RNA–Protein interactions for RNA: ENST00000530495.1

CAPN1-219, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-219ENST00000530495 DHX8Q14562 1220 aaKnown RBP16.14■□□□□ 0.17
CAPN1-219ENST00000530495 PTPAQ15257 358 aa16.14■□□□□ 0.17
CAPN1-219ENST00000530495 SLFN12LQ6IEE8 588 aa16.14■□□□□ 0.17
CAPN1-219ENST00000530495 LRRTM3Q86VH5 581 aa16.14■□□□□ 0.17
CAPN1-219ENST00000530495 WDR5BQ86VZ2 330 aa16.14■□□□□ 0.17
CAPN1-219ENST00000530495 THEM5Q8N1Q8 247 aa16.14■□□□□ 0.17
CAPN1-219ENST00000530495 FAM83CQ9BQN1 747 aa16.14■□□□□ 0.17
CAPN1-219ENST00000530495 CCSER1Q9C0I3 900 aa16.14■□□□□ 0.17
CAPN1-219ENST00000530495 GKN1Q9NS71 199 aa16.14■□□□□ 0.17
CAPN1-219ENST00000530495 DPP3Q9NY33 737 aa16.14■□□□□ 0.17
CAPN1-219ENST00000530495 STYXL1Q9Y6J8 313 aa16.14■□□□□ 0.17
CAPN1-219ENST00000530495 KMT2BQ9UMN6 2715 aaPredicted RBP16.13■□□□□ 0.17
CAPN1-219ENST00000530495 H3BQV1 296 aa16.13■□□□□ 0.17
CAPN1-219ENST00000530495 NMT1P30419 496 aaKnown RBP16.13■□□□□ 0.17
CAPN1-219ENST00000530495 HOXC13P31276 330 aa16.13■□□□□ 0.17
CAPN1-219ENST00000530495 TAF6P49848 677 aa16.13■□□□□ 0.17
CAPN1-219ENST00000530495 MCM6Q14566 821 aa16.13■□□□□ 0.17
CAPN1-219ENST00000530495 PPM1JQ5JR12 505 aa16.13■□□□□ 0.17
CAPN1-219ENST00000530495 ADALQ6DHV7 355 aa16.13■□□□□ 0.17
CAPN1-219ENST00000530495 TMEM150AQ86TG1 271 aa16.13■□□□□ 0.17
CAPN1-219ENST00000530495 CMTM8Q8IZV2 173 aa16.13■□□□□ 0.17
CAPN1-219ENST00000530495 SPPL2BQ8TCT7 592 aa16.13■□□□□ 0.17
CAPN1-219ENST00000530495 GIPC2Q8TF65 315 aa16.13■□□□□ 0.17
CAPN1-219ENST00000530495 GCNAQ96QF7 691 aa16.13■□□□□ 0.17
CAPN1-219ENST00000530495 PYM1Q9BRP8 204 aaKnown RBP16.13■□□□□ 0.17
CAPN1-219ENST00000530495 SMG9Q9H0W8 520 aaKnown RBP16.13■□□□□ 0.17
CAPN1-219ENST00000530495 ST6GALNAC4Q9H4F1 302 aa16.13■□□□□ 0.17
CAPN1-219ENST00000530495 SPTBN2O15020 2390 aa16.12■□□□□ 0.17
CAPN1-219ENST00000530495 CCDC163A0A0D9SF12 145 aa16.12■□□□□ 0.17
CAPN1-219ENST00000530495 SOBPA7XYQ1 873 aa16.12■□□□□ 0.17
CAPN1-219ENST00000530495 EXTL3O43909 919 aa16.12■□□□□ 0.17
CAPN1-219ENST00000530495 GDF9O60383 454 aa16.12■□□□□ 0.17
CAPN1-219ENST00000530495 F11P03951 625 aa16.12■□□□□ 0.17
CAPN1-219ENST00000530495 KRT18P05783 430 aaKnown RBP16.12■□□□□ 0.17
CAPN1-219ENST00000530495 GJB2P29033 226 aa16.12■□□□□ 0.17
CAPN1-219ENST00000530495 CDR1P51861 262 aa16.12■□□□□ 0.17
CAPN1-219ENST00000530495 RUNX3Q13761 415 aa16.12■□□□□ 0.17
CAPN1-219ENST00000530495 TAF12Q16514 161 aa16.12■□□□□ 0.17
CAPN1-219ENST00000530495 ZC2HC1CQ53FD0 456 aaPredicted RBP16.12■□□□□ 0.17
CAPN1-219ENST00000530495 TMEM196Q5HYL7 178 aa16.12■□□□□ 0.17
CAPN1-219ENST00000530495 WSCD1Q658N2 575 aa16.12■□□□□ 0.17
CAPN1-219ENST00000530495 CEP68Q76N32 757 aa16.12■□□□□ 0.17
CAPN1-219ENST00000530495 RAD54LQ92698 747 aa16.12■□□□□ 0.17
CAPN1-219ENST00000530495 ZHX3Q9H4I2 956 aa16.12■□□□□ 0.17
CAPN1-219ENST00000530495 AGO2Q9UKV8 859 aaKnown RBP16.12■□□□□ 0.17
CAPN1-219ENST00000530495 ZNF638Q14966 1978 aaKnown RBP16.12■□□□□ 0.17
CAPN1-219ENST00000530495 GREB1Q4ZG55 1949 aa16.11■□□□□ 0.17
CAPN1-219ENST00000530495 KPNA7A9QM74 516 aa16.11■□□□□ 0.17
CAPN1-219ENST00000530495 TISP43B9A030 160 aa16.11■□□□□ 0.17
CAPN1-219ENST00000530495 TRDMT1O14717 391 aaKnown RBP16.11■□□□□ 0.17
CAPN1-219ENST00000530495 ATG13O75143 517 aa16.11■□□□□ 0.17
CAPN1-219ENST00000530495 TBCAO75347 108 aaKnown RBP16.11■□□□□ 0.17
CAPN1-219ENST00000530495 KRT37O76014 449 aa16.11■□□□□ 0.17
CAPN1-219ENST00000530495 HMGA1P17096 107 aaKnown RBP16.11■□□□□ 0.17
CAPN1-219ENST00000530495 PLCG1P19174 1290 aa16.11■□□□□ 0.17
CAPN1-219ENST00000530495 DDIT3P35638 169 aa16.11■□□□□ 0.17
CAPN1-219ENST00000530495 LONP1P36776 959 aaKnown RBP16.11■□□□□ 0.17
CAPN1-219ENST00000530495 NLRP12P59046 1061 aa16.11■□□□□ 0.17
CAPN1-219ENST00000530495 KARSQ15046 597 aaKnown RBP16.11■□□□□ 0.17
CAPN1-219ENST00000530495 RABEP1Q15276 862 aa16.11■□□□□ 0.17
CAPN1-219ENST00000530495 FSTL4Q6MZW2 842 aa16.11■□□□□ 0.17
CAPN1-219ENST00000530495 CRELD2Q6UXH1 353 aaPredicted RBP16.11■□□□□ 0.17
CAPN1-219ENST00000530495 DCP1BQ8IZD4 617 aaKnown RBP16.11■□□□□ 0.17
CAPN1-219ENST00000530495 MAB21L3Q8N8X9 362 aa16.11■□□□□ 0.17
CAPN1-219ENST00000530495 GAB3Q8WWW8 586 aa16.11■□□□□ 0.17
CAPN1-219ENST00000530495 DDX1Q92499 740 aaKnown RBP16.11■□□□□ 0.17
CAPN1-219ENST00000530495 LOXL4Q96JB6 756 aa16.11■□□□□ 0.17
CAPN1-219ENST00000530495 TMX3Q96JJ7 454 aa16.11■□□□□ 0.17
CAPN1-219ENST00000530495 HPS4Q9NQG7 708 aa16.11■□□□□ 0.17
CAPN1-219ENST00000530495 OBSL1O75147 1896 aa16.1■□□□□ 0.17
CAPN1-219ENST00000530495 OTOL1A6NHN0 477 aaPredicted RBP16.1■□□□□ 0.17
CAPN1-219ENST00000530495 DDX6P26196 483 aaKnown RBP eCLIP16.1■□□□□ 0.17
CAPN1-219ENST00000530495 AVPR1AP37288 418 aa16.1■□□□□ 0.17
CAPN1-219ENST00000530495 RAP1GAPP47736 663 aa16.1■□□□□ 0.17
CAPN1-219ENST00000530495 LIMK1P53667 647 aa16.1■□□□□ 0.17
CAPN1-219ENST00000530495 GRIN1Q05586 938 aa16.1■□□□□ 0.17
CAPN1-219ENST00000530495 GRSF1Q12849 480 aaKnown RBP eCLIP16.1■□□□□ 0.17
CAPN1-219ENST00000530495 SV2CQ496J9 727 aa16.1■□□□□ 0.17
CAPN1-219ENST00000530495 PKN3Q6P5Z2 889 aa16.1■□□□□ 0.17
CAPN1-219ENST00000530495 ZNF720Q7Z2F6 126 aa16.1■□□□□ 0.17
CAPN1-219ENST00000530495 CACNA2D4Q7Z3S7 1137 aa16.1■□□□□ 0.17
CAPN1-219ENST00000530495 NT5DC4Q86YG4 428 aa16.1■□□□□ 0.17
CAPN1-219ENST00000530495 USP13Q92995 863 aaPredicted RBP16.1■□□□□ 0.17
CAPN1-219ENST00000530495 CHFRQ96EP1 664 aa16.1■□□□□ 0.17
CAPN1-219ENST00000530495 EBF3Q9H4W6 596 aa16.1■□□□□ 0.17
CAPN1-219ENST00000530495 TDP1Q9NUW8 608 aa16.1■□□□□ 0.17
CAPN1-219ENST00000530495 ABI2Q9NYB9 513 aaPredicted RBP16.1■□□□□ 0.17
CAPN1-219ENST00000530495 CCL26Q9Y258 94 aa16.1■□□□□ 0.17
CAPN1-219ENST00000530495 PCDHB5Q9Y5E4 795 aa16.1■□□□□ 0.17
CAPN1-219ENST00000530495 EPG5Q9HCE0 2579 aa16.09■□□□□ 0.17
CAPN1-219ENST00000530495 TM4SF5O14894 197 aa16.09■□□□□ 0.17
CAPN1-219ENST00000530495 AXIN1O15169 862 aa16.09■□□□□ 0.17
CAPN1-219ENST00000530495 IL18RAPO95256 599 aa16.09■□□□□ 0.17
CAPN1-219ENST00000530495 BMP15O95972 392 aa16.09■□□□□ 0.17
CAPN1-219ENST00000530495 ZNF806P0C7X5 589 aa16.09■□□□□ 0.17
CAPN1-219ENST00000530495 ADSSP30520 456 aa16.09■□□□□ 0.17
CAPN1-219ENST00000530495 AMPD2Q01433 879 aa16.09■□□□□ 0.17
CAPN1-219ENST00000530495 POSTNQ15063 836 aa16.09■□□□□ 0.17
CAPN1-219ENST00000530495 C8orf34Q49A92 452 aa16.09■□□□□ 0.17
CAPN1-219ENST00000530495 MON1AQ86VX9 555 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms