RNA–Protein interactions for RNA: ENST00000527962.5

CTTN-212, Transcript of cortactin, humanhuman

TSL 2

Gene CTTN, Length 587 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-212ENST00000527962 MKNK1Q9BUB5 465 aa17.02■□□□□ 0.32
CTTN-212ENST00000527962 DPP3Q9NY33 737 aa17.02■□□□□ 0.32
CTTN-212ENST00000527962 SLC8A2Q9UPR5 921 aa17.02■□□□□ 0.32
CTTN-212ENST00000527962 CCDC163A0A0D9SF12 145 aa17.01■□□□□ 0.31
CTTN-212ENST00000527962 ANO9A1A5B4 782 aa17.01■□□□□ 0.31
CTTN-212ENST00000527962 PPEF2O14830 753 aa17.01■□□□□ 0.31
CTTN-212ENST00000527962 NFICP08651 508 aa17.01■□□□□ 0.31
CTTN-212ENST00000527962 LONP1P36776 959 aaKnown RBP17.01■□□□□ 0.31
CTTN-212ENST00000527962 PNPLA4P41247 253 aa17.01■□□□□ 0.31
CTTN-212ENST00000527962 ACOT2P49753 483 aa17.01■□□□□ 0.31
CTTN-212ENST00000527962 CYP4F8P98187 520 aa17.01■□□□□ 0.31
CTTN-212ENST00000527962 GTF2BQ00403 316 aa17.01■□□□□ 0.31
CTTN-212ENST00000527962 TSPY1Q01534 308 aa17.01■□□□□ 0.31
CTTN-212ENST00000527962 DMWDQ09019 674 aa17.01■□□□□ 0.31
CTTN-212ENST00000527962 POSTNQ15063 836 aa17.01■□□□□ 0.31
CTTN-212ENST00000527962 RABEP1Q15276 862 aa17.01■□□□□ 0.31
CTTN-212ENST00000527962 SV2CQ496J9 727 aa17.01■□□□□ 0.31
CTTN-212ENST00000527962 AASDHQ4L235 1098 aaPredicted RBP17.01■□□□□ 0.31
CTTN-212ENST00000527962 CACNA2D4Q7Z3S7 1137 aa17.01■□□□□ 0.31
CTTN-212ENST00000527962 FAM160A2Q8N612 972 aaPredicted RBP17.01■□□□□ 0.31
CTTN-212ENST00000527962 TTC9BQ8N6N2 239 aa17.01■□□□□ 0.31
CTTN-212ENST00000527962 KRI1Q8N9T8 703 aaKnown RBP17.01■□□□□ 0.31
CTTN-212ENST00000527962 LRRC3BQ96PB8 259 aa17.01■□□□□ 0.31
CTTN-212ENST00000527962 KIF9Q9HAQ2 790 aa17.01■□□□□ 0.31
CTTN-212ENST00000527962 GKN1Q9NS71 199 aa17.01■□□□□ 0.31
CTTN-212ENST00000527962 AGO2Q9UKV8 859 aaKnown RBP17.01■□□□□ 0.31
CTTN-212ENST00000527962 RPP40O75818 363 aaKnown RBP17■□□□□ 0.31
CTTN-212ENST00000527962 PRAMEF12O95522 483 aa17■□□□□ 0.31
CTTN-212ENST00000527962 CCDC192P0DO97 292 aa17■□□□□ 0.31
CTTN-212ENST00000527962 HAPLN1P10915 354 aaPredicted RBP17■□□□□ 0.31
CTTN-212ENST00000527962 TNK2Q07912 1038 aa17■□□□□ 0.31
CTTN-212ENST00000527962 SRSF5Q13243 272 aaKnown RBP17■□□□□ 0.31
CTTN-212ENST00000527962 RUNX3Q13761 415 aa17■□□□□ 0.31
CTTN-212ENST00000527962 NFE2Q16621 373 aaPredicted RBP17■□□□□ 0.31
CTTN-212ENST00000527962 NT5DC4Q86YG4 428 aa17■□□□□ 0.31
CTTN-212ENST00000527962 TMEM130Q8N3G9 435 aa17■□□□□ 0.31
CTTN-212ENST00000527962 GIPC2Q8TF65 315 aa17■□□□□ 0.31
CTTN-212ENST00000527962 MRPS31Q92665 395 aaKnown RBP17■□□□□ 0.31
CTTN-212ENST00000527962 CHAMP1Q96JM3 812 aa17■□□□□ 0.31
CTTN-212ENST00000527962 ZNF560Q96MR9 790 aa17■□□□□ 0.31
CTTN-212ENST00000527962 SLC46A2Q9BY10 475 aa17■□□□□ 0.31
CTTN-212ENST00000527962 CCSER1Q9C0I3 900 aa17■□□□□ 0.31
CTTN-212ENST00000527962 ABI2Q9NYB9 513 aaPredicted RBP17■□□□□ 0.31
CTTN-212ENST00000527962 PCDHB5Q9Y5E4 795 aa17■□□□□ 0.31
CTTN-212ENST00000527962 KPNA7A9QM74 516 aa16.99■□□□□ 0.31
CTTN-212ENST00000527962 IL18RAPO95256 599 aa16.99■□□□□ 0.31
CTTN-212ENST00000527962 CSH1P0DML2 217 aa16.99■□□□□ 0.31
CTTN-212ENST00000527962 CSH2P0DML3 217 aa16.99■□□□□ 0.31
CTTN-212ENST00000527962 ATF6P18850 670 aa16.99■□□□□ 0.31
CTTN-212ENST00000527962 CAMKK1Q8N5S9 505 aa16.99■□□□□ 0.31
CTTN-212ENST00000527962 MAB21L3Q8N8X9 362 aa16.99■□□□□ 0.31
CTTN-212ENST00000527962 CCDC26Q8TAB7 109 aa16.99■□□□□ 0.31
CTTN-212ENST00000527962 GAB3Q8WWW8 586 aa16.99■□□□□ 0.31
CTTN-212ENST00000527962 RAD54LQ92698 747 aa16.99■□□□□ 0.31
CTTN-212ENST00000527962 KIF2CQ99661 725 aa16.99■□□□□ 0.31
CTTN-212ENST00000527962 ST6GALNAC4Q9H4F1 302 aa16.99■□□□□ 0.31
CTTN-212ENST00000527962 IL21Q9HBE4 155 aa16.99■□□□□ 0.31
CTTN-212ENST00000527962 TDP1Q9NUW8 608 aa16.99■□□□□ 0.31
CTTN-212ENST00000527962 UXTQ9UBK9 157 aaPredicted RBP16.99■□□□□ 0.31
CTTN-212ENST00000527962 EXOC7Q9UPT5 735 aa16.99■□□□□ 0.31
CTTN-212ENST00000527962 TICRRQ7Z2Z1 1910 aa16.99■□□□□ 0.31
CTTN-212ENST00000527962 TULP1O00294 542 aaPredicted RBP16.98■□□□□ 0.31
CTTN-212ENST00000527962 TRDMT1O14717 391 aaKnown RBP16.98■□□□□ 0.31
CTTN-212ENST00000527962 AKAP3O75969 853 aa16.98■□□□□ 0.31
CTTN-212ENST00000527962 PLCG1P19174 1290 aa16.98■□□□□ 0.31
CTTN-212ENST00000527962 KCNA4P22459 653 aa16.98■□□□□ 0.31
CTTN-212ENST00000527962 GJB2P29033 226 aa16.98■□□□□ 0.31
CTTN-212ENST00000527962 NMT1P30419 496 aaKnown RBP16.98■□□□□ 0.31
CTTN-212ENST00000527962 DDIT3P35638 169 aa16.98■□□□□ 0.31
CTTN-212ENST00000527962 RPL10AP62906 217 aaKnown RBP16.98■□□□□ 0.31
CTTN-212ENST00000527962 MCM6Q14566 821 aa16.98■□□□□ 0.31
CTTN-212ENST00000527962 PDGFRLQ15198 375 aa16.98■□□□□ 0.31
CTTN-212ENST00000527962 FBXO43Q4G163 708 aa16.98■□□□□ 0.31
CTTN-212ENST00000527962 TMEM196Q5HYL7 178 aa16.98■□□□□ 0.31
CTTN-212ENST00000527962 WSCD1Q658N2 575 aa16.98■□□□□ 0.31
CTTN-212ENST00000527962 CACTINQ8WUQ7 758 aaKnown RBP16.98■□□□□ 0.31
CTTN-212ENST00000527962 POMGNT1Q8WZA1 660 aa16.98■□□□□ 0.31
CTTN-212ENST00000527962 LARP4BQ92615 738 aaKnown RBP16.98■□□□□ 0.31
CTTN-212ENST00000527962 HVCN1Q96D96 273 aa16.98■□□□□ 0.31
CTTN-212ENST00000527962 FAM83CQ9BQN1 747 aa16.98■□□□□ 0.31
CTTN-212ENST00000527962 STYXL1Q9Y6J8 313 aa16.98■□□□□ 0.31
CTTN-212ENST00000527962 COL4A2P08572 1712 aa16.97■□□□□ 0.31
CTTN-212ENST00000527962 AXIN1O15169 862 aa16.97■□□□□ 0.31
CTTN-212ENST00000527962 EXTL3O43909 919 aa16.97■□□□□ 0.31
CTTN-212ENST00000527962 PRPF40AO75400 957 aaKnown RBP16.97■□□□□ 0.31
CTTN-212ENST00000527962 ZNF806P0C7X5 589 aa16.97■□□□□ 0.31
CTTN-212ENST00000527962 DRD1P21728 446 aa16.97■□□□□ 0.31
CTTN-212ENST00000527962 LIMK1P53667 647 aa16.97■□□□□ 0.31
CTTN-212ENST00000527962 NLRP12P59046 1061 aa16.97■□□□□ 0.31
CTTN-212ENST00000527962 KARSQ15046 597 aaKnown RBP16.97■□□□□ 0.31
CTTN-212ENST00000527962 SLC39A4Q6P5W5 647 aa16.97■□□□□ 0.31
CTTN-212ENST00000527962 BRAPQ7Z569 592 aa16.97■□□□□ 0.31
CTTN-212ENST00000527962 MON1AQ86VX9 555 aa16.97■□□□□ 0.31
CTTN-212ENST00000527962 SMG9Q9H0W8 520 aaKnown RBP16.97■□□□□ 0.31
CTTN-212ENST00000527962 ARRDC1-AS1Q9H2J1 176 aa16.97■□□□□ 0.31
CTTN-212ENST00000527962 EBF3Q9H4W6 596 aa16.97■□□□□ 0.31
CTTN-212ENST00000527962 BLOC1S4Q9NUP1 217 aa16.97■□□□□ 0.31
CTTN-212ENST00000527962 CCDC39Q9UFE4 941 aa16.97■□□□□ 0.31
CTTN-212ENST00000527962 SMC3Q9UQE7 1217 aa16.97■□□□□ 0.31
CTTN-212ENST00000527962 R3HCC1Q9Y3T6 440 aaKnown RBP16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms