RNA–Protein interactions for RNA: ENST00000525211.5

CD44-214, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 747 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-214ENST00000525211 SLC38A7Q9NVC3 462 aa6.96□□□□□ -1.3
CD44-214ENST00000525211 MAGEC2Q9UBF1 373 aaPredicted RBP6.96□□□□□ -1.3
CD44-214ENST00000525211 SNX9Q9Y5X1 595 aa6.96□□□□□ -1.3
CD44-214ENST00000525211 FHOD1Q9Y613 1164 aa6.96□□□□□ -1.3
CD44-214ENST00000525211 PRRC2BQ5JSZ5 2229 aaKnown RBP6.95□□□□□ -1.3
CD44-214ENST00000525211 A0A1W2PPC1 479 aa6.95□□□□□ -1.3
CD44-214ENST00000525211 CLDN5O00501 218 aa6.95□□□□□ -1.3
CD44-214ENST00000525211 PES1O00541 588 aaKnown RBP6.95□□□□□ -1.3
CD44-214ENST00000525211 GABRDO14764 452 aa6.95□□□□□ -1.3
CD44-214ENST00000525211 PER2O15055 1255 aa6.95□□□□□ -1.3
CD44-214ENST00000525211 LINC01565O15544 149 aa6.95□□□□□ -1.3
CD44-214ENST00000525211 SOAT2O75908 522 aa6.95□□□□□ -1.3
CD44-214ENST00000525211 FGFR1OPO95684 399 aaKnown RBP6.95□□□□□ -1.3
CD44-214ENST00000525211 CXCL14O95715 111 aa6.95□□□□□ -1.3
CD44-214ENST00000525211 STAU1O95793 577 aaKnown RBP6.95□□□□□ -1.3
CD44-214ENST00000525211 SOD2P04179 222 aa6.95□□□□□ -1.3
CD44-214ENST00000525211 CYP11A1P05108 521 aa6.95□□□□□ -1.3
CD44-214ENST00000525211 CNPP09543 421 aaKnown RBP6.95□□□□□ -1.3
CD44-214ENST00000525211 PDGFRBP09619 1106 aa6.95□□□□□ -1.3
CD44-214ENST00000525211 CDK11BP21127 795 aaKnown RBP6.95□□□□□ -1.3
CD44-214ENST00000525211 CACNA2D1P54289 1103 aa6.95□□□□□ -1.3
CD44-214ENST00000525211 TRPC3Q13507 836 aa6.95□□□□□ -1.3
CD44-214ENST00000525211 PTPN14Q15678 1187 aa6.95□□□□□ -1.3
CD44-214ENST00000525211 ZNF699Q32M78 642 aa6.95□□□□□ -1.3
CD44-214ENST00000525211 WDR72Q3MJ13 1102 aa6.95□□□□□ -1.3
CD44-214ENST00000525211 KLHDC7AQ5VTJ3 777 aa6.95□□□□□ -1.3
CD44-214ENST00000525211 TRIM65Q6PJ69 517 aa6.95□□□□□ -1.3
CD44-214ENST00000525211 DSTYKQ6XUX3 929 aa6.95□□□□□ -1.3
CD44-214ENST00000525211 FAM114A1Q8IWE2 563 aa6.95□□□□□ -1.3
CD44-214ENST00000525211 OLIG1Q8TAK6 271 aa6.95□□□□□ -1.3
CD44-214ENST00000525211 MYLIPQ8WY64 445 aa6.95□□□□□ -1.3
CD44-214ENST00000525211 RIN2Q8WYP3 895 aaPredicted RBP6.95□□□□□ -1.3
CD44-214ENST00000525211 UROC1Q96N76 676 aa6.95□□□□□ -1.3
CD44-214ENST00000525211 GUCD1Q96NT3 240 aa6.95□□□□□ -1.3
CD44-214ENST00000525211 TSPAN18Q96SJ8 248 aa6.95□□□□□ -1.3
CD44-214ENST00000525211 PKMYT1Q99640 499 aa6.95□□□□□ -1.3
CD44-214ENST00000525211 CLSTN3Q9BQT9 956 aa6.95□□□□□ -1.3
CD44-214ENST00000525211 NAA15Q9BXJ9 866 aaKnown RBP6.95□□□□□ -1.3
CD44-214ENST00000525211 NAT10Q9H0A0 1025 aaKnown RBP6.95□□□□□ -1.3
CD44-214ENST00000525211 VRTNQ9H8Y1 702 aa6.95□□□□□ -1.3
CD44-214ENST00000525211 CRTAC1Q9NQ79 661 aa6.95□□□□□ -1.3
CD44-214ENST00000525211 GDAP2Q9NXN4 497 aa6.95□□□□□ -1.3
CD44-214ENST00000525211 GCNT4Q9P109 453 aa6.95□□□□□ -1.3
CD44-214ENST00000525211 CDH22Q9UJ99 828 aa6.95□□□□□ -1.3
CD44-214ENST00000525211 PCDHB12Q9Y5F1 795 aa6.95□□□□□ -1.3
CD44-214ENST00000525211 MYBPHLA2RUH7 354 aa6.94□□□□□ -1.3
CD44-214ENST00000525211 C2orf71A6NGG8 1288 aa6.94□□□□□ -1.3
CD44-214ENST00000525211 CFAP99D6REC4 459 aa6.94□□□□□ -1.3
CD44-214ENST00000525211 FOXN3O00409 490 aaPredicted RBP6.94□□□□□ -1.3
CD44-214ENST00000525211 TEX28O15482 410 aa6.94□□□□□ -1.3
CD44-214ENST00000525211 XPOTO43592 962 aaKnown RBP6.94□□□□□ -1.3
CD44-214ENST00000525211 SEC24AO95486 1093 aa6.94□□□□□ -1.3
CD44-214ENST00000525211 SERPINC1P01008 464 aa6.94□□□□□ -1.3
CD44-214ENST00000525211 SPATA31D3P0C874 917 aa6.94□□□□□ -1.3
CD44-214ENST00000525211 CTSAP10619 480 aa6.94□□□□□ -1.3
CD44-214ENST00000525211 CD58P19256 250 aa6.94□□□□□ -1.3
CD44-214ENST00000525211 WARSP23381 471 aaKnown RBP6.94□□□□□ -1.3
CD44-214ENST00000525211 GPR15P49685 360 aa6.94□□□□□ -1.3
CD44-214ENST00000525211 NDST1P52848 882 aa6.94□□□□□ -1.3
CD44-214ENST00000525211 AP3M2P53677 418 aa6.94□□□□□ -1.3
CD44-214ENST00000525211 UBASH3AP57075 661 aa6.94□□□□□ -1.3
CD44-214ENST00000525211 PSMC1P62191 440 aaKnown RBP6.94□□□□□ -1.3
CD44-214ENST00000525211 DSG1Q02413 1049 aa6.94□□□□□ -1.3
CD44-214ENST00000525211 UBXN1Q04323 297 aa6.94□□□□□ -1.3
CD44-214ENST00000525211 ARID5BQ14865 1188 aa6.94□□□□□ -1.3
CD44-214ENST00000525211 ARHGAP44Q17R89 818 aa6.94□□□□□ -1.3
CD44-214ENST00000525211 EXOC3L4Q17RC7 722 aa6.94□□□□□ -1.3
CD44-214ENST00000525211 SGSM1Q2NKQ1 1148 aa6.94□□□□□ -1.3
CD44-214ENST00000525211 SV2CQ496J9 727 aa6.94□□□□□ -1.3
CD44-214ENST00000525211 ZNF394Q53GI3 561 aa6.94□□□□□ -1.3
CD44-214ENST00000525211 ZNF667Q5HYK9 610 aa6.94□□□□□ -1.3
CD44-214ENST00000525211 RNF19BQ6ZMZ0 732 aa6.94□□□□□ -1.3
CD44-214ENST00000525211 GBP6Q6ZN66 633 aa6.94□□□□□ -1.3
CD44-214ENST00000525211 SPATA31D4Q6ZUB0 917 aa6.94□□□□□ -1.3
CD44-214ENST00000525211 PAQR9Q6ZVX9 377 aa6.94□□□□□ -1.3
CD44-214ENST00000525211 RBM23Q86U06 439 aaKnown RBP6.94□□□□□ -1.3
CD44-214ENST00000525211 ADGRF2Q8IZF7 708 aa6.94□□□□□ -1.3
CD44-214ENST00000525211 C12orf29Q8N999 325 aa6.94□□□□□ -1.3
CD44-214ENST00000525211 TFAP2BQ92481 460 aa6.94□□□□□ -1.3
CD44-214ENST00000525211 BAP1Q92560 729 aa6.94□□□□□ -1.3
CD44-214ENST00000525211 WNT2BQ93097 391 aa6.94□□□□□ -1.3
CD44-214ENST00000525211 TMEM169Q96HH4 297 aa6.94□□□□□ -1.3
CD44-214ENST00000525211 PGLYRP2Q96PD5 576 aa6.94□□□□□ -1.3
CD44-214ENST00000525211 KLHL5Q96PQ7 755 aa6.94□□□□□ -1.3
CD44-214ENST00000525211 ERGIC2Q96RQ1 377 aa6.94□□□□□ -1.3
CD44-214ENST00000525211 MMS19Q96T76 1030 aa6.94□□□□□ -1.3
CD44-214ENST00000525211 TCF25Q9BQ70 676 aa6.94□□□□□ -1.3
CD44-214ENST00000525211 TTPALQ9BTX7 342 aa6.94□□□□□ -1.3
CD44-214ENST00000525211 KRTAP3-3Q9BYR6 98 aa6.94□□□□□ -1.3
CD44-214ENST00000525211 KRTAP3-2Q9BYR7 98 aa6.94□□□□□ -1.3
CD44-214ENST00000525211 TTYH3Q9C0H2 523 aa6.94□□□□□ -1.3
CD44-214ENST00000525211 NIF3L1Q9GZT8 377 aa6.94□□□□□ -1.3
CD44-214ENST00000525211 UBE2TQ9NPD8 197 aaPredicted RBP6.94□□□□□ -1.3
CD44-214ENST00000525211 NLRC4Q9NPP4 1024 aa6.94□□□□□ -1.3
CD44-214ENST00000525211 FAM207AQ9NSI2 230 aaPredicted RBP6.94□□□□□ -1.3
CD44-214ENST00000525211 FBXL5Q9UKA1 691 aa6.94□□□□□ -1.3
CD44-214ENST00000525211 DNAJC12Q9UKB3 198 aa6.94□□□□□ -1.3
CD44-214ENST00000525211 TRANK1O15050 2925 aa6.93□□□□□ -1.3
CD44-214ENST00000525211 WDR27A2RRH5 827 aa6.93□□□□□ -1.3
CD44-214ENST00000525211 GOLGA6L19H0YKK7 550 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms