RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 PCSK1P29120 753 aa13.58□□□□□ -0.24
CCDC90B-216ENST00000529856 GCLMP48507 274 aa13.58□□□□□ -0.24
CCDC90B-216ENST00000529856 NTHL1P78549 312 aa13.58□□□□□ -0.24
CCDC90B-216ENST00000529856 TSPY1Q01534 308 aa13.58□□□□□ -0.24
CCDC90B-216ENST00000529856 TWF1Q12792 350 aa13.58□□□□□ -0.24
CCDC90B-216ENST00000529856 OTOP3Q7RTS5 596 aa13.58□□□□□ -0.24
CCDC90B-216ENST00000529856 FILIP1Q7Z7B0 1213 aa13.58□□□□□ -0.24
CCDC90B-216ENST00000529856 RNF135Q8IUD6 432 aa13.58□□□□□ -0.24
CCDC90B-216ENST00000529856 ZDHHC14Q8IZN3 488 aa13.58□□□□□ -0.24
CCDC90B-216ENST00000529856 PLCD3Q8N3E9 789 aa13.58□□□□□ -0.24
CCDC90B-216ENST00000529856 C2orf15Q8WU43 125 aaKnown RBP13.58□□□□□ -0.24
CCDC90B-216ENST00000529856 TAF4BQ92750 862 aa13.58□□□□□ -0.24
CCDC90B-216ENST00000529856 KHSRPQ92945 711 aaKnown RBP eCLIP13.58□□□□□ -0.24
CCDC90B-216ENST00000529856 ACSF2Q96CM8 615 aaPredicted RBP13.58□□□□□ -0.24
CCDC90B-216ENST00000529856 PKMYT1Q99640 499 aa13.58□□□□□ -0.24
CCDC90B-216ENST00000529856 CRISPLD1Q9H336 500 aa13.58□□□□□ -0.24
CCDC90B-216ENST00000529856 TMEM8AQ9HCN3 771 aa13.58□□□□□ -0.24
CCDC90B-216ENST00000529856 HCFC1R1Q9NWW0 138 aa13.58□□□□□ -0.24
CCDC90B-216ENST00000529856 DNMT3BQ9UBC3 853 aaKnown RBP13.58□□□□□ -0.24
CCDC90B-216ENST00000529856 NXF1Q9UBU9 619 aaKnown RBP13.58□□□□□ -0.24
CCDC90B-216ENST00000529856 POLIQ9UNA4 740 aa13.58□□□□□ -0.24
CCDC90B-216ENST00000529856 CTNND2Q9UQB3 1225 aa13.58□□□□□ -0.24
CCDC90B-216ENST00000529856 SLC27A5Q9Y2P5 690 aa13.58□□□□□ -0.24
CCDC90B-216ENST00000529856 NOTCH4Q99466 2003 aa13.57□□□□□ -0.24
CCDC90B-216ENST00000529856 BDP1A6H8Y1 2624 aa13.57□□□□□ -0.24
CCDC90B-216ENST00000529856 HCRTO43612 131 aa13.57□□□□□ -0.24
CCDC90B-216ENST00000529856 STX10O60499 249 aa13.57□□□□□ -0.24
CCDC90B-216ENST00000529856 ASS1P00966 412 aaKnown RBP13.57□□□□□ -0.24
CCDC90B-216ENST00000529856 HLA-DRAP01903 254 aa13.57□□□□□ -0.24
CCDC90B-216ENST00000529856 FSHRP23945 695 aa13.57□□□□□ -0.24
CCDC90B-216ENST00000529856 LMO2P25791 158 aa13.57□□□□□ -0.24
CCDC90B-216ENST00000529856 GNL1P36915 607 aaPredicted RBP13.57□□□□□ -0.24
CCDC90B-216ENST00000529856 TUFMP49411 452 aaKnown RBP13.57□□□□□ -0.24
CCDC90B-216ENST00000529856 STX17P56962 302 aa13.57□□□□□ -0.24
CCDC90B-216ENST00000529856 PAK1Q13153 545 aa13.57□□□□□ -0.24
CCDC90B-216ENST00000529856 ZNF699Q32M78 642 aa13.57□□□□□ -0.24
CCDC90B-216ENST00000529856 ZNF667Q5HYK9 610 aa13.57□□□□□ -0.24
CCDC90B-216ENST00000529856 INTS6LQ5JSJ4 861 aaKnown RBP13.57□□□□□ -0.24
CCDC90B-216ENST00000529856 KRT39Q6A163 491 aa13.57□□□□□ -0.24
CCDC90B-216ENST00000529856 FRMD5Q7Z6J6 570 aa13.57□□□□□ -0.24
CCDC90B-216ENST00000529856 TDRD5Q8NAT2 981 aaKnown RBP13.57□□□□□ -0.24
CCDC90B-216ENST00000529856 MLKLQ8NB16 471 aa13.57□□□□□ -0.24
CCDC90B-216ENST00000529856 SPPL2BQ8TCT7 592 aa13.57□□□□□ -0.24
CCDC90B-216ENST00000529856 TAS1R2Q8TE23 839 aa13.57□□□□□ -0.24
CCDC90B-216ENST00000529856 ZNF512Q96ME7 567 aaPredicted RBP13.57□□□□□ -0.24
CCDC90B-216ENST00000529856 MRPL45Q9BRJ2 306 aaKnown RBP13.57□□□□□ -0.24
CCDC90B-216ENST00000529856 SNX25Q9H3E2 840 aa13.57□□□□□ -0.24
CCDC90B-216ENST00000529856 METTL14Q9HCE5 456 aaKnown RBP13.57□□□□□ -0.24
CCDC90B-216ENST00000529856 TMLHEQ9NVH6 421 aa13.57□□□□□ -0.24
CCDC90B-216ENST00000529856 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.57□□□□□ -0.24
CCDC90B-216ENST00000529856 CEP72Q9P209 647 aa13.57□□□□□ -0.24
CCDC90B-216ENST00000529856 ARMCX3Q9UH62 379 aaPredicted RBP13.57□□□□□ -0.24
CCDC90B-216ENST00000529856 CDH9Q9ULB4 789 aa13.57□□□□□ -0.24
CCDC90B-216ENST00000529856 YIPF1Q9Y548 306 aa13.57□□□□□ -0.24
CCDC90B-216ENST00000529856 MUC3AQ02505 3323 aa13.56□□□□□ -0.24
CCDC90B-216ENST00000529856 N4BP1O75113 896 aaKnown RBP13.56□□□□□ -0.24
CCDC90B-216ENST00000529856 RHOP08100 348 aa13.56□□□□□ -0.24
CCDC90B-216ENST00000529856 PDGFRBP09619 1106 aa13.56□□□□□ -0.24
CCDC90B-216ENST00000529856 HAPLN1P10915 354 aaPredicted RBP13.56□□□□□ -0.24
CCDC90B-216ENST00000529856 PIK3CAP42336 1068 aa13.56□□□□□ -0.24
CCDC90B-216ENST00000529856 ALDH1A3P47895 512 aa13.56□□□□□ -0.24
CCDC90B-216ENST00000529856 CDR1P51861 262 aa13.56□□□□□ -0.24
CCDC90B-216ENST00000529856 EPHB3P54753 998 aa13.56□□□□□ -0.24
CCDC90B-216ENST00000529856 PLD1Q13393 1074 aa13.56□□□□□ -0.24
CCDC90B-216ENST00000529856 NFE2Q16621 373 aaPredicted RBP13.56□□□□□ -0.24
CCDC90B-216ENST00000529856 PABPC1LQ4VXU2 614 aaKnown RBP13.56□□□□□ -0.24
CCDC90B-216ENST00000529856 FAM171BQ6P995 826 aa13.56□□□□□ -0.24
CCDC90B-216ENST00000529856 ELMOD1Q8N336 334 aa13.56□□□□□ -0.24
CCDC90B-216ENST00000529856 TTC9BQ8N6N2 239 aa13.56□□□□□ -0.24
CCDC90B-216ENST00000529856 OR6B3Q8NGW1 331 aa13.56□□□□□ -0.24
CCDC90B-216ENST00000529856 ELMO3Q96BJ8 720 aa13.56□□□□□ -0.24
CCDC90B-216ENST00000529856 MYADMQ96S97 322 aa13.56□□□□□ -0.24
CCDC90B-216ENST00000529856 MMRN2Q9H8L6 949 aa13.56□□□□□ -0.24
CCDC90B-216ENST00000529856 AVENQ9NQS1 362 aaPredicted RBP13.56□□□□□ -0.24
CCDC90B-216ENST00000529856 LIMD1Q9UGP4 676 aa13.56□□□□□ -0.24
CCDC90B-216ENST00000529856 RWDD2AQ9UIY3 292 aa13.56□□□□□ -0.24
CCDC90B-216ENST00000529856 GTF3C4Q9UKN8 822 aa13.56□□□□□ -0.24
CCDC90B-216ENST00000529856 NME7Q9Y5B8 376 aa13.56□□□□□ -0.24
CCDC90B-216ENST00000529856 PCDHB5Q9Y5E4 795 aa13.56□□□□□ -0.24
CCDC90B-216ENST00000529856 CUL9Q8IWT3 2517 aa13.56□□□□□ -0.24
CCDC90B-216ENST00000529856 MYO10Q9HD67 2058 aa13.55□□□□□ -0.24
CCDC90B-216ENST00000529856 MYBPHLA2RUH7 354 aa13.55□□□□□ -0.24
CCDC90B-216ENST00000529856 PI4K2BG5E9Z4 385 aa13.55□□□□□ -0.24
CCDC90B-216ENST00000529856 ATP2C2O75185 946 aa13.55□□□□□ -0.24
CCDC90B-216ENST00000529856 SOAT2O75908 522 aa13.55□□□□□ -0.24
CCDC90B-216ENST00000529856 P4HA1P13674 534 aa13.55□□□□□ -0.24
CCDC90B-216ENST00000529856 GBP2P32456 591 aaPredicted RBP13.55□□□□□ -0.24
CCDC90B-216ENST00000529856 CDH8P55286 799 aa13.55□□□□□ -0.24
CCDC90B-216ENST00000529856 MGAT5BQ3V5L5 792 aa13.55□□□□□ -0.24
CCDC90B-216ENST00000529856 DCAF17Q5H9S7 520 aaPredicted RBP13.55□□□□□ -0.24
CCDC90B-216ENST00000529856 TCERG1LQ5VWI1 586 aa13.55□□□□□ -0.24
CCDC90B-216ENST00000529856 IQCEQ6IPM2 695 aa13.55□□□□□ -0.24
CCDC90B-216ENST00000529856 SPOPLQ6IQ16 392 aa13.55□□□□□ -0.24
CCDC90B-216ENST00000529856 GET4Q7L5D6 327 aaPredicted RBP13.55□□□□□ -0.24
CCDC90B-216ENST00000529856 ITFG1Q8TB96 612 aa13.55□□□□□ -0.24
CCDC90B-216ENST00000529856 SLC35C1Q96A29 364 aa13.55□□□□□ -0.24
CCDC90B-216ENST00000529856 SYT15Q9BQS2 421 aa13.55□□□□□ -0.24
CCDC90B-216ENST00000529856 CORO1BQ9BR76 489 aa13.55□□□□□ -0.24
CCDC90B-216ENST00000529856 PI4K2AQ9BTU6 479 aa13.55□□□□□ -0.24
CCDC90B-216ENST00000529856 SRRTQ9BXP5 876 aaKnown RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms