RNA–Protein interactions for RNA: ENST00000527299.1

CLNS1A-209, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 387 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-209ENST00000527299 CISD2Q8N5K1 135 aaKnown RBP4.05□□□□□ -1.76
CLNS1A-209ENST00000527299 TEX9Q8N6V9 391 aa4.05□□□□□ -1.76
CLNS1A-209ENST00000527299 OR5AN1Q8NGI8 311 aa4.05□□□□□ -1.76
CLNS1A-209ENST00000527299 CCHCR1Q8TD31 782 aa4.05□□□□□ -1.76
CLNS1A-209ENST00000527299 CTNNBL1Q8WYA6 563 aaPredicted RBP4.05□□□□□ -1.76
CLNS1A-209ENST00000527299 GCC1Q96CN9 775 aa4.05□□□□□ -1.76
CLNS1A-209ENST00000527299 HVCN1Q96D96 273 aa4.05□□□□□ -1.76
CLNS1A-209ENST00000527299 MYEOVQ96EZ4 313 aa4.05□□□□□ -1.76
CLNS1A-209ENST00000527299 TCHPQ9BT92 498 aa4.05□□□□□ -1.76
CLNS1A-209ENST00000527299 SPATA9Q9BWV2 254 aa4.05□□□□□ -1.76
CLNS1A-209ENST00000527299 MOV10L1Q9BXT6 1211 aaKnown RBP4.05□□□□□ -1.76
CLNS1A-209ENST00000527299 YIPF3Q9GZM5 350 aa4.05□□□□□ -1.76
CLNS1A-209ENST00000527299 DHX36Q9H2U1 1008 aaKnown RBP4.05□□□□□ -1.76
CLNS1A-209ENST00000527299 VCPKMTQ9H867 229 aa4.05□□□□□ -1.76
CLNS1A-209ENST00000527299 ACTR5Q9H9F9 607 aaPredicted RBP4.05□□□□□ -1.76
CLNS1A-209ENST00000527299 EBF2Q9HAK2 575 aa4.05□□□□□ -1.76
CLNS1A-209ENST00000527299 HELLSQ9NRZ9 838 aa4.05□□□□□ -1.76
CLNS1A-209ENST00000527299 SYBUQ9NX95 663 aa4.05□□□□□ -1.76
CLNS1A-209ENST00000527299 PCSK1NQ9UHG2 260 aa4.05□□□□□ -1.76
CLNS1A-209ENST00000527299 HOOK1Q9UJC3 728 aaKnown RBP4.05□□□□□ -1.76
CLNS1A-209ENST00000527299 SSX2IPQ9Y2D8 614 aa4.05□□□□□ -1.76
CLNS1A-209ENST00000527299 CARD8Q9Y2G2 431 aa4.05□□□□□ -1.76
CLNS1A-209ENST00000527299 DAAM1Q9Y4D1 1078 aa4.05□□□□□ -1.76
CLNS1A-209ENST00000527299 PTPN23Q9H3S7 1636 aa4.05□□□□□ -1.76
CLNS1A-209ENST00000527299 TIAM1Q13009 1591 aa4.05□□□□□ -1.76
CLNS1A-209ENST00000527299 CFAP74Q9C0B2 1584 aa4.05□□□□□ -1.76
CLNS1A-209ENST00000527299 TCHHQ07283 1943 aa4.05□□□□□ -1.76
CLNS1A-209ENST00000527299 LRRC9Q6ZRR7 1453 aa4.05□□□□□ -1.76
CLNS1A-209ENST00000527299 ERBINQ96RT1 1412 aa4.04□□□□□ -1.76
CLNS1A-209ENST00000527299 PARD3Q8TEW0 1356 aa4.04□□□□□ -1.76
CLNS1A-209ENST00000527299 ABCC11Q96J66 1382 aa4.04□□□□□ -1.76
CLNS1A-209ENST00000527299 SPATA31A6Q5VVP1 1343 aa4.04□□□□□ -1.76
CLNS1A-209ENST00000527299 ZNF521Q96K83 1311 aa4.04□□□□□ -1.76
CLNS1A-209ENST00000527299 GPR75-ASB3A0A0A6YYF3 556 aa4.04□□□□□ -1.76
CLNS1A-209ENST00000527299 GOLGA6L10A0A0M3HER8 536 aa4.04□□□□□ -1.76
CLNS1A-209ENST00000527299 GOLGA6L7A0A1B0GV03 622 aa4.04□□□□□ -1.76
CLNS1A-209ENST00000527299 FRMD3A2A2Y4 597 aa4.04□□□□□ -1.76
CLNS1A-209ENST00000527299 CCDC162PA2VCL2 907 aa4.04□□□□□ -1.76
CLNS1A-209ENST00000527299 WDR46O15213 610 aaKnown RBP4.04□□□□□ -1.76
CLNS1A-209ENST00000527299 BIRC5O15392 142 aa4.04□□□□□ -1.76
CLNS1A-209ENST00000527299 AP5Z1O43299 807 aa4.04□□□□□ -1.76
CLNS1A-209ENST00000527299 MGEA5O60502 916 aa4.04□□□□□ -1.76
CLNS1A-209ENST00000527299 TBCAO75347 108 aaKnown RBP4.04□□□□□ -1.76
CLNS1A-209ENST00000527299 RECQL4O94761 1208 aa4.04□□□□□ -1.76
CLNS1A-209ENST00000527299 SCAF4O95104 1147 aaKnown RBP4.04□□□□□ -1.76
CLNS1A-209ENST00000527299 RASGRP1O95267 797 aa4.04□□□□□ -1.76
CLNS1A-209ENST00000527299 CRTAMO95727 393 aa4.04□□□□□ -1.76
CLNS1A-209ENST00000527299 LINGO3P0C6S8 592 aa4.04□□□□□ -1.76
CLNS1A-209ENST00000527299 TYRP1P17643 537 aa4.04□□□□□ -1.76
CLNS1A-209ENST00000527299 IL4RP24394 825 aa4.04□□□□□ -1.76
CLNS1A-209ENST00000527299 CCNCP24863 283 aa4.04□□□□□ -1.76
CLNS1A-209ENST00000527299 S100A5P33763 92 aa4.04□□□□□ -1.76
CLNS1A-209ENST00000527299 HOXD12P35452 270 aa4.04□□□□□ -1.76
CLNS1A-209ENST00000527299 CCT6AP40227 531 aaKnown RBP4.04□□□□□ -1.76
CLNS1A-209ENST00000527299 MATR3P43243 847 aaKnown RBP eCLIP4.04□□□□□ -1.76
CLNS1A-209ENST00000527299 CLK1P49759 484 aaKnown RBP4.04□□□□□ -1.76
CLNS1A-209ENST00000527299 CLCN2P51788 898 aa4.04□□□□□ -1.76
CLNS1A-209ENST00000527299 USP14P54578 494 aa4.04□□□□□ -1.76
CLNS1A-209ENST00000527299 SUMO1P63165 101 aaKnown RBP4.04□□□□□ -1.76
CLNS1A-209ENST00000527299 TUBA1BP68363 451 aa4.04□□□□□ -1.76
CLNS1A-209ENST00000527299 GABREP78334 506 aa4.04□□□□□ -1.76
CLNS1A-209ENST00000527299 ACTN3Q08043 901 aaPredicted RBP4.04□□□□□ -1.76
CLNS1A-209ENST00000527299 PPIDQ08752 370 aaKnown RBP4.04□□□□□ -1.76
CLNS1A-209ENST00000527299 WASHC5Q12768 1159 aa4.04□□□□□ -1.76
CLNS1A-209ENST00000527299 SPIDRQ14159 915 aa4.04□□□□□ -1.76
CLNS1A-209ENST00000527299 TMEM132BQ14DG7 1078 aa4.04□□□□□ -1.76
CLNS1A-209ENST00000527299 ALDH1L2Q3SY69 923 aa4.04□□□□□ -1.76
CLNS1A-209ENST00000527299 CCDC40Q4G0X9 1142 aa4.04□□□□□ -1.76
CLNS1A-209ENST00000527299 BOLA3Q53S33 107 aa4.04□□□□□ -1.76
CLNS1A-209ENST00000527299 CCDC122Q5T0U0 273 aa4.04□□□□□ -1.76
CLNS1A-209ENST00000527299 GALNT17Q6IS24 598 aa4.04□□□□□ -1.76
CLNS1A-209ENST00000527299 CRELD2Q6UXH1 353 aaPredicted RBP4.04□□□□□ -1.76
CLNS1A-209ENST00000527299 ANKS3Q6ZW76 656 aa4.04□□□□□ -1.76
CLNS1A-209ENST00000527299 TUBA1AQ71U36 451 aa4.04□□□□□ -1.76
CLNS1A-209ENST00000527299 PCGF5Q86SE9 256 aa4.04□□□□□ -1.76
CLNS1A-209ENST00000527299 LUZP1Q86V48 1076 aa4.04□□□□□ -1.76
CLNS1A-209ENST00000527299 HOOK3Q86VS8 718 aa4.04□□□□□ -1.76
CLNS1A-209ENST00000527299 SESTD1Q86VW0 696 aa4.04□□□□□ -1.76
CLNS1A-209ENST00000527299 PLA2G4DQ86XP0 818 aa4.04□□□□□ -1.76
CLNS1A-209ENST00000527299 SAMD14Q8IZD0 417 aaPredicted RBP4.04□□□□□ -1.76
CLNS1A-209ENST00000527299 ACMSDQ8TDX5 336 aa4.04□□□□□ -1.76
CLNS1A-209ENST00000527299 AFAP1L1Q8TED9 768 aa4.04□□□□□ -1.76
CLNS1A-209ENST00000527299 LEO1Q8WVC0 666 aaPredicted RBP4.04□□□□□ -1.76
CLNS1A-209ENST00000527299 MAIP1Q8WWC4 291 aa4.04□□□□□ -1.76
CLNS1A-209ENST00000527299 ARL8AQ96BM9 186 aa4.04□□□□□ -1.76
CLNS1A-209ENST00000527299 CENPTQ96BT3 561 aa4.04□□□□□ -1.76
CLNS1A-209ENST00000527299 ZNF653Q96CK0 615 aa4.04□□□□□ -1.76
CLNS1A-209ENST00000527299 VMP1Q96GC9 406 aa4.04□□□□□ -1.76
CLNS1A-209ENST00000527299 SNX27Q96L92 541 aa4.04□□□□□ -1.76
CLNS1A-209ENST00000527299 ZMAT2Q96NC0 199 aaKnown RBP4.04□□□□□ -1.76
CLNS1A-209ENST00000527299 CGREF1Q99674 301 aa4.04□□□□□ -1.76
CLNS1A-209ENST00000527299 EIF2AQ9BY44 585 aaKnown RBP4.04□□□□□ -1.76
CLNS1A-209ENST00000527299 NACAP1Q9BZK3 213 aa4.04□□□□□ -1.76
CLNS1A-209ENST00000527299 TAOK3Q9H2K8 898 aa4.04□□□□□ -1.76
CLNS1A-209ENST00000527299 SERHL2Q9H4I8 314 aa4.04□□□□□ -1.76
CLNS1A-209ENST00000527299 ZNF768Q9H5H4 540 aaKnown RBP4.04□□□□□ -1.76
CLNS1A-209ENST00000527299 BICC1Q9H694 974 aaKnown RBP4.04□□□□□ -1.76
CLNS1A-209ENST00000527299 VIPAS39Q9H9C1 493 aa4.04□□□□□ -1.76
CLNS1A-209ENST00000527299 DDX21Q9NR30 783 aaKnown RBP eCLIP4.04□□□□□ -1.76
CLNS1A-209ENST00000527299 KIAA1522Q9P206 1035 aaPredicted RBP4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms