RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 POMCP01189 267 aa15.84■□□□□ 0.13
USP47-207ENST00000527733 ELAVL2Q12926 359 aaKnown RBP15.84■□□□□ 0.13
USP47-207ENST00000527733 STKLD1Q8NE28 680 aa15.84■□□□□ 0.13
USP47-207ENST00000527733 PLCD4Q9BRC7 762 aa15.84■□□□□ 0.13
USP47-207ENST00000527733 PAMP19021 973 aa15.83■□□□□ 0.13
USP47-207ENST00000527733 ALDH1A3P47895 512 aa15.83■□□□□ 0.13
USP47-207ENST00000527733 GSPT2Q8IYD1 628 aaKnown RBP15.83■□□□□ 0.13
USP47-207ENST00000527733 MBOAT7Q96N66 472 aa15.83■□□□□ 0.13
USP47-207ENST00000527733 CNOT10Q9H9A5 744 aaKnown RBP15.83■□□□□ 0.13
USP47-207ENST00000527733 SMYD2Q9NRG4 433 aa15.83■□□□□ 0.13
USP47-207ENST00000527733 HMGB1P1B2RPK0 211 aaPredicted RBP15.83■□□□□ 0.12
USP47-207ENST00000527733 PMLP29590 882 aa15.83■□□□□ 0.12
USP47-207ENST00000527733 NNMTP40261 264 aa15.83■□□□□ 0.12
USP47-207ENST00000527733 ZNF131P52739 623 aa15.83■□□□□ 0.12
USP47-207ENST00000527733 HIRAP54198 1017 aaPredicted RBP15.83■□□□□ 0.12
USP47-207ENST00000527733 PMS2P54278 862 aa15.83■□□□□ 0.12
USP47-207ENST00000527733 NFE2Q16621 373 aaPredicted RBP15.83■□□□□ 0.12
USP47-207ENST00000527733 SLC35G1Q2M3R5 365 aa15.83■□□□□ 0.12
USP47-207ENST00000527733 DEFB128Q7Z7B8 93 aa15.83■□□□□ 0.12
USP47-207ENST00000527733 RUBCNQ92622 972 aa15.83■□□□□ 0.12
USP47-207ENST00000527733 CAPNS2Q96L46 248 aa15.83■□□□□ 0.12
USP47-207ENST00000527733 TEPSINQ96N21 525 aa15.83■□□□□ 0.12
USP47-207ENST00000527733 ACO2Q99798 780 aaKnown RBP15.83■□□□□ 0.12
USP47-207ENST00000527733 PPP1R12CQ9BZL4 782 aa15.83■□□□□ 0.12
USP47-207ENST00000527733 CAPN6Q9Y6Q1 641 aa15.83■□□□□ 0.12
USP47-207ENST00000527733 A0A0A6YYK5 440 aaPredicted RBP15.83■□□□□ 0.12
USP47-207ENST00000527733 CFAP69A5D8W1 941 aa15.83■□□□□ 0.12
USP47-207ENST00000527733 TGFB1I1O43294 461 aa15.83■□□□□ 0.12
USP47-207ENST00000527733 CST8O60676 142 aa15.83■□□□□ 0.12
USP47-207ENST00000527733 ALDH2P05091 517 aa15.83■□□□□ 0.12
USP47-207ENST00000527733 TRIM42Q8IWZ5 723 aa15.83■□□□□ 0.12
USP47-207ENST00000527733 SKA2Q8WVK7 121 aaPredicted RBP15.83■□□□□ 0.12
USP47-207ENST00000527733 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.83■□□□□ 0.123e-6■■■■■ 50.8
USP47-207ENST00000527733 IFT43Q96FT9 208 aa15.83■□□□□ 0.12
USP47-207ENST00000527733 NUDCD1Q96RS6 583 aa15.83■□□□□ 0.12
USP47-207ENST00000527733 ZSWIM1Q9BR11 485 aa15.83■□□□□ 0.12
USP47-207ENST00000527733 CDT1Q9H211 546 aa15.83■□□□□ 0.12
USP47-207ENST00000527733 RBM12Q9NTZ6 932 aaKnown RBP15.83■□□□□ 0.12
USP47-207ENST00000527733 LSM7Q9UK45 103 aaKnown RBP15.83■□□□□ 0.12
USP47-207ENST00000527733 TTI1O43156 1089 aa15.82■□□□□ 0.12
USP47-207ENST00000527733 RAG1P15918 1043 aa15.82■□□□□ 0.12
USP47-207ENST00000527733 KPNA2P52292 529 aaKnown RBP15.82■□□□□ 0.12
USP47-207ENST00000527733 CLEC16AQ2KHT3 1053 aa15.82■□□□□ 0.12
USP47-207ENST00000527733 ARHGAP18Q8N392 663 aa15.82■□□□□ 0.12
USP47-207ENST00000527733 USP38Q8NB14 1042 aa15.82■□□□□ 0.12
USP47-207ENST00000527733 BRI3BPQ8WY22 251 aa15.82■□□□□ 0.12
USP47-207ENST00000527733 MAML3Q96JK9 1138 aa15.82■□□□□ 0.12
USP47-207ENST00000527733 CELF4Q9BZC1 486 aaKnown RBP15.82■□□□□ 0.12
USP47-207ENST00000527733 TRPV6Q9H1D0 765 aa15.82■□□□□ 0.12
USP47-207ENST00000527733 CDY2AQ9Y6F7 541 aa15.82■□□□□ 0.12
USP47-207ENST00000527733 USP54Q70EL1 1684 aa15.82■□□□□ 0.12
USP47-207ENST00000527733 ADRB2P07550 413 aa15.82■□□□□ 0.12
USP47-207ENST00000527733 NDST1P52848 882 aa15.82■□□□□ 0.12
USP47-207ENST00000527733 SMTNL2Q2TAL5 461 aa15.82■□□□□ 0.12
USP47-207ENST00000527733 VPS39Q96JC1 886 aa15.82■□□□□ 0.12
USP47-207ENST00000527733 ADAM2Q99965 735 aa15.82■□□□□ 0.12
USP47-207ENST00000527733 DFFAO00273 331 aa15.82■□□□□ 0.12
USP47-207ENST00000527733 EEF2KO00418 725 aaKnown RBP15.82■□□□□ 0.12
USP47-207ENST00000527733 C2CD2LO14523 706 aa15.82■□□□□ 0.12
USP47-207ENST00000527733 SETSIPP0DME0 302 aa15.82■□□□□ 0.12
USP47-207ENST00000527733 DLG4P78352 724 aa15.82■□□□□ 0.12
USP47-207ENST00000527733 BYSLQ13895 437 aaKnown RBP15.82■□□□□ 0.12
USP47-207ENST00000527733 CTXN3Q4LDR2 81 aa15.82■□□□□ 0.12
USP47-207ENST00000527733 RNPEPQ9H4A4 650 aa15.82■□□□□ 0.12
USP47-207ENST00000527733 TRPC7Q9HCX4 862 aa15.82■□□□□ 0.12
USP47-207ENST00000527733 KCNN4O15554 427 aa15.82■□□□□ 0.12
USP47-207ENST00000527733 GSTA1P08263 222 aa15.82■□□□□ 0.12
USP47-207ENST00000527733 HMBSP08397 361 aa15.82■□□□□ 0.12
USP47-207ENST00000527733 GSTA2P09210 222 aa15.82■□□□□ 0.12
USP47-207ENST00000527733 KCNA3P22001 575 aa15.82■□□□□ 0.12
USP47-207ENST00000527733 CA4P22748 312 aa15.82■□□□□ 0.12
USP47-207ENST00000527733 VSNL1P62760 191 aa15.82■□□□□ 0.12
USP47-207ENST00000527733 MRPS6P82932 125 aaKnown RBP15.82■□□□□ 0.12
USP47-207ENST00000527733 C1QBPQ07021 282 aaKnown RBP15.82■□□□□ 0.12
USP47-207ENST00000527733 PDIA2Q13087 525 aaKnown RBP15.82■□□□□ 0.12
USP47-207ENST00000527733 HASPINQ8TF76 798 aa15.82■□□□□ 0.12
USP47-207ENST00000527733 PPP1R13LQ8WUF5 828 aa15.82■□□□□ 0.12
USP47-207ENST00000527733 NR1D1P20393 614 aa15.81■□□□□ 0.12
USP47-207ENST00000527733 PPARGP37231 505 aaPredicted RBP15.81■□□□□ 0.12
USP47-207ENST00000527733 COG1Q8WTW3 980 aa15.81■□□□□ 0.12
USP47-207ENST00000527733 PDCD6IPQ8WUM4 868 aaKnown RBP15.81■□□□□ 0.12
USP47-207ENST00000527733 MAGEB5Q9BZ81 275 aa15.81■□□□□ 0.12
USP47-207ENST00000527733 COL1A2P08123 1366 aa15.81■□□□□ 0.12
USP47-207ENST00000527733 M0R2N6 131 aa15.81■□□□□ 0.12
USP47-207ENST00000527733 KRT38O76015 456 aa15.81■□□□□ 0.12
USP47-207ENST00000527733 MMP3P08254 477 aa15.81■□□□□ 0.12
USP47-207ENST00000527733 ZNF235Q14590 738 aa15.81■□□□□ 0.12
USP47-207ENST00000527733 MEA1Q16626 185 aa15.81■□□□□ 0.12
USP47-207ENST00000527733 KLHL38Q2WGJ6 581 aa15.81■□□□□ 0.12
USP47-207ENST00000527733 MIIPQ5JXC2 388 aa15.81■□□□□ 0.12
USP47-207ENST00000527733 TDRD10Q5VZ19 366 aaKnown RBP15.81■□□□□ 0.12
USP47-207ENST00000527733 ZNF280DQ6N043 979 aa15.81■□□□□ 0.12
USP47-207ENST00000527733 GAD1Q99259 594 aa15.81■□□□□ 0.12
USP47-207ENST00000527733 TMEM39AQ9NV64 488 aa15.81■□□□□ 0.12
USP47-207ENST00000527733 DDIT4Q9NX09 232 aa15.81■□□□□ 0.12
USP47-207ENST00000527733 SMARCAL1Q9NZC9 954 aa15.81■□□□□ 0.12
USP47-207ENST00000527733 PSTPIP1O43586 416 aa15.81■□□□□ 0.12
USP47-207ENST00000527733 RBP3P10745 1247 aa15.81■□□□□ 0.12
USP47-207ENST00000527733 OVOS1Q6IE37 1185 aa15.81■□□□□ 0.12
USP47-207ENST00000527733 C12orf56Q8IXR9 622 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms