RNA–Protein interactions for RNA: ENST00000523950.5

VEGFA-225, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 954 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-225ENST00000523950 PMM2O15305 246 aa13.44□□□□□ -0.26
VEGFA-225ENST00000523950 N4BP1O75113 896 aaKnown RBP13.44□□□□□ -0.26
VEGFA-225ENST00000523950 SEC24AO95486 1093 aa13.44□□□□□ -0.26
VEGFA-225ENST00000523950 HLA-DRAP01903 254 aa13.44□□□□□ -0.26
VEGFA-225ENST00000523950 OR4Q2P0C623 313 aa13.44□□□□□ -0.26
VEGFA-225ENST00000523950 CCDC192P0DO97 292 aa13.44□□□□□ -0.26
VEGFA-225ENST00000523950 ERCC5P28715 1186 aaPredicted RBP13.44□□□□□ -0.26
VEGFA-225ENST00000523950 TUFMP49411 452 aaKnown RBP13.44□□□□□ -0.26
VEGFA-225ENST00000523950 MAPRE1Q15691 268 aaKnown RBP13.44□□□□□ -0.26
VEGFA-225ENST00000523950 CCDC40Q4G0X9 1142 aa13.44□□□□□ -0.26
VEGFA-225ENST00000523950 SLC39A12Q504Y0 691 aa13.44□□□□□ -0.26
VEGFA-225ENST00000523950 DCAF17Q5H9S7 520 aaPredicted RBP13.44□□□□□ -0.26
VEGFA-225ENST00000523950 CCDC183Q5T5S1 534 aa13.44□□□□□ -0.26
VEGFA-225ENST00000523950 TCERG1LQ5VWI1 586 aa13.44□□□□□ -0.26
VEGFA-225ENST00000523950 OTOP3Q7RTS5 596 aa13.44□□□□□ -0.26
VEGFA-225ENST00000523950 OSTM1Q86WC4 334 aa13.44□□□□□ -0.26
VEGFA-225ENST00000523950 ELMOD1Q8N336 334 aa13.44□□□□□ -0.26
VEGFA-225ENST00000523950 PLCD3Q8N3E9 789 aa13.44□□□□□ -0.26
VEGFA-225ENST00000523950 LEMD2Q8NC56 503 aa13.44□□□□□ -0.26
VEGFA-225ENST00000523950 KBTBD7Q8WVZ9 684 aa13.44□□□□□ -0.26
VEGFA-225ENST00000523950 SNX25Q9H3E2 840 aa13.44□□□□□ -0.26
VEGFA-225ENST00000523950 FAM124BQ9H5Z6 455 aaPredicted RBP13.44□□□□□ -0.26
VEGFA-225ENST00000523950 ABCB6Q9NP58 842 aa13.44□□□□□ -0.26
VEGFA-225ENST00000523950 AVENQ9NQS1 362 aaPredicted RBP13.44□□□□□ -0.26
VEGFA-225ENST00000523950 NXF1Q9UBU9 619 aaKnown RBP13.44□□□□□ -0.26
VEGFA-225ENST00000523950 YIPF1Q9Y548 306 aa13.44□□□□□ -0.26
VEGFA-225ENST00000523950 P4HA2O15460 535 aa13.43□□□□□ -0.26
VEGFA-225ENST00000523950 CCL16O15467 120 aa13.43□□□□□ -0.26
VEGFA-225ENST00000523950 CLSTN1O94985 981 aa13.43□□□□□ -0.26
VEGFA-225ENST00000523950 WEE2P0C1S8 567 aa13.43□□□□□ -0.26
VEGFA-225ENST00000523950 SSTR3P32745 418 aaPredicted RBP13.43□□□□□ -0.26
VEGFA-225ENST00000523950 ALDH1A3P47895 512 aa13.43□□□□□ -0.26
VEGFA-225ENST00000523950 STX17P56962 302 aa13.43□□□□□ -0.26
VEGFA-225ENST00000523950 DUSP4Q13115 394 aa13.43□□□□□ -0.26
VEGFA-225ENST00000523950 IQCEQ6IPM2 695 aa13.43□□□□□ -0.26
VEGFA-225ENST00000523950 ZDHHC14Q8IZN3 488 aa13.43□□□□□ -0.26
VEGFA-225ENST00000523950 TDRD5Q8NAT2 981 aaKnown RBP13.43□□□□□ -0.26
VEGFA-225ENST00000523950 FBXL13Q8NEE6 735 aa13.43□□□□□ -0.26
VEGFA-225ENST00000523950 TAS1R2Q8TE23 839 aa13.43□□□□□ -0.26
VEGFA-225ENST00000523950 SLC35C1Q96A29 364 aa13.43□□□□□ -0.26
VEGFA-225ENST00000523950 ACSF2Q96CM8 615 aaPredicted RBP13.43□□□□□ -0.26
VEGFA-225ENST00000523950 FUBP3Q96I24 572 aaKnown RBP eCLIP13.43□□□□□ -0.26
VEGFA-225ENST00000523950 PGLYRP2Q96PD5 576 aa13.43□□□□□ -0.26
VEGFA-225ENST00000523950 TMEM209Q96SK2 561 aa13.43□□□□□ -0.26
VEGFA-225ENST00000523950 PKMYT1Q99640 499 aa13.43□□□□□ -0.26
VEGFA-225ENST00000523950 SYT15Q9BQS2 421 aa13.43□□□□□ -0.26
VEGFA-225ENST00000523950 MMRN2Q9H8L6 949 aa13.43□□□□□ -0.26
VEGFA-225ENST00000523950 CDH22Q9UJ99 828 aa13.43□□□□□ -0.26
VEGFA-225ENST00000523950 COQ4Q9Y3A0 265 aa13.43□□□□□ -0.26
VEGFA-225ENST00000523950 ASB3Q9Y575 518 aa13.43□□□□□ -0.26
VEGFA-225ENST00000523950 PCDHB5Q9Y5E4 795 aa13.43□□□□□ -0.26
VEGFA-225ENST00000523950 ZFP37Q9Y6Q3 630 aaPredicted RBP13.43□□□□□ -0.26
VEGFA-225ENST00000523950 TNFRSF10AO00220 468 aa13.42□□□□□ -0.26
VEGFA-225ENST00000523950 VNN2O95498 520 aa13.42□□□□□ -0.26
VEGFA-225ENST00000523950 PTPN2P17706 415 aa13.42□□□□□ -0.26
VEGFA-225ENST00000523950 TRIM21P19474 475 aaKnown RBP13.42□□□□□ -0.26
VEGFA-225ENST00000523950 GNL1P36915 607 aaPredicted RBP13.42□□□□□ -0.26
VEGFA-225ENST00000523950 EPHB3P54753 998 aa13.42□□□□□ -0.26
VEGFA-225ENST00000523950 NOP14P78316 857 aaKnown RBP13.42□□□□□ -0.26
VEGFA-225ENST00000523950 TWF1Q12792 350 aa13.42□□□□□ -0.26
VEGFA-225ENST00000523950 CETN1Q12798 172 aa13.42□□□□□ -0.26
VEGFA-225ENST00000523950 DPCR1Q3MIW9 517 aa13.42□□□□□ -0.26
VEGFA-225ENST00000523950 CFAP221Q4G0U5 840 aa13.42□□□□□ -0.26
VEGFA-225ENST00000523950 FAM171BQ6P995 826 aa13.42□□□□□ -0.26
VEGFA-225ENST00000523950 C4orf50Q6ZRC1 276 aa13.42□□□□□ -0.26
VEGFA-225ENST00000523950 GRASPQ7Z6J2 395 aaPredicted RBP13.42□□□□□ -0.26
VEGFA-225ENST00000523950 ITIH5Q86UX2 942 aa13.42□□□□□ -0.26
VEGFA-225ENST00000523950 LRRTM3Q86VH5 581 aa13.42□□□□□ -0.26
VEGFA-225ENST00000523950 TTC39CQ8N584 583 aa13.42□□□□□ -0.26
VEGFA-225ENST00000523950 ATAD1Q8NBU5 361 aa13.42□□□□□ -0.26
VEGFA-225ENST00000523950 OR6B3Q8NGW1 331 aa13.42□□□□□ -0.26
VEGFA-225ENST00000523950 RPGRIP1Q96KN7 1286 aa13.42□□□□□ -0.26
VEGFA-225ENST00000523950 ZNF512Q96ME7 567 aaPredicted RBP13.42□□□□□ -0.26
VEGFA-225ENST00000523950 NECAB3Q96P71 396 aaPredicted RBP13.42□□□□□ -0.26
VEGFA-225ENST00000523950 MRPL45Q9BRJ2 306 aaKnown RBP13.42□□□□□ -0.26
VEGFA-225ENST00000523950 SRRTQ9BXP5 876 aaKnown RBP13.42□□□□□ -0.26
VEGFA-225ENST00000523950 DNAI2Q9GZS0 605 aa13.42□□□□□ -0.26
VEGFA-225ENST00000523950 NIF3L1Q9GZT8 377 aa13.42□□□□□ -0.26
VEGFA-225ENST00000523950 CYP3A43Q9HB55 503 aa13.42□□□□□ -0.26
VEGFA-225ENST00000523950 RAB20Q9NX57 234 aa13.42□□□□□ -0.26
VEGFA-225ENST00000523950 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.42□□□□□ -0.264e-7■■■■■ 28.5
VEGFA-225ENST00000523950 POLIQ9UNA4 740 aa13.42□□□□□ -0.26
VEGFA-225ENST00000523950 PTPRDP23468 1912 aa13.41□□□□□ -0.26
VEGFA-225ENST00000523950 A8MXQ7 604 aa13.41□□□□□ -0.26
VEGFA-225ENST00000523950 ZNF197O14709 1029 aa13.41□□□□□ -0.26
VEGFA-225ENST00000523950 MICAL2O94851 1124 aa13.41□□□□□ -0.26
VEGFA-225ENST00000523950 HAPLN1P10915 354 aaPredicted RBP13.41□□□□□ -0.26
VEGFA-225ENST00000523950 PRKCSHP14314 528 aaPredicted RBP13.41□□□□□ -0.26
VEGFA-225ENST00000523950 FSHRP23945 695 aa13.41□□□□□ -0.26
VEGFA-225ENST00000523950 ACAT1P24752 427 aaKnown RBP13.41□□□□□ -0.26
VEGFA-225ENST00000523950 DEKP35659 375 aaKnown RBP13.41□□□□□ -0.26
VEGFA-225ENST00000523950 FMO5P49326 533 aa13.41□□□□□ -0.26
VEGFA-225ENST00000523950 EPHA5P54756 1037 aa13.41□□□□□ -0.26
VEGFA-225ENST00000523950 VEPH1Q14D04 833 aa13.41□□□□□ -0.26
VEGFA-225ENST00000523950 TPD52L1Q16890 204 aaPredicted RBP13.41□□□□□ -0.26
VEGFA-225ENST00000523950 MGAT5BQ3V5L5 792 aa13.41□□□□□ -0.26
VEGFA-225ENST00000523950 CBWD6Q4V339 395 aa13.41□□□□□ -0.26
VEGFA-225ENST00000523950 PABPC1LQ4VXU2 614 aaKnown RBP13.41□□□□□ -0.26
VEGFA-225ENST00000523950 WDR44Q5JSH3 913 aa13.41□□□□□ -0.26
VEGFA-225ENST00000523950 CBWD3Q5JTY5 395 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms