RNA–Protein interactions for RNA: ENST00000530748.5

CTNND1-227, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-227ENST00000530748 KLC4Q9NSK0 619 aa8.85□□□□□ -0.99
CTNND1-227ENST00000530748 PKD2L2Q9NZM6 624 aa8.85□□□□□ -0.99
CTNND1-227ENST00000530748 GTPBP10A4D1E9 387 aaKnown RBP8.85□□□□□ -0.99
CTNND1-227ENST00000530748 KDM1AO60341 852 aa8.85□□□□□ -0.99
CTNND1-227ENST00000530748 GRAP2O75791 330 aa8.85□□□□□ -0.99
CTNND1-227ENST00000530748 KDSRQ06136 332 aa8.85□□□□□ -0.99
CTNND1-227ENST00000530748 MAPRE1Q15691 268 aaKnown RBP8.85□□□□□ -0.99
CTNND1-227ENST00000530748 DCAF6Q58WW2 860 aa8.85□□□□□ -0.99
CTNND1-227ENST00000530748 TMA16Q96EY4 203 aaKnown RBP8.85□□□□□ -0.99
CTNND1-227ENST00000530748 SRPK1Q96SB4 655 aaKnown RBP8.85□□□□□ -0.99
CTNND1-227ENST00000530748 YIPF2Q9BWQ6 316 aa8.85□□□□□ -0.99
CTNND1-227ENST00000530748 OSBPL8Q9BZF1 889 aa8.85□□□□□ -0.99
CTNND1-227ENST00000530748 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.85□□□□□ -0.993e-7■■□□□ 14.4
CTNND1-227ENST00000530748 HPS5Q9UPZ3 1129 aa8.85□□□□□ -0.99
CTNND1-227ENST00000530748 USP15Q9Y4E8 981 aaPredicted RBP8.85□□□□□ -0.99
CTNND1-227ENST00000530748 RIMS1Q86UR5 1692 aaKnown RBP8.85□□□□□ -0.99
CTNND1-227ENST00000530748 ZSCAN9O15535 394 aaPredicted RBP8.85□□□□□ -0.99
CTNND1-227ENST00000530748 CDH16O75309 829 aa8.85□□□□□ -0.99
CTNND1-227ENST00000530748 UPP2O95045 317 aa8.85□□□□□ -0.99
CTNND1-227ENST00000530748 SNRPAP09012 282 aaKnown RBP8.85□□□□□ -0.99
CTNND1-227ENST00000530748 CYP2C8P10632 490 aa8.85□□□□□ -0.99
CTNND1-227ENST00000530748 NCAM1P13591 858 aa8.85□□□□□ -0.99
CTNND1-227ENST00000530748 RGS2P41220 211 aa8.85□□□□□ -0.99
CTNND1-227ENST00000530748 RGS4P49798 205 aa8.85□□□□□ -0.99
CTNND1-227ENST00000530748 FXR1P51114 621 aaKnown RBP eCLIP8.85□□□□□ -0.99
CTNND1-227ENST00000530748 PTRHD1Q6GMV3 140 aaKnown RBP8.85□□□□□ -0.99
CTNND1-227ENST00000530748 NAPEPLDQ6IQ20 393 aa8.85□□□□□ -0.99
CTNND1-227ENST00000530748 SDE2Q6IQ49 451 aa8.85□□□□□ -0.99
CTNND1-227ENST00000530748 POTEAQ6S8J7 498 aa8.85□□□□□ -0.99
CTNND1-227ENST00000530748 ANKRD13AQ8IZ07 590 aa8.85□□□□□ -0.99
CTNND1-227ENST00000530748 MMGT1Q8N4V1 131 aa8.85□□□□□ -0.99
CTNND1-227ENST00000530748 SPATA18Q8TC71 538 aa8.85□□□□□ -0.99
CTNND1-227ENST00000530748 CERKQ8TCT0 537 aa8.85□□□□□ -0.99
CTNND1-227ENST00000530748 SH2D3AQ9BRG2 576 aa8.85□□□□□ -0.99
CTNND1-227ENST00000530748 UBQLN1Q9UMX0 589 aaKnown RBP8.85□□□□□ -0.99
CTNND1-227ENST00000530748 SETD1BQ9UPS6 1966 aaKnown RBP8.85□□□□□ -0.99
CTNND1-227ENST00000530748 EIF3HO15372 352 aaKnown RBP eCLIP8.84□□□□□ -0.992e-7■■□□□ 12
CTNND1-227ENST00000530748 SLC37A4O43826 429 aa8.84□□□□□ -0.99
CTNND1-227ENST00000530748 GYPCP04921 128 aa8.84□□□□□ -0.99
CTNND1-227ENST00000530748 FDPSP14324 419 aaKnown RBP8.84□□□□□ -0.99
CTNND1-227ENST00000530748 CDH2P19022 906 aaPredicted RBP8.84□□□□□ -0.99
CTNND1-227ENST00000530748 MMP14P50281 582 aa8.84□□□□□ -0.99
CTNND1-227ENST00000530748 C10orf120Q5SQS8 335 aa8.84□□□□□ -0.99
CTNND1-227ENST00000530748 MOXD1Q6UVY6 613 aa8.84□□□□□ -0.99
CTNND1-227ENST00000530748 IPMKQ8NFU5 416 aa8.84□□□□□ -0.99
CTNND1-227ENST00000530748 DACH2Q96NX9 599 aa8.84□□□□□ -0.99
CTNND1-227ENST00000530748 PI4K2AQ9BTU6 479 aa8.84□□□□□ -0.99
CTNND1-227ENST00000530748 GPR182O15218 404 aa8.84□□□□□ -0.99
CTNND1-227ENST00000530748 CLASP2O75122 1294 aaKnown RBP8.84□□□□□ -0.99
CTNND1-227ENST00000530748 HLA-DPA1P20036 260 aa8.84□□□□□ -0.99
CTNND1-227ENST00000530748 ETFBP38117 255 aa8.84□□□□□ -0.99
CTNND1-227ENST00000530748 ARL4DP49703 201 aa8.84□□□□□ -0.99
CTNND1-227ENST00000530748 GRB10Q13322 594 aa8.84□□□□□ -0.99
CTNND1-227ENST00000530748 NBPF20Q3BBV1 942 aa8.84□□□□□ -0.99
CTNND1-227ENST00000530748 DAB2IPQ5VWQ8 1189 aa8.84□□□□□ -0.99
CTNND1-227ENST00000530748 GJB7Q6PEY0 223 aa8.84□□□□□ -0.99
CTNND1-227ENST00000530748 ATG4CQ96DT6 458 aa8.84□□□□□ -0.99
CTNND1-227ENST00000530748 COLEC11Q9BWP8 271 aa8.84□□□□□ -0.99
CTNND1-227ENST00000530748 MANSC1Q9H8J5 431 aa8.84□□□□□ -0.99
CTNND1-227ENST00000530748 OLFML3Q9NRN5 406 aa8.84□□□□□ -0.99
CTNND1-227ENST00000530748 CELF2O95319 508 aaKnown RBP8.84□□□□□ -0.99
CTNND1-227ENST00000530748 LRG1P02750 347 aa8.84□□□□□ -0.99
CTNND1-227ENST00000530748 SERPINB10P48595 397 aa8.84□□□□□ -0.99
CTNND1-227ENST00000530748 GEMP55040 296 aa8.84□□□□□ -0.99
CTNND1-227ENST00000530748 PPP4CP60510 307 aa8.84□□□□□ -0.99
CTNND1-227ENST00000530748 ZRANB3Q5FWF4 1079 aa8.84□□□□□ -0.99
CTNND1-227ENST00000530748 RNF180Q86T96 592 aa8.84□□□□□ -0.99
CTNND1-227ENST00000530748 SHCBP1Q8NEM2 672 aa8.84□□□□□ -0.99
CTNND1-227ENST00000530748 ABHD8Q96I13 439 aa8.84□□□□□ -0.99
CTNND1-227ENST00000530748 ZFYVE19Q96K21 471 aa8.84□□□□□ -0.99
CTNND1-227ENST00000530748 XPO6Q96QU8 1125 aaKnown RBP8.84□□□□□ -0.99
CTNND1-227ENST00000530748 VPS33BQ9H267 617 aa8.84□□□□□ -0.99
CTNND1-227ENST00000530748 RIC8BQ9NVN3 520 aa8.84□□□□□ -0.99
CTNND1-227ENST00000530748 MAN1A2O60476 641 aa8.84□□□□□ -0.99
CTNND1-227ENST00000530748 ANXA9O76027 345 aa8.84□□□□□ -0.99
CTNND1-227ENST00000530748 EGFRP00533 1210 aa8.84□□□□□ -0.99
CTNND1-227ENST00000530748 NAMPTP43490 491 aa8.84□□□□□ -0.99
CTNND1-227ENST00000530748 PDIA6Q15084 440 aa8.84□□□□□ -0.99
CTNND1-227ENST00000530748 SMTNL2Q2TAL5 461 aa8.84□□□□□ -0.99
CTNND1-227ENST00000530748 C3orf62Q6ZUJ4 267 aa8.84□□□□□ -0.99
CTNND1-227ENST00000530748 C4orf33Q8N1A6 199 aa8.84□□□□□ -0.99
CTNND1-227ENST00000530748 B4GALNT2Q8NHY0 566 aa8.84□□□□□ -0.99
CTNND1-227ENST00000530748 FRMD8Q9BZ67 464 aaPredicted RBP8.84□□□□□ -0.99
CTNND1-227ENST00000530748 ZNF556Q9HAH1 456 aa8.84□□□□□ -0.99
CTNND1-227ENST00000530748 GID8Q9NWU2 228 aa8.84□□□□□ -0.99
CTNND1-227ENST00000530748 GRID1Q9ULK0 1009 aa8.84□□□□□ -0.99
CTNND1-227ENST00000530748 ADGRA2Q96PE1 1338 aa8.84□□□□□ -0.99
CTNND1-227ENST00000530748 PPP1R37O75864 691 aa8.84□□□□□ -0.99
CTNND1-227ENST00000530748 RHOBTB1O94844 696 aa8.84□□□□□ -0.99
CTNND1-227ENST00000530748 SLC2A3P11169 496 aa8.84□□□□□ -0.99
CTNND1-227ENST00000530748 RAD9BQ6WBX8 426 aa8.84□□□□□ -0.99
CTNND1-227ENST00000530748 NUP93Q8N1F7 819 aa8.84□□□□□ -0.99
CTNND1-227ENST00000530748 TEX9Q8N6V9 391 aa8.84□□□□□ -0.99
CTNND1-227ENST00000530748 FAM71DQ8N9W8 422 aa8.84□□□□□ -0.99
CTNND1-227ENST00000530748 PCYOX1LQ8NBM8 494 aa8.84□□□□□ -0.99
CTNND1-227ENST00000530748 TPCN2Q8NHX9 752 aa8.84□□□□□ -0.99
CTNND1-227ENST00000530748 AAASQ9NRG9 546 aa8.84□□□□□ -0.99
CTNND1-227ENST00000530748 AGPAT3Q9NRZ7 376 aa8.84□□□□□ -0.99
CTNND1-227ENST00000530748 NWD1Q149M9 1564 aa8.84□□□□□ -1
CTNND1-227ENST00000530748 SLIT1O75093 1534 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms