RNA–Protein interactions for RNA: ENST00000528475.1

GSDMD-208, Transcript of gasdermin D, human

TSL 2

Gene GSDMD, Length 2,067 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GSDMD-208	ENST00000528475	MCEE	Q96PE7	176 aa		24.68	■■□□□ 1.54
GSDMD-208	ENST00000528475	SLC24A2	Q9UI40	661 aa		24.68	■■□□□ 1.54
GSDMD-208	ENST00000528475	ADCY3	O60266	1144 aa		24.68	■■□□□ 1.54
GSDMD-208	ENST00000528475	PTPRA	P18433	802 aa		24.68	■■□□□ 1.54
GSDMD-208	ENST00000528475	NF2	P35240	595 aa		24.68	■■□□□ 1.54
GSDMD-208	ENST00000528475	CDKN2B	P42772	138 aa		24.68	■■□□□ 1.54
GSDMD-208	ENST00000528475	OGDH	Q02218	1023 aa		24.68	■■□□□ 1.54
GSDMD-208	ENST00000528475	SPARCL1	Q14515	664 aa		24.68	■■□□□ 1.54
GSDMD-208	ENST00000528475	E2F5	Q15329	346 aa		24.68	■■□□□ 1.54
GSDMD-208	ENST00000528475	TARBP2	Q15633	366 aa	Known RBP	24.68	■■□□□ 1.54
GSDMD-208	ENST00000528475	ECHDC2	Q86YB7	292 aa		24.68	■■□□□ 1.54
GSDMD-208	ENST00000528475	CCDC125	Q86Z20	511 aa		24.68	■■□□□ 1.54
GSDMD-208	ENST00000528475	TRABD	Q9H4I3	376 aa		24.68	■■□□□ 1.54
GSDMD-208	ENST00000528475	EBF2	Q9HAK2	575 aa		24.68	■■□□□ 1.54
GSDMD-208	ENST00000528475	PNMA3	Q9UL41	463 aa		24.68	■■□□□ 1.54
GSDMD-208	ENST00000528475	PCDHGC3	Q9UN70	934 aa		24.68	■■□□□ 1.54
GSDMD-208	ENST00000528475	EFR3B	Q9Y2G0	817 aa		24.68	■■□□□ 1.54
GSDMD-208	ENST00000528475	DYNC1LI1	Q9Y6G9	523 aa	Known RBP	24.68	■■□□□ 1.54
GSDMD-208	ENST00000528475	LCT	P09848	1927 aa		24.67	■■□□□ 1.54
GSDMD-208	ENST00000528475	C19orf81	C9J6K1	198 aa		24.67	■■□□□ 1.54
GSDMD-208	ENST00000528475		F8VP50	259 aa		24.67	■■□□□ 1.54
GSDMD-208	ENST00000528475	ZBTB7A	O95365	584 aa		24.67	■■□□□ 1.54
GSDMD-208	ENST00000528475	STXBP2	Q15833	593 aa		24.67	■■□□□ 1.54
GSDMD-208	ENST00000528475	ZFYVE27	Q5T4F4	411 aa		24.67	■■□□□ 1.54
GSDMD-208	ENST00000528475	NBPF12	Q5TAG4	269 aa	Predicted RBP	24.67	■■□□□ 1.54
GSDMD-208	ENST00000528475	CENPU	Q71F23	418 aa		24.67	■■□□□ 1.54
GSDMD-208	ENST00000528475	POLN	Q7Z5Q5	900 aa		24.67	■■□□□ 1.54
GSDMD-208	ENST00000528475	FETUB	Q9UGM5	382 aa		24.67	■■□□□ 1.54
GSDMD-208	ENST00000528475	FAM189A1	O60320	539 aa		24.66	■■□□□ 1.54
GSDMD-208	ENST00000528475	CST3	P01034	146 aa	Predicted RBP	24.66	■■□□□ 1.54
GSDMD-208	ENST00000528475	EIF4B	P23588	611 aa	Known RBP	24.66	■■□□□ 1.54
GSDMD-208	ENST00000528475	CAPS	Q13938	189 aa		24.66	■■□□□ 1.54
GSDMD-208	ENST00000528475	WDR72	Q3MJ13	1102 aa		24.66	■■□□□ 1.54
GSDMD-208	ENST00000528475	DCUN1D2	Q6PH85	259 aa		24.66	■■□□□ 1.54
GSDMD-208	ENST00000528475	ANKLE1	Q8NAG6	615 aa		24.66	■■□□□ 1.54
GSDMD-208	ENST00000528475	SLC35B2	Q8TB61	432 aa		24.66	■■□□□ 1.54
GSDMD-208	ENST00000528475	FRMD8P1	Q9BZ68	369 aa	Predicted RBP	24.66	■■□□□ 1.54
GSDMD-208	ENST00000528475	PIM2	Q9P1W9	311 aa		24.66	■■□□□ 1.54
GSDMD-208	ENST00000528475	EPB41L3	Q9Y2J2	1087 aa	Predicted RBP	24.66	■■□□□ 1.54
GSDMD-208	ENST00000528475	ETS1	P14921	441 aa		24.66	■■□□□ 1.54
GSDMD-208	ENST00000528475	TLDC1	Q6P9B6	456 aa		24.66	■■□□□ 1.54
GSDMD-208	ENST00000528475	CATSPERG	Q6ZRH7	1159 aa		24.66	■■□□□ 1.54
GSDMD-208	ENST00000528475	PCGF5	Q86SE9	256 aa		24.66	■■□□□ 1.54
GSDMD-208	ENST00000528475	DNER	Q8NFT8	737 aa		24.66	■■□□□ 1.54
GSDMD-208	ENST00000528475	NIF3L1	Q9GZT8	377 aa		24.66	■■□□□ 1.54
GSDMD-208	ENST00000528475	CXorf56	Q9H5V9	222 aa		24.66	■■□□□ 1.54
GSDMD-208	ENST00000528475	SSU72	Q9NP77	194 aa	Known RBP	24.66	■■□□□ 1.54
GSDMD-208	ENST00000528475	PICK1	Q9NRD5	415 aa		24.66	■■□□□ 1.54
GSDMD-208	ENST00000528475	HMGCS2	P54868	508 aa		24.65	■■□□□ 1.54
GSDMD-208	ENST00000528475	ADCY1	Q08828	1119 aa		24.65	■■□□□ 1.54
GSDMD-208	ENST00000528475	FASTKD3	Q14CZ7	662 aa	Known RBP	24.65	■■□□□ 1.54
GSDMD-208	ENST00000528475	PDK4	Q16654	411 aa		24.65	■■□□□ 1.54
GSDMD-208	ENST00000528475	JDP2	Q8WYK2	163 aa		24.65	■■□□□ 1.54
GSDMD-208	ENST00000528475	PRCC	Q92733	491 aa	Predicted RBP	24.65	■■□□□ 1.54
GSDMD-208	ENST00000528475	SMC6	Q96SB8	1091 aa		24.65	■■□□□ 1.54
GSDMD-208	ENST00000528475	UNC5C	O95185	931 aa		24.65	■■□□□ 1.54
GSDMD-208	ENST00000528475	KRT16	P08779	473 aa		24.65	■■□□□ 1.54
GSDMD-208	ENST00000528475	BRD2	P25440	801 aa	Known RBP	24.65	■■□□□ 1.54
GSDMD-208	ENST00000528475	ELF1	P32519	619 aa		24.65	■■□□□ 1.54
GSDMD-208	ENST00000528475	YARS	P54577	528 aa	Known RBP	24.65	■■□□□ 1.54
GSDMD-208	ENST00000528475	PKN2	Q16513	984 aa	Known RBP	24.65	■■□□□ 1.54
GSDMD-208	ENST00000528475	SGSM1	Q2NKQ1	1148 aa		24.65	■■□□□ 1.54
GSDMD-208	ENST00000528475	TXNRD3NB	Q6F5E7	133 aa		24.65	■■□□□ 1.54
GSDMD-208	ENST00000528475	WDTC1	Q8N5D0	677 aa		24.65	■■□□□ 1.54
GSDMD-208	ENST00000528475	FBF1	Q8TES7	1133 aa		24.65	■■□□□ 1.54
GSDMD-208	ENST00000528475	L3MBTL3	Q96JM7	780 aa	Predicted RBP	24.65	■■□□□ 1.54
GSDMD-208	ENST00000528475	CISH	Q9NSE2	258 aa		24.65	■■□□□ 1.54
GSDMD-208	ENST00000528475	HACL1	Q9UJ83	578 aa		24.65	■■□□□ 1.54
GSDMD-208	ENST00000528475	FARP1	Q9Y4F1	1045 aa	Predicted RBP	24.65	■■□□□ 1.54
GSDMD-208	ENST00000528475	POC1B-GALNT4	F8VUJ3	575 aa		24.64	■■□□□ 1.53
GSDMD-208	ENST00000528475	SPAG7	O75391	227 aa		24.64	■■□□□ 1.53
GSDMD-208	ENST00000528475	ATP5H	O75947	161 aa		24.64	■■□□□ 1.53
GSDMD-208	ENST00000528475	SURF1	Q15526	300 aa		24.64	■■□□□ 1.53
GSDMD-208	ENST00000528475	EFHC2	Q5JST6	749 aa		24.64	■■□□□ 1.53
GSDMD-208	ENST00000528475	SCARA3	Q6AZY7	606 aa		24.64	■■□□□ 1.53
GSDMD-208	ENST00000528475	VPS37B	Q9H9H4	285 aa		24.64	■■□□□ 1.53
GSDMD-208	ENST00000528475	NRBP2	Q9NSY0	501 aa		24.64	■■□□□ 1.53
GSDMD-208	ENST00000528475	USH1C	Q9Y6N9	552 aa		24.64	■■□□□ 1.53
GSDMD-208	ENST00000528475	LRRD1	A4D1F6	860 aa		24.63	■■□□□ 1.53
GSDMD-208	ENST00000528475	CCND1	P24385	295 aa		24.63	■■□□□ 1.53
GSDMD-208	ENST00000528475	EFNA5	P52803	228 aa		24.63	■■□□□ 1.53
GSDMD-208	ENST00000528475	MOGS	Q13724	837 aa		24.63	■■□□□ 1.53
GSDMD-208	ENST00000528475	SEZ6	Q53EL9	994 aa		24.63	■■□□□ 1.53
GSDMD-208	ENST00000528475	ZC3H12A	Q5D1E8	599 aa	Known RBP	24.63	■■□□□ 1.53
GSDMD-208	ENST00000528475	GPAT2	Q6NUI2	795 aa		24.63	■■□□□ 1.53
GSDMD-208	ENST00000528475	ERICH1	Q86X53	443 aa		24.63	■■□□□ 1.53
GSDMD-208	ENST00000528475	ZBED8	Q8IZ13	594 aa		24.63	■■□□□ 1.53
GSDMD-208	ENST00000528475	AGAP11	Q8TF27	550 aa		24.63	■■□□□ 1.53
GSDMD-208	ENST00000528475	TBC1D31	Q96DN5	1066 aa		24.63	■■□□□ 1.53
GSDMD-208	ENST00000528475	TXLNG	Q9NUQ3	528 aa		24.63	■■□□□ 1.53
GSDMD-208	ENST00000528475	PSMC3IP	Q9P2W1	217 aa	Predicted RBP	24.63	■■□□□ 1.53
GSDMD-208	ENST00000528475	STRIP2	Q9ULQ0	834 aa		24.63	■■□□□ 1.53
GSDMD-208	ENST00000528475	PHTF1	Q9UMS5	762 aa		24.63	■■□□□ 1.53
GSDMD-208	ENST00000528475	C3orf70	A6NLC5	250 aa	Predicted RBP	24.63	■■□□□ 1.53
GSDMD-208	ENST00000528475	TYROBP	O43914	113 aa		24.63	■■□□□ 1.53
GSDMD-208	ENST00000528475	TOM1L1	O75674	476 aa		24.63	■■□□□ 1.53
GSDMD-208	ENST00000528475	KRT15	P19012	456 aa		24.63	■■□□□ 1.53
GSDMD-208	ENST00000528475	TNFSF9	P41273	254 aa		24.63	■■□□□ 1.53
GSDMD-208	ENST00000528475	MSH2	P43246	934 aa		24.63	■■□□□ 1.53
GSDMD-208	ENST00000528475	MYL6	P60660	151 aa		24.63	■■□□□ 1.53

Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms