 347 aa8.84□□□□□ -0.99
CSDE1-213ENST00000530784 GRM6O15303 877 aa8.84□□□□□ -0.99
CSDE1-213ENST00000530784 CKBP12277 381 aa8.84□□□□□ -0.99
CSDE1-213ENST00000530784 FGFR4P22455 802 aa8.84□□□□□ -0.99
CSDE1-213ENST00000530784 NOMO3P69849 1222 aa8.84□□□□□ -0.99
CSDE1-213ENST00000530784 TMF1P82094 1093 aa8.84□□□□□ -0.99
CSDE1-213ENST00000530784 GUCY1B3Q02153 619 aa8.84□□□□□ -0.99
CSDE1-213ENST00000530784 ATP2B3Q16720 1220 aa8.84□□□□□ -0.99
CSDE1-213ENST00000530784 NOMO2Q5JPE7 1267 aa8.84□□□□□ -0.99
CSDE1-213ENST00000530784 B3GNTL1Q67FW5 361 aaPredicted RBP8.84□□□□□ -0.99
CSDE1-213ENST00000530784 PPP4R3AQ6IN85 833 aa8.84□□□□□ -0.99
CSDE1-213ENST00000530784 MIER2Q8N344 545 aa8.84□□□□□ -0.99
CSDE1-213ENST00000530784 TMEM132CQ8N3T6 1108 aa8.84□□□□□ -0.99
CSDE1-213ENST00000530784 FITM2Q8N6M3 262 aa8.84□□□□□ -0.99
CSDE1-213ENST00000530784 DOT1LQ8TEK3 1739 aa8.84□□□□□ -0.99
CSDE1-213ENST00000530784 CEP89Q96ST8 783 aa8.84□□□□□ -0.99
CSDE1-213ENST00000530784 RNPEPQ9H4A4 650 aa8.84□□□□□ -0.99
CSDE1-213ENST00000530784 USP25Q9UHP3 1055 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms