RNA–Protein interactions for RNA: ENST00000525435.1

CCS-202, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 798 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-202ENST00000525435 ZNF18P17022 549 aa13.23□□□□□ -0.29
CCS-202ENST00000525435 TRIM21P19474 475 aaKnown RBP13.23□□□□□ -0.29
CCS-202ENST00000525435 KCNA5P22460 613 aa13.23□□□□□ -0.29
CCS-202ENST00000525435 TBXAS1P24557 533 aaPredicted RBP13.23□□□□□ -0.29
CCS-202ENST00000525435 ASPAP45381 313 aa13.23□□□□□ -0.29
CCS-202ENST00000525435 TUFMP49411 452 aaKnown RBP13.23□□□□□ -0.29
CCS-202ENST00000525435 MRPS5P82675 430 aaKnown RBP13.23□□□□□ -0.29
CCS-202ENST00000525435 DLX2Q07687 328 aaPredicted RBP13.23□□□□□ -0.29
CCS-202ENST00000525435 LIN9Q5TKA1 542 aa13.23□□□□□ -0.29
CCS-202ENST00000525435 LLGL2Q6P1M3 1020 aa13.23□□□□□ -0.29
CCS-202ENST00000525435 SYCE2Q6PIF2 218 aa13.23□□□□□ -0.29
CCS-202ENST00000525435 EP400NLQ6ZTU2 488 aa13.23□□□□□ -0.29
CCS-202ENST00000525435 CRYBG2Q8N1P7 616 aa13.23□□□□□ -0.29
CCS-202ENST00000525435 SMRP1Q8NCR6 262 aa13.23□□□□□ -0.29
CCS-202ENST00000525435 OR6B3Q8NGW1 331 aa13.23□□□□□ -0.29
CCS-202ENST00000525435 OR10T2Q8NGX3 314 aa13.23□□□□□ -0.29
CCS-202ENST00000525435 JAKMIP2Q96AA8 810 aa13.23□□□□□ -0.29
CCS-202ENST00000525435 TNIP3Q96KP6 325 aa13.23□□□□□ -0.29
CCS-202ENST00000525435 PI4K2AQ9BTU6 479 aa13.23□□□□□ -0.29
CCS-202ENST00000525435 S1PR5Q9H228 398 aa13.23□□□□□ -0.29
CCS-202ENST00000525435 ADAM7Q9H2U9 754 aa13.23□□□□□ -0.29
CCS-202ENST00000525435 NDST4Q9H3R1 872 aa13.23□□□□□ -0.29
CCS-202ENST00000525435 APOBEC3GQ9HC16 384 aaKnown RBP13.23□□□□□ -0.29
CCS-202ENST00000525435 ABCB6Q9NP58 842 aa13.23□□□□□ -0.29
CCS-202ENST00000525435 MAN1C1Q9NR34 630 aa13.23□□□□□ -0.29
CCS-202ENST00000525435 THEGQ9P2T0 379 aa13.23□□□□□ -0.29
CCS-202ENST00000525435 BARX2Q9UMQ3 279 aaPredicted RBP13.23□□□□□ -0.29
CCS-202ENST00000525435 UNC80Q8N2C7 3258 aa13.23□□□□□ -0.29
CCS-202ENST00000525435 BRWD1Q9NSI6 2320 aa13.23□□□□□ -0.29
CCS-202ENST00000525435 BECN2A8MW95 431 aa13.22□□□□□ -0.29
CCS-202ENST00000525435 CDK11BP21127 795 aaKnown RBP13.22□□□□□ -0.29
CCS-202ENST00000525435 LMO2P25791 158 aa13.22□□□□□ -0.29
CCS-202ENST00000525435 CDH8P55286 799 aa13.22□□□□□ -0.29
CCS-202ENST00000525435 ARPP19P56211 112 aa13.22□□□□□ -0.29
CCS-202ENST00000525435 YWHAEP62258 255 aaKnown RBP13.22□□□□□ -0.29
CCS-202ENST00000525435 ADCY1Q08828 1119 aa13.22□□□□□ -0.29
CCS-202ENST00000525435 INCA1Q0VD86 236 aa13.22□□□□□ -0.29
CCS-202ENST00000525435 SMAD4Q13485 552 aaKnown RBP13.22□□□□□ -0.29
CCS-202ENST00000525435 INTS6LQ5JSJ4 861 aaKnown RBP13.22□□□□□ -0.29
CCS-202ENST00000525435 ATAT1Q5SQI0 421 aa13.22□□□□□ -0.29
CCS-202ENST00000525435 CES5AQ6NT32 575 aa13.22□□□□□ -0.29
CCS-202ENST00000525435 RNF19BQ6ZMZ0 732 aa13.22□□□□□ -0.29
CCS-202ENST00000525435 GBP6Q6ZN66 633 aa13.22□□□□□ -0.29
CCS-202ENST00000525435 ENOSF1Q7L5Y1 443 aa13.22□□□□□ -0.29
CCS-202ENST00000525435 LRRTM3Q86VH5 581 aa13.22□□□□□ -0.29
CCS-202ENST00000525435 OSTM1Q86WC4 334 aa13.22□□□□□ -0.29
CCS-202ENST00000525435 GLYCTKQ8IVS8 523 aa13.22□□□□□ -0.29
CCS-202ENST00000525435 SPPL2BQ8TCT7 592 aa13.22□□□□□ -0.29
CCS-202ENST00000525435 FUBP3Q96I24 572 aaKnown RBP eCLIP13.22□□□□□ -0.29
CCS-202ENST00000525435 CEP295NLQ96MC4 621 aa13.22□□□□□ -0.29
CCS-202ENST00000525435 NECTIN4Q96NY8 510 aa13.22□□□□□ -0.29
CCS-202ENST00000525435 NT5C1BQ96P26 610 aa13.22□□□□□ -0.29
CCS-202ENST00000525435 PKMYT1Q99640 499 aa13.22□□□□□ -0.29
CCS-202ENST00000525435 MRPL45Q9BRJ2 306 aaKnown RBP13.22□□□□□ -0.29
CCS-202ENST00000525435 LIMA1Q9UHB6 759 aaKnown RBP13.22□□□□□ -0.29
CCS-202ENST00000525435 POLIQ9UNA4 740 aa13.22□□□□□ -0.29
CCS-202ENST00000525435 A8MXQ7 604 aa13.21□□□□□ -0.29
CCS-202ENST00000525435 PRRG1O14668 218 aa13.21□□□□□ -0.29
CCS-202ENST00000525435 CLSTN1O94985 981 aa13.21□□□□□ -0.29
CCS-202ENST00000525435 C8AP07357 584 aa13.21□□□□□ -0.29
CCS-202ENST00000525435 PDGFRBP09619 1106 aa13.21□□□□□ -0.29
CCS-202ENST00000525435 WEE2P0C1S8 567 aa13.21□□□□□ -0.29
CCS-202ENST00000525435 SPATA31D3P0C874 917 aa13.21□□□□□ -0.29
CCS-202ENST00000525435 PTPN1P18031 435 aaKnown RBP13.21□□□□□ -0.29
CCS-202ENST00000525435 RBM10P98175 930 aaKnown RBP13.21□□□□□ -0.29
CCS-202ENST00000525435 GCNT1Q02742 428 aa13.21□□□□□ -0.29
CCS-202ENST00000525435 PLD1Q13393 1074 aa13.21□□□□□ -0.29
CCS-202ENST00000525435 CUL2Q13617 745 aa13.21□□□□□ -0.29
CCS-202ENST00000525435 IQCB1Q15051 598 aa13.21□□□□□ -0.29
CCS-202ENST00000525435 KRT31Q15323 416 aa13.21□□□□□ -0.29
CCS-202ENST00000525435 EXOC3L4Q17RC7 722 aa13.21□□□□□ -0.29
CCS-202ENST00000525435 CFAP221Q4G0U5 840 aa13.21□□□□□ -0.29
CCS-202ENST00000525435 SLC39A12Q504Y0 691 aa13.21□□□□□ -0.29
CCS-202ENST00000525435 MIIPQ5JXC2 388 aa13.21□□□□□ -0.29
CCS-202ENST00000525435 PPM1LQ5SGD2 360 aa13.21□□□□□ -0.29
CCS-202ENST00000525435 SPOPLQ6IQ16 392 aa13.21□□□□□ -0.29
CCS-202ENST00000525435 C4orf50Q6ZRC1 276 aa13.21□□□□□ -0.29
CCS-202ENST00000525435 SPATA31D4Q6ZUB0 917 aa13.21□□□□□ -0.29
CCS-202ENST00000525435 GPR149Q86SP6 731 aa13.21□□□□□ -0.29
CCS-202ENST00000525435 DHX40Q8IX18 779 aaKnown RBP13.21□□□□□ -0.29
CCS-202ENST00000525435 AOPEPQ8N6M6 819 aa13.21□□□□□ -0.29
CCS-202ENST00000525435 MYCBPAPQ8TBZ2 947 aa13.21□□□□□ -0.29
CCS-202ENST00000525435 SUSD6Q92537 303 aa13.21□□□□□ -0.29
CCS-202ENST00000525435 TATDN2Q93075 761 aa13.21□□□□□ -0.29
CCS-202ENST00000525435 RIPOR3Q96MK2 946 aa13.21□□□□□ -0.29
CCS-202ENST00000525435 SYT15Q9BQS2 421 aa13.21□□□□□ -0.29
CCS-202ENST00000525435 PRKD2Q9BZL6 878 aa13.21□□□□□ -0.29
CCS-202ENST00000525435 HSD3B7Q9H2F3 369 aa13.21□□□□□ -0.29
CCS-202ENST00000525435 SMYD3Q9H7B4 428 aa13.21□□□□□ -0.29
CCS-202ENST00000525435 CYP4F11Q9HBI6 524 aa13.21□□□□□ -0.29
CCS-202ENST00000525435 PCDHB5Q9Y5E4 795 aa13.21□□□□□ -0.29
CCS-202ENST00000525435 VWA8A3KMH1 1905 aa13.21□□□□□ -0.3
CCS-202ENST00000525435 CCDC195A0A1B0GUA6 201 aa13.2□□□□□ -0.3
CCS-202ENST00000525435 MTMR11A4FU01 709 aa13.2□□□□□ -0.3
CCS-202ENST00000525435 GRXCR2A6NFK2 248 aa13.2□□□□□ -0.3
CCS-202ENST00000525435 SPDYE4A6NLX3 237 aa13.2□□□□□ -0.3
CCS-202ENST00000525435 H3BQ06 376 aaPredicted RBP13.2□□□□□ -0.3
CCS-202ENST00000525435 XYLBO75191 536 aa13.2□□□□□ -0.3
CCS-202ENST00000525435 LRRN2O75325 713 aa13.2□□□□□ -0.3
CCS-202ENST00000525435 OR4Q2P0C623 313 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms