RNA–Protein interactions for RNA: ENST00000526877.1

SSSCA1-203, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-203ENST00000526877 ITIH3Q06033 890 aa13.59□□□□□ -0.23
SSSCA1-203ENST00000526877 RAPGEF1Q13905 1077 aa13.59□□□□□ -0.23
SSSCA1-203ENST00000526877 SGSM1Q2NKQ1 1148 aa13.59□□□□□ -0.23
SSSCA1-203ENST00000526877 XKR4Q5GH76 650 aa13.59□□□□□ -0.23
SSSCA1-203ENST00000526877 PHLDB3Q6NSJ2 640 aa13.59□□□□□ -0.23
SSSCA1-203ENST00000526877 PDXDC1Q6P996 788 aa13.59□□□□□ -0.23
SSSCA1-203ENST00000526877 RABGGTAQ92696 567 aa13.59□□□□□ -0.23
SSSCA1-203ENST00000526877 RPGRIP1Q96KN7 1286 aa13.59□□□□□ -0.23
SSSCA1-203ENST00000526877 PAAF1Q9BRP4 392 aa13.59□□□□□ -0.23
SSSCA1-203ENST00000526877 NAA15Q9BXJ9 866 aaKnown RBP13.59□□□□□ -0.23
SSSCA1-203ENST00000526877 STK33Q9BYT3 514 aa13.59□□□□□ -0.23
SSSCA1-203ENST00000526877 RXFP1Q9HBX9 757 aa13.59□□□□□ -0.23
SSSCA1-203ENST00000526877 UBE2TQ9NPD8 197 aaPredicted RBP13.59□□□□□ -0.23
SSSCA1-203ENST00000526877 DPP3Q9NY33 737 aa13.59□□□□□ -0.23
SSSCA1-203ENST00000526877 CACNG4Q9UBN1 327 aa13.59□□□□□ -0.23
SSSCA1-203ENST00000526877 ITGA11Q9UKX5 1188 aa13.59□□□□□ -0.23
SSSCA1-203ENST00000526877 UBQLN1Q9UMX0 589 aaKnown RBP13.59□□□□□ -0.23
SSSCA1-203ENST00000526877 FHOD1Q9Y613 1164 aa13.59□□□□□ -0.23
SSSCA1-203ENST00000526877 PLXNA3P51805 1871 aa13.59□□□□□ -0.23
SSSCA1-203ENST00000526877 MTCL1Q9Y4B5 1905 aaKnown RBP13.58□□□□□ -0.23
SSSCA1-203ENST00000526877 SMIM28A0A1B0GU29 152 aa13.58□□□□□ -0.24
SSSCA1-203ENST00000526877 PRR33A8MZF0 331 aa13.58□□□□□ -0.24
SSSCA1-203ENST00000526877 RNF225M0QZC1 329 aaPredicted RBP13.58□□□□□ -0.24
SSSCA1-203ENST00000526877 CST3P01034 146 aaPredicted RBP13.58□□□□□ -0.24
SSSCA1-203ENST00000526877 KLRC2P26717 231 aa13.58□□□□□ -0.24
SSSCA1-203ENST00000526877 ATICP31939 592 aa13.58□□□□□ -0.24
SSSCA1-203ENST00000526877 STAT1P42224 750 aa13.58□□□□□ -0.24
SSSCA1-203ENST00000526877 RBP5P82980 135 aa13.58□□□□□ -0.24
SSSCA1-203ENST00000526877 APBA1Q02410 837 aa13.58□□□□□ -0.24
SSSCA1-203ENST00000526877 DSG1Q02413 1049 aa13.58□□□□□ -0.24
SSSCA1-203ENST00000526877 TUSC3Q13454 348 aa13.58□□□□□ -0.24
SSSCA1-203ENST00000526877 ZBTB6Q15916 424 aa13.58□□□□□ -0.24
SSSCA1-203ENST00000526877 SFMBT2Q5VUG0 894 aa13.58□□□□□ -0.24
SSSCA1-203ENST00000526877 IQCEQ6IPM2 695 aa13.58□□□□□ -0.24
SSSCA1-203ENST00000526877 GJB7Q6PEY0 223 aa13.58□□□□□ -0.24
SSSCA1-203ENST00000526877 ENOSF1Q7L5Y1 443 aa13.58□□□□□ -0.24
SSSCA1-203ENST00000526877 GPR65Q8IYL9 337 aa13.58□□□□□ -0.24
SSSCA1-203ENST00000526877 PPM1KQ8N3J5 372 aa13.58□□□□□ -0.24
SSSCA1-203ENST00000526877 BAP1Q92560 729 aa13.58□□□□□ -0.24
SSSCA1-203ENST00000526877 TAF4BQ92750 862 aa13.58□□□□□ -0.24
SSSCA1-203ENST00000526877 SYN2Q92777 582 aaPredicted RBP13.58□□□□□ -0.24
SSSCA1-203ENST00000526877 FAM84AQ96KN4 292 aa13.58□□□□□ -0.24
SSSCA1-203ENST00000526877 ZNF830Q96NB3 372 aaPredicted RBP13.58□□□□□ -0.24
SSSCA1-203ENST00000526877 DNAJC7Q99615 494 aa13.58□□□□□ -0.24
SSSCA1-203ENST00000526877 BAG1Q99933 345 aaPredicted RBP13.58□□□□□ -0.24
SSSCA1-203ENST00000526877 PI4K2AQ9BTU6 479 aa13.58□□□□□ -0.24
SSSCA1-203ENST00000526877 EMILIN2Q9BXX0 1053 aa13.58□□□□□ -0.24
SSSCA1-203ENST00000526877 POMKQ9H5K3 350 aa13.58□□□□□ -0.24
SSSCA1-203ENST00000526877 SLC38A7Q9NVC3 462 aa13.58□□□□□ -0.24
SSSCA1-203ENST00000526877 DZANK1Q9NVP4 752 aa13.58□□□□□ -0.24
SSSCA1-203ENST00000526877 ADAM28Q9UKQ2 775 aa13.58□□□□□ -0.24
SSSCA1-203ENST00000526877 LRRC53A6NM62 1247 aa13.57□□□□□ -0.24
SSSCA1-203ENST00000526877 C2CD2LO14523 706 aa13.57□□□□□ -0.24
SSSCA1-203ENST00000526877 TEX28O15482 410 aa13.57□□□□□ -0.24
SSSCA1-203ENST00000526877 ITGB3P05106 788 aa13.57□□□□□ -0.24
SSSCA1-203ENST00000526877 THP07101 528 aa13.57□□□□□ -0.24
SSSCA1-203ENST00000526877 WEE2P0C1S8 567 aa13.57□□□□□ -0.24
SSSCA1-203ENST00000526877 CCDC172P0C7W6 258 aa13.57□□□□□ -0.24
SSSCA1-203ENST00000526877 CYP3A5P20815 502 aa13.57□□□□□ -0.24
SSSCA1-203ENST00000526877 TBXAS1P24557 533 aaPredicted RBP13.57□□□□□ -0.24
SSSCA1-203ENST00000526877 GLUD2P49448 558 aa13.57□□□□□ -0.24
SSSCA1-203ENST00000526877 MYL6P60660 151 aa13.57□□□□□ -0.24
SSSCA1-203ENST00000526877 GCNT1Q02742 428 aa13.57□□□□□ -0.24
SSSCA1-203ENST00000526877 DRAP1Q14919 205 aaPredicted RBP13.57□□□□□ -0.24
SSSCA1-203ENST00000526877 ARHGAP44Q17R89 818 aa13.57□□□□□ -0.24
SSSCA1-203ENST00000526877 ZNF699Q32M78 642 aa13.57□□□□□ -0.24
SSSCA1-203ENST00000526877 GLRA4Q5JXX5 417 aa13.57□□□□□ -0.24
SSSCA1-203ENST00000526877 RARS2Q5T160 578 aaKnown RBP13.57□□□□□ -0.24
SSSCA1-203ENST00000526877 CES5AQ6NT32 575 aa13.57□□□□□ -0.24
SSSCA1-203ENST00000526877 FUT10Q6P4F1 479 aa13.57□□□□□ -0.24
SSSCA1-203ENST00000526877 CYP26C1Q6V0L0 522 aa13.57□□□□□ -0.24
SSSCA1-203ENST00000526877 TMTC1Q8IUR5 882 aa13.57□□□□□ -0.24
SSSCA1-203ENST00000526877 ARHGEF19Q8IW93 802 aa13.57□□□□□ -0.24
SSSCA1-203ENST00000526877 C1orf127Q8N9H9 656 aa13.57□□□□□ -0.24
SSSCA1-203ENST00000526877 EDAQ92838 391 aa13.57□□□□□ -0.24
SSSCA1-203ENST00000526877 TATDN2Q93075 761 aa13.57□□□□□ -0.24
SSSCA1-203ENST00000526877 B3GALT6Q96L58 329 aa13.57□□□□□ -0.24
SSSCA1-203ENST00000526877 ZMAT2Q96NC0 199 aaKnown RBP13.57□□□□□ -0.24
SSSCA1-203ENST00000526877 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.57□□□□□ -0.242e-6■■■■■ 149.1
SSSCA1-203ENST00000526877 AGAP1Q9UPQ3 857 aa13.57□□□□□ -0.24
SSSCA1-203ENST00000526877 SSX2IPQ9Y2D8 614 aa13.57□□□□□ -0.24
SSSCA1-203ENST00000526877 C2orf16Q68DN1 1984 aa13.57□□□□□ -0.24
SSSCA1-203ENST00000526877 LRRN2O75325 713 aa13.56□□□□□ -0.24
SSSCA1-203ENST00000526877 ASS1P00966 412 aaKnown RBP13.56□□□□□ -0.24
SSSCA1-203ENST00000526877 URODP06132 367 aa13.56□□□□□ -0.24
SSSCA1-203ENST00000526877 SKILP12757 684 aa13.56□□□□□ -0.24
SSSCA1-203ENST00000526877 P4HA1P13674 534 aa13.56□□□□□ -0.24
SSSCA1-203ENST00000526877 FERP16591 822 aa13.56□□□□□ -0.24
SSSCA1-203ENST00000526877 IGFBP6P24592 240 aaPredicted RBP13.56□□□□□ -0.24
SSSCA1-203ENST00000526877 POLR2BP30876 1174 aaKnown RBP13.56□□□□□ -0.24
SSSCA1-203ENST00000526877 HNRNPH3P31942 346 aaKnown RBP13.56□□□□□ -0.24
SSSCA1-203ENST00000526877 MTHFRP42898 656 aa13.56□□□□□ -0.24
SSSCA1-203ENST00000526877 JAM2P57087 298 aa13.56□□□□□ -0.24
SSSCA1-203ENST00000526877 NOP14P78316 857 aaKnown RBP13.56□□□□□ -0.24
SSSCA1-203ENST00000526877 MYO1EQ12965 1108 aa13.56□□□□□ -0.24
SSSCA1-203ENST00000526877 ASIC2Q16515 512 aa13.56□□□□□ -0.24
SSSCA1-203ENST00000526877 ZNF667Q5HYK9 610 aa13.56□□□□□ -0.24
SSSCA1-203ENST00000526877 KIAA1841Q6NSI8 718 aa13.56□□□□□ -0.24
SSSCA1-203ENST00000526877 CD300LGQ6UXG3 332 aa13.56□□□□□ -0.24
SSSCA1-203ENST00000526877 JAKMIP2Q96AA8 810 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms