RNA–Protein interactions for RNA: ENST00000523952.5

PTPN12-216, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 4

Gene PTPN12, Length 500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-216ENST00000523952 STK36Q9NRP7 1315 aa10.13□□□□□ -0.79
PTPN12-216ENST00000523952 PATE3B3GLJ2 98 aa10.13□□□□□ -0.79
PTPN12-216ENST00000523952 H0Y626 953 aa10.13□□□□□ -0.79
PTPN12-216ENST00000523952 XPOTO43592 962 aaKnown RBP10.13□□□□□ -0.79
PTPN12-216ENST00000523952 MED24O75448 989 aa10.13□□□□□ -0.79
PTPN12-216ENST00000523952 REC8O95072 547 aa10.13□□□□□ -0.79
PTPN12-216ENST00000523952 TRIM16O95361 564 aa10.13□□□□□ -0.79
PTPN12-216ENST00000523952 MCF2P10911 925 aa10.13□□□□□ -0.79
PTPN12-216ENST00000523952 U2AF2P26368 475 aaKnown RBP eCLIP10.13□□□□□ -0.797e-8■■■■□ 23.7
PTPN12-216ENST00000523952 TUFMP49411 452 aaKnown RBP10.13□□□□□ -0.79
PTPN12-216ENST00000523952 GALK1P51570 392 aa10.13□□□□□ -0.79
PTPN12-216ENST00000523952 PEX3P56589 373 aa10.13□□□□□ -0.79
PTPN12-216ENST00000523952 IRX6P78412 446 aaPredicted RBP10.13□□□□□ -0.79
PTPN12-216ENST00000523952 IRX4P78413 519 aa10.13□□□□□ -0.79
PTPN12-216ENST00000523952 STRN3Q13033 797 aa10.13□□□□□ -0.79
PTPN12-216ENST00000523952 NR5A1Q13285 461 aa10.13□□□□□ -0.79
PTPN12-216ENST00000523952 DMP1Q13316 513 aaPredicted RBP10.13□□□□□ -0.79
PTPN12-216ENST00000523952 TRIM29Q14134 588 aa10.13□□□□□ -0.79
PTPN12-216ENST00000523952 MGAT5BQ3V5L5 792 aa10.13□□□□□ -0.79
PTPN12-216ENST00000523952 TRIM61Q5EBN2 209 aa10.13□□□□□ -0.79
PTPN12-216ENST00000523952 XKR4Q5GH76 650 aa10.13□□□□□ -0.79
PTPN12-216ENST00000523952 EARS2Q5JPH6 523 aaKnown RBP10.13□□□□□ -0.79
PTPN12-216ENST00000523952 PMS2CLQ68D20 193 aa10.13□□□□□ -0.79
PTPN12-216ENST00000523952 LMBRD2Q68DH5 695 aaPredicted RBP10.13□□□□□ -0.79
PTPN12-216ENST00000523952 TRIM68Q6AZZ1 485 aa10.13□□□□□ -0.79
PTPN12-216ENST00000523952 OVOS1Q6IE37 1185 aa10.13□□□□□ -0.79
PTPN12-216ENST00000523952 CENPPQ6IPU0 288 aa10.13□□□□□ -0.79
PTPN12-216ENST00000523952 C19orf48Q6RUI8 117 aa10.13□□□□□ -0.79
PTPN12-216ENST00000523952 MPZL3Q6UWV2 235 aa10.13□□□□□ -0.79
PTPN12-216ENST00000523952 CPA6Q8N4T0 437 aa10.13□□□□□ -0.79
PTPN12-216ENST00000523952 SPACA7Q96KW9 195 aa10.13□□□□□ -0.79
PTPN12-216ENST00000523952 DRC1Q96MC2 740 aa10.13□□□□□ -0.79
PTPN12-216ENST00000523952 KIF9Q9HAQ2 790 aa10.13□□□□□ -0.79
PTPN12-216ENST00000523952 POLD4Q9HCU8 107 aa10.13□□□□□ -0.79
PTPN12-216ENST00000523952 GJB4Q9NTQ9 266 aa10.13□□□□□ -0.79
PTPN12-216ENST00000523952 POLR3BQ9NW08 1133 aaPredicted RBP10.13□□□□□ -0.79
PTPN12-216ENST00000523952 EBF1Q9UH73 591 aa10.13□□□□□ -0.79
PTPN12-216ENST00000523952 IGSF10Q6WRI0 2623 aa10.13□□□□□ -0.79
PTPN12-216ENST00000523952 TP53BP1Q12888 1972 aaPredicted RBP10.12□□□□□ -0.79
PTPN12-216ENST00000523952 SPAARA0A1B0GVQ0 90 aa10.12□□□□□ -0.79
PTPN12-216ENST00000523952 MTMR11A4FU01 709 aa10.12□□□□□ -0.79
PTPN12-216ENST00000523952 CDX4O14627 284 aaPredicted RBP10.12□□□□□ -0.79
PTPN12-216ENST00000523952 SOAT2O75908 522 aa10.12□□□□□ -0.79
PTPN12-216ENST00000523952 ALDH1A2O94788 518 aa10.12□□□□□ -0.79
PTPN12-216ENST00000523952 OAZ2O95190 189 aa10.12□□□□□ -0.79
PTPN12-216ENST00000523952 SPATA31C1P0DKV0 1188 aa10.12□□□□□ -0.79
PTPN12-216ENST00000523952 WEE1P30291 646 aa10.12□□□□□ -0.79
PTPN12-216ENST00000523952 MYBPC2Q14324 1141 aa10.12□□□□□ -0.79
PTPN12-216ENST00000523952 PDGFRLQ15198 375 aa10.12□□□□□ -0.79
PTPN12-216ENST00000523952 HAUS3Q68CZ6 603 aa10.12□□□□□ -0.79
PTPN12-216ENST00000523952 ANO7Q6IWH7 933 aa10.12□□□□□ -0.79
PTPN12-216ENST00000523952 PDZD3Q86UT5 571 aa10.12□□□□□ -0.79
PTPN12-216ENST00000523952 CMTM8Q8IZV2 173 aa10.12□□□□□ -0.79
PTPN12-216ENST00000523952 MAB21L3Q8N8X9 362 aa10.12□□□□□ -0.79
PTPN12-216ENST00000523952 ATAD1Q8NBU5 361 aa10.12□□□□□ -0.79
PTPN12-216ENST00000523952 BEST2Q8NFU1 509 aa10.12□□□□□ -0.79
PTPN12-216ENST00000523952 CD101Q93033 1021 aa10.12□□□□□ -0.79
PTPN12-216ENST00000523952 LPIN3Q9BQK8 851 aa10.12□□□□□ -0.79
PTPN12-216ENST00000523952 POLR3CQ9BUI4 534 aaPredicted RBP10.12□□□□□ -0.79
PTPN12-216ENST00000523952 TARS2Q9BW92 718 aaKnown RBP10.12□□□□□ -0.79
PTPN12-216ENST00000523952 CRISPLD1Q9H336 500 aa10.12□□□□□ -0.79
PTPN12-216ENST00000523952 KMT5AQ9NQR1 393 aa10.12□□□□□ -0.79
PTPN12-216ENST00000523952 ORC3Q9UBD5 711 aaPredicted RBP10.12□□□□□ -0.79
PTPN12-216ENST00000523952 TUBGCP4Q9UGJ1 667 aa10.12□□□□□ -0.79
PTPN12-216ENST00000523952 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.12□□□□□ -0.79
PTPN12-216ENST00000523952 CACNA1EQ15878 2313 aa10.12□□□□□ -0.79
PTPN12-216ENST00000523952 ACACAQ13085 2346 aa10.11□□□□□ -0.79
PTPN12-216ENST00000523952 M0QZQ0 153 aa10.11□□□□□ -0.79
PTPN12-216ENST00000523952 CFIP05156 583 aa10.11□□□□□ -0.79
PTPN12-216ENST00000523952 ODC1P11926 461 aa10.11□□□□□ -0.79
PTPN12-216ENST00000523952 ARSAP15289 507 aa10.11□□□□□ -0.79
PTPN12-216ENST00000523952 DDX6P26196 483 aaKnown RBP eCLIP10.11□□□□□ -0.795e-10■■□□□ 14
PTPN12-216ENST00000523952 RPA1P27694 616 aa10.11□□□□□ -0.79
PTPN12-216ENST00000523952 MCM7P33993 719 aa10.11□□□□□ -0.79
PTPN12-216ENST00000523952 CCT6AP40227 531 aaKnown RBP10.11□□□□□ -0.79
PTPN12-216ENST00000523952 DPP6P42658 865 aa10.11□□□□□ -0.79
PTPN12-216ENST00000523952 IFNAR2P48551 515 aa10.11□□□□□ -0.79
PTPN12-216ENST00000523952 PPP2R3AQ06190 1150 aa10.11□□□□□ -0.79
PTPN12-216ENST00000523952 NR1H3Q13133 447 aa10.11□□□□□ -0.79
PTPN12-216ENST00000523952 NOLC1Q14978 699 aaKnown RBP eCLIP10.11□□□□□ -0.79
PTPN12-216ENST00000523952 ARMCX6Q7L4S7 300 aa10.11□□□□□ -0.79
PTPN12-216ENST00000523952 LPCAT2Q7L5N7 544 aa10.11□□□□□ -0.79
PTPN12-216ENST00000523952 PROSER1Q86XN7 944 aa10.11□□□□□ -0.79
PTPN12-216ENST00000523952 GIPC2Q8TF65 315 aa10.11□□□□□ -0.79
PTPN12-216ENST00000523952 MRPS31Q92665 395 aaKnown RBP10.11□□□□□ -0.79
PTPN12-216ENST00000523952 CHFRQ96EP1 664 aa10.11□□□□□ -0.79
PTPN12-216ENST00000523952 FAM83CQ9BQN1 747 aa10.11□□□□□ -0.79
PTPN12-216ENST00000523952 GTPBP2Q9BX10 602 aaKnown RBP10.11□□□□□ -0.79
PTPN12-216ENST00000523952 SLC46A2Q9BY10 475 aa10.11□□□□□ -0.79
PTPN12-216ENST00000523952 BHMT2Q9H2M3 363 aa10.11□□□□□ -0.79
PTPN12-216ENST00000523952 TMEM134Q9H6X4 195 aa10.11□□□□□ -0.79
PTPN12-216ENST00000523952 HPS4Q9NQG7 708 aa10.11□□□□□ -0.79
PTPN12-216ENST00000523952 PDRG1Q9NUG6 133 aa10.11□□□□□ -0.79
PTPN12-216ENST00000523952 TDP1Q9NUW8 608 aa10.11□□□□□ -0.79
PTPN12-216ENST00000523952 BCCIPQ9P287 314 aaKnown RBP eCLIP10.11□□□□□ -0.79
PTPN12-216ENST00000523952 HSFX1Q9UBD0 423 aa10.11□□□□□ -0.79
PTPN12-216ENST00000523952 EVLQ9UI08 416 aaPredicted RBP10.11□□□□□ -0.79
PTPN12-216ENST00000523952 PCDHB9Q9Y5E1 797 aa10.11□□□□□ -0.79
PTPN12-216ENST00000523952 MEFVO15553 781 aaPredicted RBP10.1□□□□□ -0.79
PTPN12-216ENST00000523952 VNN2O95498 520 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms