RNA–Protein interactions for RNA: ENST00000527889.5

CD44-226, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-226ENST00000527889 SCP2P22307 547 aa4.57□□□□□ -1.68
CD44-226ENST00000527889 NOS3P29474 1203 aa4.57□□□□□ -1.68
CD44-226ENST00000527889 GATA4P43694 442 aa4.57□□□□□ -1.68
CD44-226ENST00000527889 ALDH5A1P51649 535 aaPredicted RBP4.57□□□□□ -1.68
CD44-226ENST00000527889 ERVK-21P61565 698 aa4.57□□□□□ -1.68
CD44-226ENST00000527889 AMPD2Q01433 879 aa4.57□□□□□ -1.68
CD44-226ENST00000527889 POU5F1Q01860 360 aaKnown RBP4.57□□□□□ -1.68
CD44-226ENST00000527889 CCDC173Q0VFZ6 552 aa4.57□□□□□ -1.68
CD44-226ENST00000527889 ITGB3BPQ13352 177 aaPredicted RBP4.57□□□□□ -1.68
CD44-226ENST00000527889 PPP2R5CQ13362 524 aa4.57□□□□□ -1.68
CD44-226ENST00000527889 INAVAQ3KP66 663 aa4.57□□□□□ -1.68
CD44-226ENST00000527889 HSP90AA4PQ58FG1 418 aa4.57□□□□□ -1.68
CD44-226ENST00000527889 HYIQ5T013 277 aa4.57□□□□□ -1.68
CD44-226ENST00000527889 HAUS3Q68CZ6 603 aa4.57□□□□□ -1.68
CD44-226ENST00000527889 CXorf57Q6NSI4 855 aaKnown RBP4.57□□□□□ -1.68
CD44-226ENST00000527889 ACAD11Q709F0 780 aa4.57□□□□□ -1.68
CD44-226ENST00000527889 FKBP9P1Q75LS8 142 aa4.57□□□□□ -1.68
CD44-226ENST00000527889 Q7L0L9 218 aa4.57□□□□□ -1.68
CD44-226ENST00000527889 OTOP1Q7RTM1 612 aa4.57□□□□□ -1.68
CD44-226ENST00000527889 NIPA1Q7RTP0 329 aa4.57□□□□□ -1.68
CD44-226ENST00000527889 MIER3Q7Z3K6 550 aa4.57□□□□□ -1.68
CD44-226ENST00000527889 DDX53Q86TM3 631 aaKnown RBP4.57□□□□□ -1.68
CD44-226ENST00000527889 CDH24Q86UP0 819 aa4.57□□□□□ -1.68
CD44-226ENST00000527889 VSIG10LQ86VR7 867 aa4.57□□□□□ -1.68
CD44-226ENST00000527889 GPBP1Q86WP2 473 aa4.57□□□□□ -1.68
CD44-226ENST00000527889 CATSPER3Q86XQ3 398 aa4.57□□□□□ -1.68
CD44-226ENST00000527889 TPH2Q8IWU9 490 aa4.57□□□□□ -1.68
CD44-226ENST00000527889 ANKRD13CQ8N6S4 541 aa4.57□□□□□ -1.68
CD44-226ENST00000527889 TRIML1Q8N9V2 468 aa4.57□□□□□ -1.68
CD44-226ENST00000527889 C2CD4AQ8NCU7 369 aaPredicted RBP4.57□□□□□ -1.68
CD44-226ENST00000527889 SVIPQ8NHG7 77 aa4.57□□□□□ -1.68
CD44-226ENST00000527889 ERMNQ8TAM6 284 aa4.57□□□□□ -1.68
CD44-226ENST00000527889 SPATA20Q8TB22 786 aa4.57□□□□□ -1.68
CD44-226ENST00000527889 NSUN6Q8TEA1 469 aaKnown RBP4.57□□□□□ -1.68
CD44-226ENST00000527889 SMCR8Q8TEV9 937 aaPredicted RBP4.57□□□□□ -1.68
CD44-226ENST00000527889 HPS3Q969F9 1004 aa4.57□□□□□ -1.68
CD44-226ENST00000527889 NACC1Q96RE7 527 aa4.57□□□□□ -1.68
CD44-226ENST00000527889 MMP19Q99542 508 aa4.57□□□□□ -1.68
CD44-226ENST00000527889 MIPEPQ99797 713 aa4.57□□□□□ -1.68
CD44-226ENST00000527889 PTPN18Q99952 460 aa4.57□□□□□ -1.68
CD44-226ENST00000527889 C7orf25Q9BPX7 421 aa4.57□□□□□ -1.68
CD44-226ENST00000527889 TRIM9Q9C026 710 aa4.57□□□□□ -1.68
CD44-226ENST00000527889 NAT10Q9H0A0 1025 aaKnown RBP4.57□□□□□ -1.68
CD44-226ENST00000527889 NT5C3AQ9H0P0 336 aa4.57□□□□□ -1.68
CD44-226ENST00000527889 PORCNQ9H237 461 aa4.57□□□□□ -1.68
CD44-226ENST00000527889 CUEDC2Q9H467 287 aa4.57□□□□□ -1.68
CD44-226ENST00000527889 BCAS3Q9H6U6 928 aa4.57□□□□□ -1.68
CD44-226ENST00000527889 MAGEF1Q9HAY2 307 aa4.57□□□□□ -1.68
CD44-226ENST00000527889 TCF7L1Q9HCS4 588 aa4.57□□□□□ -1.68
CD44-226ENST00000527889 LUC7LQ9NQ29 371 aaKnown RBP4.57□□□□□ -1.68
CD44-226ENST00000527889 EXOC1Q9NV70 894 aa4.57□□□□□ -1.68
CD44-226ENST00000527889 GFOD1Q9NXC2 390 aa4.57□□□□□ -1.68
CD44-226ENST00000527889 MAP3K20Q9NYL2 800 aaKnown RBP4.57□□□□□ -1.68
CD44-226ENST00000527889 FBXO40Q9UH90 709 aa4.57□□□□□ -1.68
CD44-226ENST00000527889 PCOLCE2Q9UKZ9 415 aa4.57□□□□□ -1.68
CD44-226ENST00000527889 CTNND2Q9UQB3 1225 aa4.57□□□□□ -1.68
CD44-226ENST00000527889 RABGAP1Q9Y3P9 1069 aa4.57□□□□□ -1.68
CD44-226ENST00000527889 TELO2Q9Y4R8 837 aa4.57□□□□□ -1.68
CD44-226ENST00000527889 TRANK1O15050 2925 aa4.57□□□□□ -1.68
CD44-226ENST00000527889 TMEM150BA6NC51 233 aa4.56□□□□□ -1.68
CD44-226ENST00000527889 TRIM49BA6NDI0 452 aa4.56□□□□□ -1.68
CD44-226ENST00000527889 ARVCFO00192 962 aa4.56□□□□□ -1.68
CD44-226ENST00000527889 ARNTLO00327 626 aa4.56□□□□□ -1.68
CD44-226ENST00000527889 IGF2BP3O00425 579 aaKnown RBP eCLIP4.56□□□□□ -1.68
CD44-226ENST00000527889 CA12O43570 354 aa4.56□□□□□ -1.68
CD44-226ENST00000527889 LRRN2O75325 713 aa4.56□□□□□ -1.68
CD44-226ENST00000527889 RHOBTB3O94955 611 aa4.56□□□□□ -1.68
CD44-226ENST00000527889 ALX3O95076 343 aa4.56□□□□□ -1.68
CD44-226ENST00000527889 CAVIN2O95810 425 aa4.56□□□□□ -1.68
CD44-226ENST00000527889 SLC25A27O95847 323 aa4.56□□□□□ -1.68
CD44-226ENST00000527889 CKMP06732 381 aa4.56□□□□□ -1.68
CD44-226ENST00000527889 PLA2G4BP0C869 781 aa4.56□□□□□ -1.68
CD44-226ENST00000527889 ZBTB48P10074 688 aaPredicted RBP4.56□□□□□ -1.68
CD44-226ENST00000527889 FCER1AP12319 257 aa4.56□□□□□ -1.68
CD44-226ENST00000527889 ATP1A3P13637 1013 aa4.56□□□□□ -1.68
CD44-226ENST00000527889 IDEP14735 1019 aa4.56□□□□□ -1.68
CD44-226ENST00000527889 NAT1P18440 290 aa4.56□□□□□ -1.68
CD44-226ENST00000527889 ITIH2P19823 946 aa4.56□□□□□ -1.68
CD44-226ENST00000527889 RPA1P27694 616 aa4.56□□□□□ -1.68
CD44-226ENST00000527889 ETV3P41162 512 aa4.56□□□□□ -1.68
CD44-226ENST00000527889 PRCPP42785 496 aa4.56□□□□□ -1.68
CD44-226ENST00000527889 LSSP48449 732 aa4.56□□□□□ -1.68
CD44-226ENST00000527889 ZNF75DP51815 510 aa4.56□□□□□ -1.68
CD44-226ENST00000527889 SLC12A3P55017 1021 aa4.56□□□□□ -1.68
CD44-226ENST00000527889 IL2P60568 153 aa4.56□□□□□ -1.68
CD44-226ENST00000527889 MYL5Q02045 173 aa4.56□□□□□ -1.68
CD44-226ENST00000527889 SP2Q02086 613 aa4.56□□□□□ -1.68
CD44-226ENST00000527889 SP4Q02446 784 aa4.56□□□□□ -1.68
CD44-226ENST00000527889 COASYQ13057 564 aa4.56□□□□□ -1.68
CD44-226ENST00000527889 DOC2BQ14184 412 aa4.56□□□□□ -1.68
CD44-226ENST00000527889 KCNB1Q14721 858 aa4.56□□□□□ -1.68
CD44-226ENST00000527889 BRD3Q15059 726 aa4.56□□□□□ -1.68
CD44-226ENST00000527889 UGCGQ16739 394 aa4.56□□□□□ -1.68
CD44-226ENST00000527889 PTPN21Q16825 1174 aa4.56□□□□□ -1.68
CD44-226ENST00000527889 ZNF658Q5TYW1 1059 aaPredicted RBP4.56□□□□□ -1.68
CD44-226ENST00000527889 IQSEC1Q6DN90 963 aa4.56□□□□□ -1.68
CD44-226ENST00000527889 IGF2-ASQ6U949 168 aa4.56□□□□□ -1.68
CD44-226ENST00000527889 B3GNT9Q6UX72 402 aa4.56□□□□□ -1.68
CD44-226ENST00000527889 SEPT14Q6ZU15 432 aa4.56□□□□□ -1.68
CD44-226ENST00000527889 TRMT1LQ7Z2T5 733 aaKnown RBP4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms