RNA–Protein interactions for RNA: ENST00000524277.1

SPARC-206, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 505 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-206ENST00000524277 AMPD2Q01433 879 aa12.77□□□□□ -0.37
SPARC-206ENST00000524277 CRELD2Q6UXH1 353 aaPredicted RBP12.77□□□□□ -0.37
SPARC-206ENST00000524277 STXBP4Q6ZWJ1 553 aa12.77□□□□□ -0.37
SPARC-206ENST00000524277 BRSK2Q8IWQ3 736 aa12.77□□□□□ -0.37
SPARC-206ENST00000524277 TMEM86AQ8N2M4 240 aa12.77□□□□□ -0.37
SPARC-206ENST00000524277 LRRC52Q8N7C0 313 aa12.77□□□□□ -0.37
SPARC-206ENST00000524277 BPIFB1Q8TDL5 484 aa12.77□□□□□ -0.37
SPARC-206ENST00000524277 DNAJC19Q96DA6 116 aa12.77□□□□□ -0.37
SPARC-206ENST00000524277 INTS4Q96HW7 963 aaKnown RBP12.77□□□□□ -0.37
SPARC-206ENST00000524277 TMEM209Q96SK2 561 aa12.77□□□□□ -0.37
SPARC-206ENST00000524277 MKNK1Q9BUB5 465 aa12.77□□□□□ -0.37
SPARC-206ENST00000524277 ZSCAN16Q9H4T2 348 aaPredicted RBP12.77□□□□□ -0.37
SPARC-206ENST00000524277 UXTQ9UBK9 157 aaPredicted RBP12.77□□□□□ -0.37
SPARC-206ENST00000524277 FBXO2Q9UK22 296 aaPredicted RBP12.77□□□□□ -0.37
SPARC-206ENST00000524277 PCDHB5Q9Y5E4 795 aa12.77□□□□□ -0.37
SPARC-206ENST00000524277 PATJQ8NI35 1801 aa12.76□□□□□ -0.37
SPARC-206ENST00000524277 MYMKA6NI61 221 aa12.76□□□□□ -0.37
SPARC-206ENST00000524277 SPECC1L-ADORA2AF8WAN1 911 aa12.76□□□□□ -0.37
SPARC-206ENST00000524277 HUS1O60921 280 aa12.76□□□□□ -0.37
SPARC-206ENST00000524277 LRP3O75074 770 aa12.76□□□□□ -0.37
SPARC-206ENST00000524277 GCNT3O95395 438 aa12.76□□□□□ -0.37
SPARC-206ENST00000524277 CSH1P0DML2 217 aa12.76□□□□□ -0.37
SPARC-206ENST00000524277 CSH2P0DML3 217 aa12.76□□□□□ -0.37
SPARC-206ENST00000524277 TDGF1P13385 188 aa12.76□□□□□ -0.37
SPARC-206ENST00000524277 HOXA6P31267 233 aa12.76□□□□□ -0.37
SPARC-206ENST00000524277 LMNB2Q03252 620 aa12.76□□□□□ -0.37
SPARC-206ENST00000524277 SLC39A14Q15043 492 aa12.76□□□□□ -0.37
SPARC-206ENST00000524277 WSCD1Q658N2 575 aa12.76□□□□□ -0.37
SPARC-206ENST00000524277 SYCP3Q8IZU3 236 aa12.76□□□□□ -0.37
SPARC-206ENST00000524277 CMTM8Q8IZV2 173 aa12.76□□□□□ -0.37
SPARC-206ENST00000524277 TMEM130Q8N3G9 435 aa12.76□□□□□ -0.37
SPARC-206ENST00000524277 DCLK2Q8N568 766 aa12.76□□□□□ -0.37
SPARC-206ENST00000524277 LEO1Q8WVC0 666 aaPredicted RBP12.76□□□□□ -0.37
SPARC-206ENST00000524277 EXOC4Q96A65 974 aa12.76□□□□□ -0.37
SPARC-206ENST00000524277 ACBD6Q9BR61 282 aa12.76□□□□□ -0.37
SPARC-206ENST00000524277 KIF9Q9HAQ2 790 aa12.76□□□□□ -0.37
SPARC-206ENST00000524277 ABCB6Q9NP58 842 aa12.76□□□□□ -0.37
SPARC-206ENST00000524277 ITGA11Q9UKX5 1188 aa12.76□□□□□ -0.37
SPARC-206ENST00000524277 R3HCC1Q9Y3T6 440 aaKnown RBP12.76□□□□□ -0.37
SPARC-206ENST00000524277 DCHS1Q96JQ0 3298 aa12.75□□□□□ -0.37
SPARC-206ENST00000524277 FRMD3A2A2Y4 597 aa12.75□□□□□ -0.37
SPARC-206ENST00000524277 EXTL3O43909 919 aa12.75□□□□□ -0.37
SPARC-206ENST00000524277 FOXD2O60548 495 aaPredicted RBP12.75□□□□□ -0.37
SPARC-206ENST00000524277 ATF6P18850 670 aa12.75□□□□□ -0.37
SPARC-206ENST00000524277 SYT1P21579 422 aa12.75□□□□□ -0.37
SPARC-206ENST00000524277 CTHP32929 405 aa12.75□□□□□ -0.37
SPARC-206ENST00000524277 AVPR1AP37288 418 aa12.75□□□□□ -0.37
SPARC-206ENST00000524277 LHX1P48742 406 aa12.75□□□□□ -0.37
SPARC-206ENST00000524277 RPL10AP62906 217 aaKnown RBP12.75□□□□□ -0.37
SPARC-206ENST00000524277 RBP5P82980 135 aa12.75□□□□□ -0.37
SPARC-206ENST00000524277 TFAMQ00059 246 aaKnown RBP12.75□□□□□ -0.37
SPARC-206ENST00000524277 MYL7Q01449 175 aa12.75□□□□□ -0.37
SPARC-206ENST00000524277 RESTQ13127 1097 aa12.75□□□□□ -0.37
SPARC-206ENST00000524277 SURF1Q15526 300 aa12.75□□□□□ -0.37
SPARC-206ENST00000524277 ITPRIPL2Q3MIP1 535 aa12.75□□□□□ -0.37
SPARC-206ENST00000524277 STXBP5Q5T5C0 1151 aa12.75□□□□□ -0.37
SPARC-206ENST00000524277 LAIR1Q6GTX8 287 aa12.75□□□□□ -0.37
SPARC-206ENST00000524277 TSSK4Q6SA08 328 aa12.75□□□□□ -0.37
SPARC-206ENST00000524277 USP49Q70CQ1 688 aa12.75□□□□□ -0.37
SPARC-206ENST00000524277 LRRTM3Q86VH5 581 aa12.75□□□□□ -0.37
SPARC-206ENST00000524277 CCDC65Q8IXS2 484 aa12.75□□□□□ -0.37
SPARC-206ENST00000524277 EFCAB13Q8IY85 973 aa12.75□□□□□ -0.37
SPARC-206ENST00000524277 TTC9BQ8N6N2 239 aa12.75□□□□□ -0.37
SPARC-206ENST00000524277 RSPRY1Q96DX4 576 aa12.75□□□□□ -0.37
SPARC-206ENST00000524277 LPIN3Q9BQK8 851 aa12.75□□□□□ -0.37
SPARC-206ENST00000524277 FAM213AQ9BRX8 229 aa12.75□□□□□ -0.37
SPARC-206ENST00000524277 IL21Q9HBE4 155 aa12.75□□□□□ -0.37
SPARC-206ENST00000524277 GDAP2Q9NXN4 497 aa12.75□□□□□ -0.37
SPARC-206ENST00000524277 RBAKQ9NYW8 714 aaPredicted RBP12.75□□□□□ -0.37
SPARC-206ENST00000524277 DMXL1Q9Y485 3027 aa12.74□□□□□ -0.37
SPARC-206ENST00000524277 NCANO14594 1321 aa12.74□□□□□ -0.37
SPARC-206ENST00000524277 SLC38A8A6NNN8 435 aa12.74□□□□□ -0.37
SPARC-206ENST00000524277 TISP43B9A030 160 aa12.74□□□□□ -0.37
SPARC-206ENST00000524277 SOAT2O75908 522 aa12.74□□□□□ -0.37
SPARC-206ENST00000524277 RETP07949 1114 aa12.74□□□□□ -0.37
SPARC-206ENST00000524277 PDIA4P13667 645 aaKnown RBP12.74□□□□□ -0.37
SPARC-206ENST00000524277 IDEP14735 1019 aa12.74□□□□□ -0.37
SPARC-206ENST00000524277 PCSK1P29120 753 aa12.74□□□□□ -0.37
SPARC-206ENST00000524277 STAT6P42226 847 aa12.74□□□□□ -0.37
SPARC-206ENST00000524277 AMPD3Q01432 767 aa12.74□□□□□ -0.37
SPARC-206ENST00000524277 MYO1EQ12965 1108 aa12.74□□□□□ -0.37
SPARC-206ENST00000524277 ZNF268Q14587 947 aaPredicted RBP12.74□□□□□ -0.37
SPARC-206ENST00000524277 RSPO4Q2I0M5 234 aaPredicted RBP12.74□□□□□ -0.37
SPARC-206ENST00000524277 DPH6Q7L8W6 267 aa12.74□□□□□ -0.37
SPARC-206ENST00000524277 LONP2Q86WA8 852 aa12.74□□□□□ -0.37
SPARC-206ENST00000524277 CSGALNACT2Q8N6G5 542 aa12.74□□□□□ -0.37
SPARC-206ENST00000524277 TOP6BLQ8N6T0 577 aa12.74□□□□□ -0.37
SPARC-206ENST00000524277 MRPS31Q92665 395 aaKnown RBP12.74□□□□□ -0.37
SPARC-206ENST00000524277 FUBP3Q96I24 572 aaKnown RBP eCLIP12.74□□□□□ -0.37
SPARC-206ENST00000524277 CEP295NLQ96MC4 621 aa12.74□□□□□ -0.37
SPARC-206ENST00000524277 CLIC6Q96NY7 704 aa12.74□□□□□ -0.37
SPARC-206ENST00000524277 SLC46A2Q9BY10 475 aa12.74□□□□□ -0.37
SPARC-206ENST00000524277 CUEDC2Q9H467 287 aa12.74□□□□□ -0.37
SPARC-206ENST00000524277 KIAA1586Q9HCI6 787 aa12.74□□□□□ -0.37
SPARC-206ENST00000524277 PANK4Q9NVE7 773 aa12.74□□□□□ -0.37
SPARC-206ENST00000524277 ABI2Q9NYB9 513 aaPredicted RBP12.74□□□□□ -0.37
SPARC-206ENST00000524277 AGAP1Q9UPQ3 857 aa12.74□□□□□ -0.37
SPARC-206ENST00000524277 SCN1AP35498 2009 aa12.74□□□□□ -0.37
SPARC-206ENST00000524277 COL4A3Q01955 1670 aa12.73□□□□□ -0.37
SPARC-206ENST00000524277 ATG13O75143 517 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms