RNA–Protein interactions for RNA: ENST00000526425.1

USP35-201, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best) BASIC

Gene USP35, Length 3,770 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-201ENST00000526425 ANKRD42Q8N9B4 389 aa10.4□□□□□ -0.74
USP35-201ENST00000526425 WDR60Q8WVS4 1066 aa10.4□□□□□ -0.74
USP35-201ENST00000526425 NLRP7Q8WX94 980 aa10.4□□□□□ -0.74
USP35-201ENST00000526425 SEPT1Q8WYJ6 367 aa10.4□□□□□ -0.74
USP35-201ENST00000526425 ABHD8Q96I13 439 aa10.4□□□□□ -0.74
USP35-201ENST00000526425 MLXIPLQ9NP71 852 aa10.4□□□□□ -0.74
USP35-201ENST00000526425 ZNF148Q9UQR1 794 aa10.4□□□□□ -0.74
USP35-201ENST00000526425 EIF3FO00303 357 aaPredicted RBP10.4□□□□□ -0.74
USP35-201ENST00000526425 IGF2BP3O00425 579 aaKnown RBP eCLIP10.4□□□□□ -0.74
USP35-201ENST00000526425 SPTLC1O15269 473 aa10.4□□□□□ -0.74
USP35-201ENST00000526425 TNNC2P02585 160 aa10.4□□□□□ -0.74
USP35-201ENST00000526425 MUTP22033 750 aa10.4□□□□□ -0.74
USP35-201ENST00000526425 FGFR4P22455 802 aa10.4□□□□□ -0.74
USP35-201ENST00000526425 RRM1P23921 792 aa10.4□□□□□ -0.74
USP35-201ENST00000526425 SP2Q02086 613 aa10.4□□□□□ -0.74
USP35-201ENST00000526425 NCOA4Q13772 614 aa10.4□□□□□ -0.74
USP35-201ENST00000526425 PPP1R2P3Q6NXS1 205 aa10.4□□□□□ -0.74
USP35-201ENST00000526425 SCYL2Q6P3W7 929 aa10.4□□□□□ -0.74
USP35-201ENST00000526425 CCDC137Q6PK04 289 aaKnown RBP10.4□□□□□ -0.74
USP35-201ENST00000526425 KREMEN1Q96MU8 473 aa10.4□□□□□ -0.74
USP35-201ENST00000526425 MTMR12Q9C0I1 747 aa10.4□□□□□ -0.74
USP35-201ENST00000526425 ZWILCHQ9H900 591 aa10.4□□□□□ -0.74
USP35-201ENST00000526425 ATXN10Q9UBB4 475 aa10.4□□□□□ -0.74
USP35-201ENST00000526425 H0YCG3 227 aa10.4□□□□□ -0.75
USP35-201ENST00000526425 STAM2O75886 525 aa10.4□□□□□ -0.75
USP35-201ENST00000526425 CETPP11597 493 aa10.4□□□□□ -0.75
USP35-201ENST00000526425 UBA1P22314 1058 aaKnown RBP10.4□□□□□ -0.75
USP35-201ENST00000526425 ADSSP30520 456 aa10.4□□□□□ -0.75
USP35-201ENST00000526425 ZNF131P52739 623 aa10.4□□□□□ -0.75
USP35-201ENST00000526425 RNASELQ05823 741 aaKnown RBP10.4□□□□□ -0.75
USP35-201ENST00000526425 SYCP2LQ5T4T6 812 aa10.4□□□□□ -0.75
USP35-201ENST00000526425 RIOX2Q8IUF8 465 aa10.4□□□□□ -0.75
USP35-201ENST00000526425 IQCF2Q8IXL9 164 aa10.4□□□□□ -0.75
USP35-201ENST00000526425 CCDC197Q8NCU1 140 aa10.4□□□□□ -0.75
USP35-201ENST00000526425 MDM1Q8TC05 714 aa10.4□□□□□ -0.75
USP35-201ENST00000526425 OSBPL10Q9BXB5 764 aa10.4□□□□□ -0.75
USP35-201ENST00000526425 SUCLA2Q9P2R7 463 aaPredicted RBP10.4□□□□□ -0.75
USP35-201ENST00000526425 BARX2Q9UMQ3 279 aaPredicted RBP10.4□□□□□ -0.75
USP35-201ENST00000526425 UBE4BO95155 1302 aa10.39□□□□□ -0.75
USP35-201ENST00000526425 GTPBP10A4D1E9 387 aaKnown RBP10.39□□□□□ -0.75
USP35-201ENST00000526425 PRKCBP05771 671 aa10.39□□□□□ -0.75
USP35-201ENST00000526425 NOP14P78316 857 aaKnown RBP10.39□□□□□ -0.75
USP35-201ENST00000526425 MCL1Q07820 350 aa10.39□□□□□ -0.75
USP35-201ENST00000526425 SLMAPQ14BN4 828 aa10.39□□□□□ -0.75
USP35-201ENST00000526425 SMUG1Q53HV7 270 aa10.39□□□□□ -0.75
USP35-201ENST00000526425 SH3D19Q5HYK7 790 aa10.39□□□□□ -0.75
USP35-201ENST00000526425 ISLR2Q6UXK2 745 aa10.39□□□□□ -0.75
USP35-201ENST00000526425 NCCRP1Q6ZVX7 275 aaPredicted RBP10.39□□□□□ -0.75
USP35-201ENST00000526425 APBB1IPQ7Z5R6 666 aaPredicted RBP10.39□□□□□ -0.75
USP35-201ENST00000526425 DNERQ8NFT8 737 aa10.39□□□□□ -0.75
USP35-201ENST00000526425 EPS8L1Q8TE68 723 aa10.39□□□□□ -0.75
USP35-201ENST00000526425 NMD3Q96D46 503 aaKnown RBP10.39□□□□□ -0.75
USP35-201ENST00000526425 L3MBTL3Q96JM7 780 aaPredicted RBP10.39□□□□□ -0.75
USP35-201ENST00000526425 INPP4AQ96PE3 977 aaPredicted RBP10.39□□□□□ -0.75
USP35-201ENST00000526425 PCDHB18PQ96TA0 734 aa10.39□□□□□ -0.75
USP35-201ENST00000526425 SLC5A4Q9NY91 659 aa10.39□□□□□ -0.75
USP35-201ENST00000526425 SAMD15Q9P1V8 674 aa10.39□□□□□ -0.75
USP35-201ENST00000526425 BTBD7Q9P203 1132 aa10.39□□□□□ -0.75
USP35-201ENST00000526425 PCSK1NQ9UHG2 260 aa10.39□□□□□ -0.75
USP35-201ENST00000526425 ADGRA3Q8IWK6 1321 aa10.39□□□□□ -0.75
USP35-201ENST00000526425 CCDC188H7C350 402 aa10.39□□□□□ -0.75
USP35-201ENST00000526425 PRLRP16471 622 aa10.39□□□□□ -0.75
USP35-201ENST00000526425 ALDH5A1P51649 535 aaPredicted RBP10.39□□□□□ -0.75
USP35-201ENST00000526425 HUNKP57058 714 aa10.39□□□□□ -0.75
USP35-201ENST00000526425 GTF2BQ00403 316 aa10.39□□□□□ -0.75
USP35-201ENST00000526425 UAP1Q16222 522 aaPredicted RBP10.39□□□□□ -0.75
USP35-201ENST00000526425 CDO1Q16878 200 aa10.39□□□□□ -0.75
USP35-201ENST00000526425 GLE1Q53GS7 698 aaKnown RBP10.39□□□□□ -0.75
USP35-201ENST00000526425 CYP4A22Q5TCH4 519 aa10.39□□□□□ -0.75
USP35-201ENST00000526425 C7orf31Q8N865 590 aa10.39□□□□□ -0.75
USP35-201ENST00000526425 RBBP8NLQ8NC74 664 aaPredicted RBP10.39□□□□□ -0.75
USP35-201ENST00000526425 ALG3Q92685 438 aa10.39□□□□□ -0.75
USP35-201ENST00000526425 DNAJC1Q96KC8 554 aaKnown RBP10.39□□□□□ -0.75
USP35-201ENST00000526425 SRPK1Q96SB4 655 aaKnown RBP10.39□□□□□ -0.75
USP35-201ENST00000526425 TMEM98Q9Y2Y6 226 aa10.39□□□□□ -0.75
USP35-201ENST00000526425 BOLA2-SMG1P6H3BVE0 249 aa10.39□□□□□ -0.75
USP35-201ENST00000526425 TLR3O15455 904 aaKnown RBP10.39□□□□□ -0.75
USP35-201ENST00000526425 MAGEB3O15480 346 aa10.39□□□□□ -0.75
USP35-201ENST00000526425 MGRN1O60291 552 aa10.39□□□□□ -0.75
USP35-201ENST00000526425 SERPINB3P29508 390 aa10.39□□□□□ -0.75
USP35-201ENST00000526425 TNFSF9P41273 254 aa10.39□□□□□ -0.75
USP35-201ENST00000526425 PRKCIP41743 596 aa10.39□□□□□ -0.75
USP35-201ENST00000526425 ITGA7Q13683 1181 aa10.39□□□□□ -0.75
USP35-201ENST00000526425 WDR72Q3MJ13 1102 aa10.39□□□□□ -0.75
USP35-201ENST00000526425 FAM182AQ5T1J6 154 aa10.39□□□□□ -0.75
USP35-201ENST00000526425 FAAH2Q6GMR7 532 aa10.39□□□□□ -0.75
USP35-201ENST00000526425 DRC3Q9H069 523 aa10.39□□□□□ -0.75
USP35-201ENST00000526425 ETNK2Q9NVF9 386 aa10.39□□□□□ -0.75
USP35-201ENST00000526425 COG5Q9UP83 839 aa10.39□□□□□ -0.75
USP35-201ENST00000526425 SYNJ2BP-COX16A0A087WUM0 186 aa10.38□□□□□ -0.75
USP35-201ENST00000526425 A0A0G2JLL6 359 aaPredicted RBP10.38□□□□□ -0.75
USP35-201ENST00000526425 RGS16O15492 202 aaPredicted RBP10.38□□□□□ -0.75
USP35-201ENST00000526425 KCNA2P16389 499 aa10.38□□□□□ -0.75
USP35-201ENST00000526425 GBP1P32455 592 aa10.38□□□□□ -0.75
USP35-201ENST00000526425 ZNF699Q32M78 642 aa10.38□□□□□ -0.75
USP35-201ENST00000526425 DNAJC24Q6P3W2 148 aa10.38□□□□□ -0.75
USP35-201ENST00000526425 PRRT2Q7Z6L0 340 aaPredicted RBP10.38□□□□□ -0.75
USP35-201ENST00000526425 MAP4K3Q8IVH8 894 aa10.38□□□□□ -0.75
USP35-201ENST00000526425 ARFGAP2Q8N6H7 521 aa10.38□□□□□ -0.75
USP35-201ENST00000526425 SMC1BQ8NDV3 1235 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms